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PDB: 232 results

4EFN
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BU of 4efn by Molmil
Crystal structure of H-Ras Q61L in complex with GppNHp (state 1)
Descriptor: GTPase HRas, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
Authors:Muraoka, S, Shima, F, Araki, M, Inoue, T, Yoshimoto, A, Ijiri, Y, Seki, N, Tamura, A, Kumasaka, T, Yamamoto, M, Kataoka, T.
Deposit date:2012-03-30
Release date:2012-05-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structures of the state 1 conformations of the GTP-bound H-Ras protein and its oncogenic G12V and Q61L mutants
Febs Lett., 586, 2012
4EFM
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BU of 4efm by Molmil
Crystal structure of H-Ras G12V in complex with GppNHp (state 1)
Descriptor: GTPase HRas, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
Authors:Muraoka, S, Shima, F, Araki, M, Inoue, T, Yoshimoto, A, Ijiri, Y, Seki, N, Tamura, A, Kumasaka, T, Yamamoto, M, Kataoka, T.
Deposit date:2012-03-30
Release date:2012-05-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structures of the state 1 conformations of the GTP-bound H-Ras protein and its oncogenic G12V and Q61L mutants
Febs Lett., 586, 2012
7X6H
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BU of 7x6h by Molmil
Outer membrane lipoprotein QseG of Escherichia coli O157:H7
Descriptor: Quorum-sensing regulator protein G
Authors:Matsumoto, K, Fukuda, Y, Inoue, T.
Deposit date:2022-03-07
Release date:2023-03-15
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structures of QseE and QseG: elements of a three-component system from Escherichia coli.
Acta Crystallogr.,Sect.F, 79, 2023
7X6G
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BU of 7x6g by Molmil
Outer membrane lipoprotein QseG of Escherichia coli O157:H7
Descriptor: Quorum-sensing regulator protein G
Authors:Matsumoto, K, Fukuda, Y, Inoue, T.
Deposit date:2022-03-07
Release date:2023-03-15
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal structures of QseE and QseG: elements of a three-component system from Escherichia coli.
Acta Crystallogr.,Sect.F, 79, 2023
7BXX
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BU of 7bxx by Molmil
Tetanus neurotoxin translocation domain -C467S
Descriptor: Tetanus toxin
Authors:Zhang, C.M, Imoto, Y, Fukuda, Y, Yamashita, E, Inoue, T.
Deposit date:2020-04-21
Release date:2021-02-17
Last modified:2023-11-29
Method:SOLUTION SCATTERING (2.34 Å), X-RAY DIFFRACTION
Cite:Structural flexibility of the tetanus neurotoxin revealed by crystallographic and solution scattering analyses.
J Struct Biol X, 5, 2021
7BY4
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BU of 7by4 by Molmil
Tetanus neurotoxin receptor binding domain
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLYCEROL, SODIUM ION, ...
Authors:Zhang, C.M, Imoto, Y, Inoue, T.
Deposit date:2020-04-21
Release date:2021-02-17
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural flexibility of the tetanus neurotoxin revealed by crystallographic and solution scattering analyses.
J Struct Biol X, 5, 2021
7BY5
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BU of 7by5 by Molmil
Tetanus neurotoxin mutant-(H233A/E234Q/H237A/Y375F)
Descriptor: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CHLORIDE ION, ...
Authors:Zhang, C.M, Imoto, Y, Fukuda, Y, Yamashita, E, Inoue, T.
Deposit date:2020-04-21
Release date:2021-02-17
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Structural flexibility of the tetanus neurotoxin revealed by crystallographic and solution scattering analyses.
J Struct Biol X, 5, 2021
4TKB
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BU of 4tkb by Molmil
The 0.86 angstrom X-ray structure of the human heart fatty acid-binding protein complexed with lauric acid
Descriptor: Fatty acid-binding protein, heart, HEXAETHYLENE GLYCOL, ...
Authors:Sugiyama, S, Matsuoka, S, Mizohata, E, Matsuoka, D, Ishida, H, Hirose, M, Kakinouchi, K, Hara, T, Murakami, S, Inoue, T, Murata, M.
Deposit date:2014-05-26
Release date:2015-01-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (0.86 Å)
Cite:Water-mediated recognition of simple alkyl chains by heart-type Fatty-Acid-binding protein
Angew.Chem.Int.Ed.Engl., 54, 2015
4TJZ
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BU of 4tjz by Molmil
The 0.87 angstrom X-ray structure of the human heart fatty acid-binding protein complexed with capric acid
Descriptor: DECANOIC ACID, Fatty acid-binding protein, heart, ...
Authors:Sugiyama, S, Matsuoka, S, Mizohata, E, Ishida, H, Hirose, M, Kakinouchi, K, Hara, T, Murakami, S, Inoue, T, Murata, M.
