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PDB: 33 件

7BXV
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11A1 antibody-peptide complex
分子名称: 1,2-ETHANEDIOL, Fab of the 11A1 antibody H chain, Fab of the 11A1 antibody L chain, ...
著者Irie, K, Irie, Y, Kita, A, Miki, K.
登録日2020-04-21
公開日2021-04-21
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献APOE epsilon 4 allele advances the age-dependent decline of amyloid beta clearance in the human cortex.
Biorxiv, 2022
7Y3J
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24B3 antibody-peptide complex
分子名称: 24B3 Heavy chain, 24B3 Light chain, ALA-LEU-VAL-PHE-PHE-ALA-PRO-ALA-VAL-GLY-SER
著者Irie, K, Irie, Y, Kita, A, Miki, K.
登録日2022-06-11
公開日2022-08-17
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural basis of the 24B3 antibody against the toxic conformer of amyloid beta with a turn at positions 22 and 23.
Biochem.Biophys.Res.Commun., 621, 2022
1I2H
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CRYSTAL STRUCTURE ANALYSIS OF PSD-ZIP45(HOMER1C/VESL-1L)CONSERVED HOMER 1 DOMAIN
分子名称: PSD-ZIP45(HOMER-1C/VESL-1L)
著者Irie, K, Nakatsu, T, Mitsuoka, K, Fujiyoshi, Y, Kato, H.
登録日2001-02-09
公開日2002-05-29
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal Structure of the Homer 1 Family Conserved Region Reveals the Interaction Between the EVH1 Domain and Own Proline-rich Motif
J.Mol.Biol., 318, 2002
7C7H
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Crystal structures of AKR1C3 ternary complex with NADP+ and the chromene derivative 2l
分子名称: 2-azanylidene-N-(3-ethylphenyl)-8-oxidanyl-chromene-3-carboxamide, Aldo-keto reductase family 1 member C3, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Irie, K, Toyooka, N, Endo, S.
登録日2020-05-25
公開日2020-09-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Development of Novel AKR1C3 Inhibitors as New Potential Treatment for Castration-Resistant Prostate Cancer.
J.Med.Chem., 63, 2020
7C7F
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Crystal structures of AKR1C3 binary complex with NADP+
分子名称: 1,2-ETHANEDIOL, ACETATE ION, Aldo-keto reductase family 1 member C3, ...
著者Irie, K, Toyooka, N, Endo, S.
登録日2020-05-25
公開日2020-09-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Development of Novel AKR1C3 Inhibitors as New Potential Treatment for Castration-Resistant Prostate Cancer.
J.Med.Chem., 63, 2020
7C7G
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Crystal structures of AKR1C3 ternary complex with NADP+ and the chromene derivative 2j
分子名称: 2-azanylidene-N-(4-methylphenyl)-8-oxidanyl-chromene-3-carboxamide, Aldo-keto reductase family 1 member C3, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Irie, K, Toyooka, N, Endo, S.
登録日2020-05-25
公開日2020-09-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Development of Novel AKR1C3 Inhibitors as New Potential Treatment for Castration-Resistant Prostate Cancer.
J.Med.Chem., 63, 2020
8H9O
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Crystal structure of voltage-gated sodium channel NavAb N49K mutant in sodium ion condition
分子名称: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, CHAPSO, DODECYL-BETA-D-MALTOSIDE, ...
著者Irie, K.
登録日2022-10-25
公開日2023-07-26
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献The structural basis of divalent cation block in a tetrameric prokaryotic sodium channel.
Nat Commun, 14, 2023
8H9W
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Crystal structure of voltage-gated sodium channel NavAb N49K mutant in calcium ion condition
分子名称: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, CALCIUM ION, CHAPSO, ...
著者Irie, K.
登録日2022-10-25
公開日2023-07-26
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献The structural basis of divalent cation block in a tetrameric prokaryotic sodium channel.
