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PDB: 232 件

4EFN
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Crystal structure of H-Ras Q61L in complex with GppNHp (state 1)
分子名称: GTPase HRas, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
著者Muraoka, S, Shima, F, Araki, M, Inoue, T, Yoshimoto, A, Ijiri, Y, Seki, N, Tamura, A, Kumasaka, T, Yamamoto, M, Kataoka, T.
登録日2012-03-30
公開日2012-05-16
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structures of the state 1 conformations of the GTP-bound H-Ras protein and its oncogenic G12V and Q61L mutants
Febs Lett., 586, 2012
4EFM
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Crystal structure of H-Ras G12V in complex with GppNHp (state 1)
分子名称: GTPase HRas, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
著者Muraoka, S, Shima, F, Araki, M, Inoue, T, Yoshimoto, A, Ijiri, Y, Seki, N, Tamura, A, Kumasaka, T, Yamamoto, M, Kataoka, T.
登録日2012-03-30
公開日2012-05-16
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structures of the state 1 conformations of the GTP-bound H-Ras protein and its oncogenic G12V and Q61L mutants
Febs Lett., 586, 2012
7X6H
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BU of 7x6h by Molmil
Outer membrane lipoprotein QseG of Escherichia coli O157:H7
分子名称: Quorum-sensing regulator protein G
著者Matsumoto, K, Fukuda, Y, Inoue, T.
登録日2022-03-07
公開日2023-03-15
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structures of QseE and QseG: elements of a three-component system from Escherichia coli.
Acta Crystallogr.,Sect.F, 79, 2023
7X6G
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Outer membrane lipoprotein QseG of Escherichia coli O157:H7
分子名称: Quorum-sensing regulator protein G
著者Matsumoto, K, Fukuda, Y, Inoue, T.
登録日2022-03-07
公開日2023-03-15
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Crystal structures of QseE and QseG: elements of a three-component system from Escherichia coli.
Acta Crystallogr.,Sect.F, 79, 2023
7BXX
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Tetanus neurotoxin translocation domain -C467S
分子名称: Tetanus toxin
著者Zhang, C.M, Imoto, Y, Fukuda, Y, Yamashita, E, Inoue, T.
登録日2020-04-21
公開日2021-02-17
最終更新日2023-11-29
実験手法SOLUTION SCATTERING (2.34 Å), X-RAY DIFFRACTION
主引用文献Structural flexibility of the tetanus neurotoxin revealed by crystallographic and solution scattering analyses.
J Struct Biol X, 5, 2021
7BY4
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BU of 7by4 by Molmil
Tetanus neurotoxin receptor binding domain
分子名称: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLYCEROL, SODIUM ION, ...
著者Zhang, C.M, Imoto, Y, Inoue, T.
登録日2020-04-21
公開日2021-02-17
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural flexibility of the tetanus neurotoxin revealed by crystallographic and solution scattering analyses.
J Struct Biol X, 5, 2021
7BY5
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Tetanus neurotoxin mutant-(H233A/E234Q/H237A/Y375F)
分子名称: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CHLORIDE ION, ...
著者Zhang, C.M, Imoto, Y, Fukuda, Y, Yamashita, E, Inoue, T.
登録日2020-04-21
公開日2021-02-17
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.27 Å)
主引用文献Structural flexibility of the tetanus neurotoxin revealed by crystallographic and solution scattering analyses.
J Struct Biol X, 5, 2021
4TKB
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BU of 4tkb by Molmil
The 0.86 angstrom X-ray structure of the human heart fatty acid-binding protein complexed with lauric acid
分子名称: Fatty acid-binding protein, heart, HEXAETHYLENE GLYCOL, ...
著者Sugiyama, S, Matsuoka, S, Mizohata, E, Matsuoka, D, Ishida, H, Hirose, M, Kakinouchi, K, Hara, T, Murakami, S, Inoue, T, Murata, M.
登録日2014-05-26
公開日2015-01-28
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (0.86 Å)
主引用文献Water-mediated recognition of simple alkyl chains by heart-type Fatty-Acid-binding protein
Angew.Chem.Int.Ed.Engl., 54, 2015
4TJZ
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The 0.87 angstrom X-ray structure of the human heart fatty acid-binding protein complexed with capric acid
分子名称: DECANOIC ACID, Fatty acid-binding protein, heart, ...
著者Sugiyama, S, Matsuoka, S, Mizohata, E, Ishida, H, Hirose, M, Kakinouchi, K, Hara, T, Murakami, S, Inoue, T, Murata, M.
