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PDB: 232 件
3WJB
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Crystal structure of mutant nitrobindin M75L/H76L/Q96C/M148L/H158L (NB4) from Arabidopsis thaliana
分子名称: BARIUM ION, HEXAETHYLENE GLYCOL, UPF0678 fatty acid-binding protein-like protein At1g79260
著者Mizohata, E, Fukumoto, K, Onoda, A, Bocola, M, Arlt, M, Inoue, T, Schwaneberg, U, Hayashi, T.
登録日2013-10-08
公開日2014-04-09
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献A Rhodium Complex-linked Hybrid Biocatalyst: Stereo-controlled Phenylacetylene Polymerization within an Engineered Protein Cavity
CHEMCATCHEM, 2014
3WBG
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Structure of the human heart fatty acid-binding protein in complex with 1-anilinonaphtalene-8-sulphonic acid
分子名称: 8-ANILINO-1-NAPHTHALENE SULFONATE, Fatty acid-binding protein, heart
著者Hirose, M, Sugiyama, S, Ishida, H, Niiyama, M, Matsuoka, D, Hara, T, Sato, F, Mizohata, E, Murakami, S, Inoue, T, Matsuoka, S, Murata, M.
登録日2013-05-16
公開日2013-10-30
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structure of the human-heart fatty-acid-binding protein 3 in complex with the fluorescent probe 1-anilinonaphthalene-8-sulphonic acid
J.SYNCHROTRON RADIAT., 20, 2013
3WVM
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The 0.88 angstrom X-ray structure of the human heart fatty acid-binding protein complexed with stearic acid
分子名称: Fatty acid-binding protein, heart, HEXAETHYLENE GLYCOL, ...
著者Sugiyama, S, Matsuoka, S, Mizohata, E, Matsuoka, D, Ishida, H, Hirose, M, Kakinouchi, K, Hara, T, Matsumura, H, Murakami, S, Inoue, T, Murata, M.
登録日2014-05-25
公開日2015-01-28
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (0.88 Å)
主引用文献Water-mediated recognition of simple alkyl chains by heart-type fatty-acid-binding protein.
Angew.Chem.Int.Ed.Engl., 54, 2015
3WJF
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Crystal structure of mutant nitrobindin M75L/H76L/Q96C/V128W/M148L/H158L (NB9) from Arabidopsis thaliana
分子名称: UPF0678 fatty acid-binding protein-like protein At1g79260
著者Mizohata, E, Fukumoto, K, Onoda, A, Bocola, M, Arlt, M, Inoue, T, Schwaneberg, U, Hayashi, T.
登録日2013-10-08
公開日2014-04-02
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献A Rhodium Complex-linked Hybrid Biocatalyst: Stereo-controlled Phenylacetylene Polymerization within an Engineered Protein Cavity
CHEMCATCHEM, 2014
3WFU
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Crystal structure of horse heart myoglobin reconstituted with cobalt(I) tetradehydrocorrin
分子名称: (1R,19R) cobalt tetradehydrocorrin, (1S,19S) cobalt tetradehydrocorrin, Myoglobin, ...
著者Mizohata, E, Morita, Y, Oohora, K, Hirata, K, Ohbayashi, J, Inoue, T, Hisaeda, Y, Hayashi, T.
登録日2013-07-23
公開日2014-12-03
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Co(II)/Co(I) reduction-induced axial histidine-flipping in myoglobin reconstituted with a cobalt tetradehydrocorrin as a methionine synthase model.
Chem.Commun.(Camb.), 50, 2014
3WJG
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Crystal structure of mutant nitrobindin M75L/H76L/Q96C/M148W/H158L (NB10) from Arabidopsis thaliana
分子名称: GLYCEROL, UPF0678 fatty acid-binding protein-like protein At1g79260
著者Mizohata, E, Fukumoto, K, Onoda, A, Bocola, M, Arlt, M, Inoue, T, Schwaneberg, U, Hayashi, T.
登録日2013-10-08
公開日2014-04-02
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献A Rhodium Complex-linked Hybrid Biocatalyst: Stereo-controlled Phenylacetylene Polymerization within an Engineered Protein Cavity
CHEMCATCHEM, 2014
3WO8
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Crystal structure of the beta-N-acetylglucosaminidase from Thermotoga maritima
分子名称: Beta-N-acetylglucosaminidase
著者Mine, S, Kado, Y, Watanabe, M, Inoue, T, Ishikawa, K.