Deposit date:2014-05-25
Release date:2015-01-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (0.87 Å)
Cite:Water-mediated recognition of simple alkyl chains by heart-type Fatty-Acid-binding protein
Angew.Chem.Int.Ed.Engl., 54, 2015
4TKH
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BU of 4tkh by Molmil
The 0.93 angstrom X-ray structure of the human heart fatty acid-binding protein complexed with myristic acid
Descriptor: Fatty acid-binding protein, heart, HEXAETHYLENE GLYCOL, ...
Authors:Sugiyama, S, Matsuoka, S, Mizohata, E, Matsuoka, D, Ishida, H, Hirose, M, Kakinouchi, K, Hara, T, Murakami, S, Inoue, T, Murata, M.
Deposit date:2014-05-26
Release date:2015-01-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (0.93 Å)
Cite:Water-mediated recognition of simple alkyl chains by heart-type Fatty-Acid-binding protein
Angew.Chem.Int.Ed.Engl., 54, 2015
4TKJ
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BU of 4tkj by Molmil
The 0.87 angstrom X-ray structure of the human heart fatty acid-binding protein complexed with palmitic acid
Descriptor: 2-amino-2-deoxy-6-O-phosphono-alpha-D-glucopyranose, Fatty acid-binding protein, heart, ...
Authors:Sugiyama, S, Matsuoka, S, Mizohata, E, Matsuoka, D, Ishida, H, Hirose, M, Kakinouchi, K, Hara, T, Murakami, S, Inoue, T, Murata, M.
Deposit date:2014-05-26
Release date:2015-01-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (0.87 Å)
Cite:Water-mediated recognition of simple alkyl chains by heart-type Fatty-Acid-binding protein
Angew.Chem.Int.Ed.Engl., 54, 2015
2NVL
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BU of 2nvl by Molmil
Crystal structure of archaeal peroxiredoxin, thioredoxin peroxidase from Aeropyrum pernix K1 (sulfonic acid form)
Descriptor: Probable peroxiredoxin
Authors:Nakamura, T, Yamamoto, T, Abe, M, Matsumura, H, Hagihara, Y, Goto, T, Yamaguchi, T, Inoue, T.
Deposit date:2006-11-13
Release date:2007-11-20
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Oxidation of archaeal peroxiredoxin involves a hypervalent sulfur intermediate
Proc.Natl.Acad.Sci.Usa, 105, 2008
7BWH
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BU of 7bwh by Molmil
Soluble cytochrome b5 from Ramazzottius varieornatus
Descriptor: CHLORIDE ION, Cytochrome b5 heme-binding domain-containing protein, PROTOPORPHYRIN IX CONTAINING FE
Authors:Kim, J, Inoue, T, Fukuda, Y.
Deposit date:2020-04-14
Release date:2020-06-10
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structure of cytochrome b5unique to tardigrades.
Protein Sci., 29, 2020
6M4U
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BU of 6m4u by Molmil
Crystal structure of FKBP-FRB T2098L mutant in complex with rapamycin
Descriptor: CHLORIDE ION, GLYCEROL, Peptidyl-prolyl cis-trans isomerase FKBP1A, ...
Authors:Kikuchi, M, Wu, D, Inoue, T, Umehara, T.
Deposit date:2020-03-09
Release date:2020-08-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Rational design and implementation of a chemically inducible heterotrimerization system.
Nat.Methods, 17, 2020
6LZY
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BU of 6lzy by Molmil
Structure of Phytolacca americana UGT3 with 18-crown-6
Descriptor: 1,2-ETHANEDIOL, 1,4,7,10,13,16-HEXAOXACYCLOOCTADECANE, BROMIDE ION, ...
Authors:Maharjan, R, Fukuda, Y, Nakayama, T, Nakayama, T, Hamada, H, Ozaki, S, Inoue, T.
Deposit date:2020-02-19
Release date:2020-06-10
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crown-ether-mediated crystal structures of the glycosyltransferase PaGT3 from Phytolacca americana.
Acta Crystallogr D Struct Biol, 76, 2020
7YPP
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BU of 7ypp by Molmil
Structural basis of a superoxide dismutase from a tardigrade, Ramazzottius varieornatus strain YOKOZUNA-1.
Descriptor: CALCIUM ION, COPPER (II) ION, Superoxide dismutase [Cu-Zn], ...
Authors:Sim, K.-S, Fukuda, Y, Inoue, T.
Deposit date:2022-08-04
Release date:2023-07-26
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of a superoxide dismutase from a tardigrade: Ramazzottius varieornatus strain YOKOZUNA-1.
Acta Crystallogr.,Sect.F, 79, 2023
7YPR
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BU of 7ypr by Molmil
Structural basis of a superoxide dismutase from a tardigrade, Ramazzottius varieornatus strain YOKOZUNA-1.