登録日2014-05-25
公開日2015-01-28
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (0.87 Å)
主引用文献Water-mediated recognition of simple alkyl chains by heart-type Fatty-Acid-binding protein
Angew.Chem.Int.Ed.Engl., 54, 2015
4TKH
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The 0.93 angstrom X-ray structure of the human heart fatty acid-binding protein complexed with myristic acid
分子名称: Fatty acid-binding protein, heart, HEXAETHYLENE GLYCOL, ...
著者Sugiyama, S, Matsuoka, S, Mizohata, E, Matsuoka, D, Ishida, H, Hirose, M, Kakinouchi, K, Hara, T, Murakami, S, Inoue, T, Murata, M.
登録日2014-05-26
公開日2015-01-28
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (0.93 Å)
主引用文献Water-mediated recognition of simple alkyl chains by heart-type Fatty-Acid-binding protein
Angew.Chem.Int.Ed.Engl., 54, 2015
4TKJ
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The 0.87 angstrom X-ray structure of the human heart fatty acid-binding protein complexed with palmitic acid
分子名称: 2-amino-2-deoxy-6-O-phosphono-alpha-D-glucopyranose, Fatty acid-binding protein, heart, ...
著者Sugiyama, S, Matsuoka, S, Mizohata, E, Matsuoka, D, Ishida, H, Hirose, M, Kakinouchi, K, Hara, T, Murakami, S, Inoue, T, Murata, M.
登録日2014-05-26
公開日2015-01-28
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (0.87 Å)
主引用文献Water-mediated recognition of simple alkyl chains by heart-type Fatty-Acid-binding protein
Angew.Chem.Int.Ed.Engl., 54, 2015
2NVL
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BU of 2nvl by Molmil
Crystal structure of archaeal peroxiredoxin, thioredoxin peroxidase from Aeropyrum pernix K1 (sulfonic acid form)
分子名称: Probable peroxiredoxin
著者Nakamura, T, Yamamoto, T, Abe, M, Matsumura, H, Hagihara, Y, Goto, T, Yamaguchi, T, Inoue, T.
登録日2006-11-13
公開日2007-11-20
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.36 Å)
主引用文献Oxidation of archaeal peroxiredoxin involves a hypervalent sulfur intermediate
Proc.Natl.Acad.Sci.Usa, 105, 2008
7BWH
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BU of 7bwh by Molmil
Soluble cytochrome b5 from Ramazzottius varieornatus
分子名称: CHLORIDE ION, Cytochrome b5 heme-binding domain-containing protein, PROTOPORPHYRIN IX CONTAINING FE
著者Kim, J, Inoue, T, Fukuda, Y.
登録日2020-04-14
公開日2020-06-10
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structure of cytochrome b5unique to tardigrades.
Protein Sci., 29, 2020
6M4U
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BU of 6m4u by Molmil
Crystal structure of FKBP-FRB T2098L mutant in complex with rapamycin
分子名称: CHLORIDE ION, GLYCEROL, Peptidyl-prolyl cis-trans isomerase FKBP1A, ...
著者Kikuchi, M, Wu, D, Inoue, T, Umehara, T.
登録日2020-03-09
公開日2020-08-26
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Rational design and implementation of a chemically inducible heterotrimerization system.
Nat.Methods, 17, 2020
6LZY
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BU of 6lzy by Molmil
Structure of Phytolacca americana UGT3 with 18-crown-6
分子名称: 1,2-ETHANEDIOL, 1,4,7,10,13,16-HEXAOXACYCLOOCTADECANE, BROMIDE ION, ...
著者Maharjan, R, Fukuda, Y, Nakayama, T, Nakayama, T, Hamada, H, Ozaki, S, Inoue, T.
登録日2020-02-19
公開日2020-06-10
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crown-ether-mediated crystal structures of the glycosyltransferase PaGT3 from Phytolacca americana.
Acta Crystallogr D Struct Biol, 76, 2020
7YPP
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BU of 7ypp by Molmil
Structural basis of a superoxide dismutase from a tardigrade, Ramazzottius varieornatus strain YOKOZUNA-1.
分子名称: CALCIUM ION, COPPER (II) ION, Superoxide dismutase [Cu-Zn], ...
著者Sim, K.-S, Fukuda, Y, Inoue, T.
登録日2022-08-04
公開日2023-07-26
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure of a superoxide dismutase from a tardigrade: Ramazzottius varieornatus strain YOKOZUNA-1.