登録日2013-12-20
公開日2014-12-24
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.43 Å)
主引用文献The structure of hyperthermophilic beta-N-acetylglucosaminidase reveals a novel dimer architecture associated with the active site.
Febs J., 281, 2014
3X2S
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Crystal structure of pyrene-conjugated adenylate kinase
分子名称: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, MAGNESIUM ION, ...
著者Fujii, A, Sekiguchi, Y, Matsumura, H, Inoue, T, Chung, W.-S, Hirota, S, Matsuo, T.
登録日2014-12-31
公開日2015-04-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Excimer Emission Properties on Pyrene-Labeled Protein Surface: Correlation between Emission Spectra, Ring Stacking Modes, and Flexibilities of Pyrene Probes.
Bioconjug.Chem., 26, 2015
3WQT
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Staphylococcus aureus FtsA complexed with AMPPNP
分子名称: CHLORIDE ION, Cell division protein FtsA, MAGNESIUM ION, ...
著者Fujita, J, Maeda, Y, Miyazaki, Y, Inoue, T, Matsumura, H.
登録日2014-02-01
公開日2014-10-08
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of FtsA from Staphylococcus aureus
FEBS Lett., 588, 2014
3WKQ
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Copper-containing nitrite reductase from Geobacillus thermodenitrificans in complex with formate
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, COPPER (II) ION, ...
著者Fukuda, Y, Inoue, T.
登録日2013-10-29
公開日2013-12-11
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Copper-containing nitrite reductase from Geobacillus thermodenitrificans in complex with formate
to be published
3WNJ
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1.20 A resolution crystal structure of dioxygen bound copper-containing nitrite reductase from Geobacillus thermodenitrificans
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, ACETIC ACID, ...
著者Fukuda, Y, Inoue, T.
登録日2013-12-10
公開日2014-12-10
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Crystallographic evidence for side-on dioxygen trapped on type 2 copper in copper-containing nitrite reductase
To be Published
3VI7
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Human hematopoietic prostaglandin D synthase inhibitor complex structures
分子名称: CALCIUM ION, CIBACRON BLUE, GLUTATHIONE, ...
著者Kado, Y, Inoue, T.
登録日2011-09-21
公開日2012-04-18
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Human hematopoietic prostaglandin D synthase inhibitor complex structures
J.Biochem., 151, 2012
3VKW
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Crystal Structure of the Superfamily 1 Helicase from Tomato Mosaic Virus
分子名称: Replicase large subunit, SULFATE ION
著者Nishikiori, M, Sugiyama, S, Xiang, H, Niiyama, M, Ishibashi, K, Inoue, T, Ishikawa, M, Matsumura, H, Katoh, E.
登録日2011-11-22
公開日2012-07-11
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of the superfamily 1 helicase from tomato mosaic virus
J.Virol., 86, 2012
3VI5
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Human hematopoietic prostaglandin D synthase inhibitor complex structures
分子名称: 1-amino-9,10-dioxo-4-[(4-sulfamoylphenyl)amino]-9,10-dihydroanthracene-2-sulfonic acid, CALCIUM ION, GLUTATHIONE, ...
著者Kado, Y, Inoue, T.
登録日2011-09-21
公開日2012-04-18
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Human hematopoietic prostaglandin D synthase inhibitor complex structures
J.Biochem., 151, 2012
3WKP
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C135A mutant of Geobacillus thermodenitrificans copper-containing nitrite reductase in complex with nitrite
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, COPPER (II) ION, DI(HYDROXYETHYL)ETHER, ...
著者Fukuda, Y, Inoue, T.
登録日2013-10-29
公開日2013-12-11
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.901 Å)
主引用文献C135A mutant of Geobacillus thermodenitrificans copper-containing nitrite reductase in complex with nitrite
to be published
3WQU
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Staphylococcus aureus FtsA complexed with ATP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Cell division protein FtsA, MAGNESIUM ION
著者Fujita, J, Maeda, Y, Miyazaki, Y, Inoue, T, Matsumura, H.