Descriptor: COPPER (II) ION, POTASSIUM ION, Superoxide dismutase [Cu-Zn], ...
Authors:Sim, K.-S, Fukuda, Y, Inoue, T.
Deposit date:2022-08-04
Release date:2023-12-06
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.101 Å)
Cite:Structure of a superoxide dismutase from a tardigrade: Ramazzottius varieornatus strain YOKOZUNA-1.
Acta Crystallogr.,Sect.F, 79, 2023
6M4V
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BU of 6m4v by Molmil
Crystal structure of MBP fused split FKBP in complex with rapamycin
Descriptor: GLYCEROL, Peptidyl-prolyl cis-trans isomerase FKBP1A, RAPAMYCIN IMMUNOSUPPRESSANT DRUG, ...
Authors:Kikuchi, M, Wu, D, Inoue, T, Umehara, T.
Deposit date:2020-03-09
Release date:2020-08-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.92 Å)
Cite:Rational design and implementation of a chemically inducible heterotrimerization system.
Nat.Methods, 17, 2020
6M4W
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BU of 6m4w by Molmil
Crystal structure of MBP fused split FKBP-FRB T2098L mutant in complex with rapamycin
Descriptor: GLYCEROL, Peptidyl-prolyl cis-trans isomerase FKBP1A, RAPAMYCIN IMMUNOSUPPRESSANT DRUG, ...
Authors:Kikuchi, M, Wu, D, Inoue, T, Umehara, T.
Deposit date:2020-03-09
Release date:2020-08-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.11 Å)
Cite:Rational design and implementation of a chemically inducible heterotrimerization system.
Nat.Methods, 17, 2020
6LZX
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BU of 6lzx by Molmil
Structure of Phytolacca americana UGT3 with 15-crown-5
Descriptor: 1,2-ETHANEDIOL, 1,4,7,10,13-pentaoxacyclopentadecane, BROMIDE ION, ...
Authors:Maharjan, R, Fukuda, Y, Nakayama, T, Nakayama, T, Hamada, H, Ozaki, S, Inoue, T.
Deposit date:2020-02-19
Release date:2020-06-10
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.101 Å)
Cite:Crown-ether-mediated crystal structures of the glycosyltransferase PaGT3 from Phytolacca americana.
Acta Crystallogr D Struct Biol, 76, 2020
6L46
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BU of 6l46 by Molmil
High-resolution neutron and X-ray joint refined structure of copper-containing nitrite reductase from Geobacillus thermodenitrificans
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, COPPER (II) ION, ...
Authors:Fukuda, Y, Hirano, Y, Kusaka, K, Inoue, T, Tamada, T.
Deposit date:2019-10-16
Release date:2020-02-12
Last modified:2024-04-03
Method:NEUTRON DIFFRACTION (1.3 Å), X-RAY DIFFRACTION
Cite:High-resolution neutron crystallography visualizes an OH-bound resting state of a copper-containing nitrite reductase.
Proc.Natl.Acad.Sci.USA, 117, 2020
8KCE
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BU of 8kce by Molmil
Structure of RvY_06210 at 1.05 angstrom resolution
Descriptor: MAGNESIUM ION, RvY_06210, ZINC ION
Authors:Kato, S, Fukuda, Y, Inoue, T.
Deposit date:2023-08-07
Release date:2024-08-07
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Metabolite phosphatase from anhydrobiotic tardigrades
To Be Published
8WAI
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BU of 8wai by Molmil
Structure of RvY_06210 at 1.45 angstrom resolution
Descriptor: 1,2-ETHANEDIOL, RvY_06210, ZINC ION
Authors:Kato, S, Fukuda, Y, Inoue, T.
Deposit date:2023-09-07
Release date:2024-09-11
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Metabolite phosphatase from anhydrobiotic tardigrades
To Be Published
8W9K
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BU of 8w9k by Molmil
Structure of apo RvY_06210
Descriptor: RvY_06210
Authors:Kato, S, Fukuda, Y, Inoue, T.
Deposit date:2023-09-05
Release date:2024-09-11
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Metabolite phosphatase from anhydrobiotic tardigrades
To Be Published
3KKQ
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BU of 3kkq by Molmil
Crystal structure of M-Ras P40D in complex with GDP
Descriptor: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Ras-related protein M-Ras
Authors:Muraoka, S, Shima, F, Liao, J, Ijiri, Y, Matsumoto, K, Ye, M, Inoue, T, Kataoka, T.
Deposit date:2009-11-06
Release date:2010-06-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structural basis for conformational dynamics of GTP-bound Ras protein
J.Biol.Chem., 285, 2010

226707

数据于2024-10-30公开中

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