Nat Commun, 14, 2023
8HA2
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Crystal structure of voltage-gated sodium channel NavAb N49K/L176G mutant in calcium ion condition
分子名称: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, CALCIUM ION, CHAPSO, ...
著者Irie, K, Oda, Y.
登録日2022-10-26
公開日2023-07-26
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献The structural basis of divalent cation block in a tetrameric prokaryotic sodium channel.
Nat Commun, 14, 2023
8H9X
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Crystal structure of voltage-gated sodium channel NavAb N49K/L176Q mutant in sodium ion condition
分子名称: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, CHAPSO, DODECYL-BETA-D-MALTOSIDE, ...
著者Irie, K, Oda, Y.
登録日2022-10-25
公開日2023-07-26
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献The structural basis of divalent cation block in a tetrameric prokaryotic sodium channel.
Nat Commun, 14, 2023
8H9Y
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Crystal structure of voltage-gated sodium channel NavAb N49K/L176Q mutant in calcium ion condition
分子名称: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, CALCIUM ION, CHAPSO, ...
著者Irie, K, Oda, Y.
登録日2022-10-25
公開日2023-07-26
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献The structural basis of divalent cation block in a tetrameric prokaryotic sodium channel.
Nat Commun, 14, 2023
8HA1
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Crystal structure of voltage-gated sodium channel NavAb N49K/L176G mutant in sodium ion condition
分子名称: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, CHAPSO, DODECYL-BETA-D-MALTOSIDE, ...
著者Irie, K, Oda, Y.
登録日2022-10-26
公開日2023-07-26
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献The structural basis of divalent cation block in a tetrameric prokaryotic sodium channel.
Nat Commun, 14, 2023
5YUB
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Crystal structure of voltage-gated sodium channel NavAb E32Q mutant
分子名称: CALCIUM ION, CHAPSO, DODECYL-BETA-D-MALTOSIDE, ...
著者Irie, K, Shimomura, T, Fujiyoshi, Y.
登録日2017-11-21
公開日2017-12-27
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.40004 Å)
主引用文献Structural insight on the voltage dependence of prokaryotic voltage gated sodium channel NavAb.
FEBS Lett., 2017
5YUA
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Crystal structure of voltage-gated sodium channel NavAb in high-pH condition
分子名称: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, CALCIUM ION, CHAPSO, ...
著者Irie, K, Shimomura, T, Fujiyoshi, Y.
登録日2017-11-21
公開日2017-12-27
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.80085564 Å)
主引用文献Structural insight on the voltage dependence of prokaryotic voltage gated sodium channel NavAb.
FEBS Lett., 2017
5YUC
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BU of 5yuc by Molmil
Crystal structure of voltage-gated sodium channel NavAb N49K mutant
分子名称: CALCIUM ION, CHAPSO, DODECYL-BETA-D-MALTOSIDE, ...
著者Irie, K, Shimomura, T, Fujiyoshi, Y.
登録日2017-11-21
公開日2017-12-27
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.40099168 Å)
主引用文献Structural insight on the voltage dependence of prokaryotic voltage gated sodium channel NavAb.
FEBS Lett., 2017
3VOU
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The crystal structure of NaK-NavSulP chimera channel
分子名称: COBALT (II) ION, Ion transport 2 domain protein, Voltage-gated sodium channel, ...
著者Irie, K, Shimomura, T, Fujiyoshi, Y.
登録日2012-02-10
公開日2012-05-02
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献The C-terminal helical bundle of the tetrameric prokaryotic sodium channel accelerates the inactivation rate
Nat Commun, 3, 2012
6LKN
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Crystal structure of ATP11C-CDC50A in PtdSer-bound E2P state
分子名称: 1-deoxy-alpha-D-mannopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, Cell cycle control protein 50A, ...
著者Abe, K, Irie, K, Nakanishi, H, Hasegawa, K.
登録日2019-12-19
公開日2020-06-10
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.9 Å)
主引用文献Crystal structure of a human plasma membrane phospholipid flippase.
