6IQM
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![BU of 6iqm by Molmil](/molmil-images/mine/6iqm) | Crystal Structure of Cell Surface Glyceraldehyde-3-Phosphate Dehydrogenase Complexed with NAD+ from Lactobacillus plantarum | Descriptor: | 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Glyceraldehyde-3-phosphate dehydrogenase, ... | Authors: | Yoneda, K, Kinoshita, H. | Deposit date: | 2018-11-08 | Release date: | 2018-11-21 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (1.85 Å) | Cite: | Crystal Structure of Cell Surface Glyceraldehyde-3-Phosphate Dehydrogenase from Lactobacillus plantarum: Insight into the Mercury Binding Mechanism Milk Sci, 68, 2019
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6IQV
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![BU of 6iqv by Molmil](/molmil-images/mine/6iqv) | Crystal Structure of Cell Surface Glyceraldehyde-3-Phosphate Dehydrogenase Complexed with Hg2+ from Lactobacillus plantarum | Descriptor: | 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Glyceraldehyde-3-phosphate dehydrogenase, ... | Authors: | Yoneda, K, Kinoshita, H. | Deposit date: | 2018-11-09 | Release date: | 2018-11-21 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (2.13 Å) | Cite: | Crystal Structure of Cell Surface Glyceraldehyde-3-Phosphate Dehydrogenase from Lactobacillus plantarum: Insight into the Mercury Binding Mechanism Milk Sci, 68, 2019
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5Y01
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![BU of 5y01 by Molmil](/molmil-images/mine/5y01) | Acid-tolerant monomeric GFP, Gamillus, non-fluorescence (OFF) state | Descriptor: | Green fluorescent protein, PHOSPHATE ION | Authors: | Nakashima, R, Sakurai, K, Shinoda, H, Matsuda, T, Nagai, T. | Deposit date: | 2017-07-14 | Release date: | 2018-01-17 | Last modified: | 2023-11-15 | Method: | X-RAY DIFFRACTION (2.65 Å) | Cite: | Acid-Tolerant Monomeric GFP from Olindias formosa. Cell Chem Biol, 25, 2018
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5Y00
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![BU of 5y00 by Molmil](/molmil-images/mine/5y00) | Acid-tolerant monomeric GFP, Gamillus, fluorescence (ON) state | Descriptor: | CHLORIDE ION, GLYCEROL, Green fluorescent protein, ... | Authors: | Nakashima, R, Sakurai, K, Shinoda, H, Matsuda, T, Nagai, T. | Deposit date: | 2017-07-14 | Release date: | 2018-01-17 | Last modified: | 2023-11-15 | Method: | X-RAY DIFFRACTION (1.6 Å) | Cite: | Acid-Tolerant Monomeric GFP from Olindias formosa. Cell Chem Biol, 25, 2018
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5B6F
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![BU of 5b6f by Molmil](/molmil-images/mine/5b6f) | Crystal structure of the Fab fragment of an anti-Leukotriene C4 monoclonal antibody complexed with LTC4 | Descriptor: | (5~{S},6~{R},7~{E},9~{E},11~{Z},14~{Z})-6-[(2~{R})-2-[[(4~{S})-4-azanyl-5-oxidanyl-5-oxidanylidene-pentanoyl]amino]-3-(2-hydroxy-2-oxoethylamino)-3-oxidanylidene-propyl]sulfanyl-5-oxidanyl-icosa-7,9,11,14-tetraenoic acid, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, SULFATE ION, ... | Authors: | Sugahara, M, Ago, H, Saino, H, Miyano, M. | Deposit date: | 2016-05-27 | Release date: | 2017-05-31 | Last modified: | 2019-07-24 | Method: | X-RAY DIFFRACTION (2.1 Å) | Cite: | Crystal structure of the Fab fragment of an anti-Leukotriene C4 monoclonal antibody complexed with LTC4 To Be Published
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5B6Q
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![BU of 5b6q by Molmil](/molmil-images/mine/5b6q) | Crystal structure of monomeric cytochrome c5 from Shewanella violacea | Descriptor: | HEME C, IMIDAZOLE, Soluble cytochrome cA | Authors: | Masanari, M, Fujii, S, Kawahara, K, Oki, H, Tsujino, H, Maruno, T, Kobayashi, Y, Ohkubo, T, Nishiyama, M, Harada, Y, Wakai, S, Sambongi, Y. | Deposit date: | 2016-06-01 | Release date: | 2016-10-19 | Last modified: | 2019-10-02 | Method: | X-RAY DIFFRACTION (1.78 Å) | Cite: | Comparative study on stabilization mechanism of monomeric cytochrome c5 from deep-sea piezophilic Shewanella violacea Biosci.Biotechnol.Biochem., 2016
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3A22