登録日2014-02-01
公開日2014-10-08
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of FtsA from Staphylococcus aureus
FEBS Lett., 588, 2014
3WNI
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1.50 A resolution crystal structure of dioxygen bound copper-containing nitrite reductase from Geobacillus thermodenitrificans
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETIC ACID, COPPER (II) ION, ...
著者Fukuda, Y, Inoue, T.
登録日2013-12-10
公開日2014-12-10
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystallographic evidence for side-on dioxygen trapped on type 2 copper in copper-containing nitrite reductase
To be Published
3WR7
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Crystal Structure of Spermidine Acetyltransferase from Escherichia coli
分子名称: COENZYME A, SPERMIDINE, Spermidine N1-acetyltransferase
著者Sugiyama, S, Ishikawa, S, Tomitori, S, Niiyama, M, Hirose, M, Miyazaki, Y, Higashi, K, Adachi, H, Takano, K, Murakami, S, Inoue, T, Mori, Y, Kashiwagi, K, Igarashi, K, Matsumura, H.
登録日2014-02-20
公開日2015-09-02
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Molecular mechanism underlying promiscuous polyamine recognition by spermidine acetyltransferase
Int.J.Biochem.Cell Biol., 76, 2016
3X1G
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H294M mutant of copper-containing nitrite reductase from Geobacillus thermodenitrificans showing two coordination geometries at the T2Cu site
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETIC ACID, COPPER (II) ION, ...
著者Fukuda, Y, Inoue, T.
登録日2014-11-16
公開日2015-11-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Structural evidence of the flexibility of the CuM site
To be Published
3X1E
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Structure of copper-containing nitrite reductase from Geobacillus thermodenitrificans without chloride
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, COPPER (II) ION, Nitrite reductase, ...
著者Fukuda, Y, Inoue, T.
登録日2014-11-16
公開日2015-11-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Structural evidence of the flexibility of the CuM site
To be Published
3X1F
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H294M mutant of copper-containing nitrite reductase from Geobacillus thermodenitrificans
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETIC ACID, COPPER (II) ION, ...
著者Fukuda, Y, Inoue, T.
登録日2014-11-16
公開日2015-11-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Structural evidence of the flexibility of the CuM site
To be Published
3X1N
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Nitrite-bound thermostable copper nitrite reductase at 320 K
分子名称: COPPER (II) ION, NITRITE ION, Nitrite reductase
著者Fukuda, Y, Inoue, T.
登録日2014-11-25
公開日2015-01-21
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献High-temperature and high-resolution crystallography of thermostable copper nitrite reductase.
Chem.Commun.(Camb.), 51, 2015
2E2G
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Crystal structure of archaeal peroxiredoxin, thioredoxin peroxidase from Aeropyrum pernix K1 (pre-oxidation form)
分子名称: Probable peroxiredoxin
著者Nakamura, T, Yamamoto, T, Abe, M, Matsumura, H, Hagihara, Y, Goto, T, Yamaguchi, T, Inoue, T.
登録日2006-11-13
公開日2007-11-20
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Oxidation of archaeal peroxiredoxin involves a hypervalent sulfur intermediate
Proc.Natl.Acad.Sci.Usa, 105, 2008
2E2M
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Crystal structure of archaeal peroxiredoxin, thioredoxin peroxidase from Aeropyrum pernix K1 (sulfinic acid form)
分子名称: Probable peroxiredoxin
著者Nakamura, T, Yamamoto, T, Abe, M, Matsumura, H, Hagihara, Y, Goto, T, Yamaguchi, T, Inoue, T.
登録日2006-11-14
公開日2007-11-20
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Oxidation of archaeal peroxiredoxin involves a hypervalent sulfur intermediate
Proc.Natl.Acad.Sci.Usa, 105, 2008
2CW8
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Crystal structure of intein homing endonuclease II
分子名称: Endonuclease PI-PkoII, GLYCEROL, SULFATE ION
著者Matsumura, H, Takahashi, H, Inoue, T, Hashimoto, H, Nishioka, M, Fujiwara, S, Takagi, M, Imanaka, T, Kai, Y.
登録日2005-06-17
公開日2006-04-18
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of intein homing endonuclease II encoded in DNA polymerase gene from hyperthermophilic archaeon Thermococcus kodakaraensis strain KOD1
Proteins, 63, 2006

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