J.Biol.Chem., 295, 2020
7E6P
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Fab-amyloid beta fragment complex
分子名称: 1,2-ETHANEDIOL, Amyloid beta fragment with an intramolecular disulfide bond at positions 17 and 28, DI(HYDROXYETHYL)ETHER, ...
著者Kita, A, Irie, K, Irie, Y, Miki, K.
登録日2021-02-23
公開日2022-01-05
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Characterization of a Conformation-Restricted Amyloid beta Peptide and Immunoreactivity of Its Antibody in Human AD brain.
Acs Chem Neurosci, 12, 2021
8H8Q
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Fab-amyloid beta fragment complex at neutral pH
分子名称: CHLORIDE ION, Fab, GLN-LYS-CYS-VAL-PHE-PHE-ALA-GLU-ASP-VAL-GLY-SER-ASN-CYS-GLY, ...
著者Kita, A, Irie, K, Irie, Y, Matsushima, Y, Miki, K.
登録日2022-10-24
公開日2023-10-25
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Fab-amyloid beta fragment complex at neutral pH
To Be Published
4BGN
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BU of 4bgn by Molmil
cryo-EM structure of the NavCt voltage-gated sodium channel
分子名称: VOLTAGE-GATED SODIUM CHANNEL
著者Tsai, C.J, Tani, K, Irie, K, Hiroaki, Y, Shimomura, T, Mcmillan, D.G, Cook, G.M, Schertler, G, Fujiyoshi, Y, Li, X.D.
登録日2013-03-28
公開日2013-07-10
最終更新日2023-12-20
実験手法ELECTRON CRYSTALLOGRAPHY (9 Å)
主引用文献Two Alternative Conformations of a Voltage-Gated Sodium Channel.
J.Mol.Biol., 425, 2013
6AKF
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Crystal structure of mouse claudin-3 P134A mutant in complex with C-terminal fragment of Clostridium perfringens enterotoxin
分子名称: Claudin-3, Heat-labile enterotoxin B chain
著者Nakamura, S, Irie, K, Fujiyoshi, Y.
登録日2018-08-31
公開日2019-02-20
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.9 Å)
主引用文献Morphologic determinant of tight junctions revealed by claudin-3 structures.
Nat Commun, 10, 2019
6AKG
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Crystal structure of mouse claudin-3 P134G mutant in complex with C-terminal fragment of Clostridium perfringens enterotoxin
分子名称: Claudin-3, Heat-labile enterotoxin B chain
著者Nakamura, S, Irie, K, Fujiyoshi, Y.
登録日2018-08-31
公開日2019-02-20
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (4.3 Å)
主引用文献Morphologic determinant of tight junctions revealed by claudin-3 structures.
Nat Commun, 10, 2019
6AKE
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Crystal structure of mouse claudin-3 in complex with C-terminal fragment of Clostridium perfringens enterotoxin
分子名称: Claudin-3, Heat-labile enterotoxin B chain
著者Nakamura, S, Irie, K, Fujiyoshi, Y.
登録日2018-08-31
公開日2019-02-27
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Morphologic determinant of tight junctions revealed by claudin-3 structures.
Nat Commun, 10, 2019
6JXH
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K+-bound E2-MgF state of the gastric proton pump (Tyr799Trp)
分子名称: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL, ...
著者Abe, K, Irie, K.
登録日2019-04-23
公開日2019-08-14
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献A single K + -binding site in the crystal structure of the gastric proton pump.
Elife, 8, 2019
6JXK
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Rb+-bound E2-MgF state of the gastric proton pump (Wild-type)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL, MAGNESIUM ION, ...
著者Abe, K, Irie, K, Yamamoto, K.
登録日2019-04-23
公開日2019-08-14
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (4.3 Å)
主引用文献A single K + -binding site in the crystal structure of the gastric proton pump.
Elife, 8, 2019

 

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