Acta Crystallogr.,Sect.F, 79, 2023
7YPR
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BU of 7ypr by Molmil
Structural basis of a superoxide dismutase from a tardigrade, Ramazzottius varieornatus strain YOKOZUNA-1.
分子名称: COPPER (II) ION, POTASSIUM ION, Superoxide dismutase [Cu-Zn], ...
著者Sim, K.-S, Fukuda, Y, Inoue, T.
登録日2022-08-04
公開日2023-12-06
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.101 Å)
主引用文献Structure of a superoxide dismutase from a tardigrade: Ramazzottius varieornatus strain YOKOZUNA-1.
Acta Crystallogr.,Sect.F, 79, 2023
6M4V
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BU of 6m4v by Molmil
Crystal structure of MBP fused split FKBP in complex with rapamycin
分子名称: GLYCEROL, Peptidyl-prolyl cis-trans isomerase FKBP1A, RAPAMYCIN IMMUNOSUPPRESSANT DRUG, ...
著者Kikuchi, M, Wu, D, Inoue, T, Umehara, T.
登録日2020-03-09
公開日2020-08-26
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.92 Å)
主引用文献Rational design and implementation of a chemically inducible heterotrimerization system.
Nat.Methods, 17, 2020
6M4W
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BU of 6m4w by Molmil
Crystal structure of MBP fused split FKBP-FRB T2098L mutant in complex with rapamycin
分子名称: GLYCEROL, Peptidyl-prolyl cis-trans isomerase FKBP1A, RAPAMYCIN IMMUNOSUPPRESSANT DRUG, ...
著者Kikuchi, M, Wu, D, Inoue, T, Umehara, T.
登録日2020-03-09
公開日2020-08-26
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.11 Å)
主引用文献Rational design and implementation of a chemically inducible heterotrimerization system.
Nat.Methods, 17, 2020
6LZX
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Structure of Phytolacca americana UGT3 with 15-crown-5
分子名称: 1,2-ETHANEDIOL, 1,4,7,10,13-pentaoxacyclopentadecane, BROMIDE ION, ...
著者Maharjan, R, Fukuda, Y, Nakayama, T, Nakayama, T, Hamada, H, Ozaki, S, Inoue, T.
登録日2020-02-19
公開日2020-06-10
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.101 Å)
主引用文献Crown-ether-mediated crystal structures of the glycosyltransferase PaGT3 from Phytolacca americana.
Acta Crystallogr D Struct Biol, 76, 2020
6L46
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High-resolution neutron and X-ray joint refined structure of copper-containing nitrite reductase from Geobacillus thermodenitrificans
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, COPPER (II) ION, ...
著者Fukuda, Y, Hirano, Y, Kusaka, K, Inoue, T, Tamada, T.
登録日2019-10-16
公開日2020-02-12
最終更新日2024-04-03
実験手法NEUTRON DIFFRACTION (1.3 Å), X-RAY DIFFRACTION
主引用文献High-resolution neutron crystallography visualizes an OH-bound resting state of a copper-containing nitrite reductase.
Proc.Natl.Acad.Sci.USA, 117, 2020
8KCE
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BU of 8kce by Molmil
Structure of RvY_06210 at 1.05 angstrom resolution
分子名称: MAGNESIUM ION, RvY_06210, ZINC ION
著者Kato, S, Fukuda, Y, Inoue, T.
登録日2023-08-07
公開日2024-08-07
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献Metabolite phosphatase from anhydrobiotic tardigrades
To Be Published
8WAI
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Structure of RvY_06210 at 1.45 angstrom resolution
分子名称: 1,2-ETHANEDIOL, RvY_06210, ZINC ION
著者Kato, S, Fukuda, Y, Inoue, T.
登録日2023-09-07
公開日2024-09-11
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Metabolite phosphatase from anhydrobiotic tardigrades
To Be Published
8W9K
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Structure of apo RvY_06210
分子名称: RvY_06210
著者Kato, S, Fukuda, Y, Inoue, T.
登録日2023-09-05
公開日2024-09-11
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Metabolite phosphatase from anhydrobiotic tardigrades
To Be Published
3KKQ
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Crystal structure of M-Ras P40D in complex with GDP
分子名称: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Ras-related protein M-Ras
著者Muraoka, S, Shima, F, Liao, J, Ijiri, Y, Matsumoto, K, Ye, M, Inoue, T, Kataoka, T.
登録日2009-11-06
公開日2010-06-16
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Structural basis for conformational dynamics of GTP-bound Ras protein
J.Biol.Chem., 285, 2010

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