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![BU of 3a22 by Molmil](/molmil-images/mine/3a22) | Crystal Structure of beta-L-Arabinopyranosidase complexed with L-arabinose | Descriptor: | 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, GLYCEROL, ... | Authors: | Fujimoto, Z, Ichinose, H, Kaneko, S. | Deposit date: | 2009-04-27 | Release date: | 2009-07-14 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | A beta-l-Arabinopyranosidase from Streptomyces avermitilis is a novel member of glycoside hydrolase family 27. J.Biol.Chem., 284, 2009
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3A23
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![BU of 3a23 by Molmil](/molmil-images/mine/3a23) | Crystal Structure of beta-L-Arabinopyranosidase complexed with D-galactose | Descriptor: | 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, GLYCEROL, ... | Authors: | Fujimoto, Z, Ichinose, H, Kaneko, S. | Deposit date: | 2009-04-27 | Release date: | 2009-07-14 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | A beta-l-Arabinopyranosidase from Streptomyces avermitilis is a novel member of glycoside hydrolase family 27. J.Biol.Chem., 284, 2009
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6J1A
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![BU of 6j1a by Molmil](/molmil-images/mine/6j1a) | Photoswitchable fluorescent protein Gamillus, off-state | Descriptor: | CHLORIDE ION, GLYCEROL, Green fluorescent protein, ... | Authors: | Nakashima, R, Sakurai, K, shinoda, H, Matsuda, T, Nagai, T. | Deposit date: | 2018-12-28 | Release date: | 2019-11-06 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (1.96 Å) | Cite: | Acid-Tolerant Reversibly Switchable Green Fluorescent Protein for Super-resolution Imaging under Acidic Conditions. Cell Chem Biol, 26, 2019
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6KRN
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![BU of 6krn by Molmil](/molmil-images/mine/6krn) | Crystal structure of GH30 xylanase B from Talaromyces cellulolyticus expressed by Pichia pastoris in complex with aldotriuronic acid | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 4-O-methyl-alpha-D-glucopyranuronic acid-(1-2)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose, Mating factor alpha,GH30 Xylanase B, ... | Authors: | Nakamichi, Y, Watanabe, M, Inoue, H. | Deposit date: | 2019-08-22 | Release date: | 2020-06-17 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (1.653 Å) | Cite: | Substrate recognition by a bifunctional GH30-7 xylanase B from Talaromyces cellulolyticus. Febs Open Bio, 10, 2020
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6KRL
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![BU of 6krl by Molmil](/molmil-images/mine/6krl) | Crystal structure of GH30 xylanase B from Talaromyces cellulolyticus expressed by Pichia pastoris | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ... | Authors: | Nakamichi, Y, Watanabe, M, Inoue, H. | Deposit date: | 2019-08-22 | Release date: | 2020-06-17 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (1.601 Å) | Cite: | Substrate recognition by a bifunctional GH30-7 xylanase B from Talaromyces cellulolyticus. Febs Open Bio, 10, 2020
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6M5Z
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![BU of 6m5z by Molmil](/molmil-images/mine/6m5z) | Catalytic domain of GH30 xylanase C from Talaromyces cellulolyticus | Descriptor: | ACETATE ION, GH30 Xylanase C, GLYCEROL, ... | Authors: | Nakamichi, Y, Watanabe, M, Inoue, H. | Deposit date: | 2020-03-12 | Release date: | 2021-01-20 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (1.65 Å) | Cite: | Crystal structure of GH30-7 endoxylanase C from the filamentous fungus Talaromyces cellulolyticus. Acta Crystallogr.,Sect.F, 76, 2020
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7X8V
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![BU of 7x8v by Molmil](/molmil-images/mine/7x8v) | Cooperative regulation of PBI1 and MAPKs controls WRKY45 transcription factor in rice immunity | Descriptor: | Os01g0156300 protein | Authors: | Ichimaru, K, Harada, K, Yamaguchi, K, Shigeta, S, Shimada, K, Ishikawa, K, Inoue, K, Nishio, Y, Yoshimura, S, Inoue, H, Yamashita, E, Fujiwara, T, Nakagawa, A, Kojima, C, Kawasaki, T. | Deposit date: | 2022-03-15 | Release date: | 2022-04-06 | Last modified: | 2024-05-29 | Method: | X-RAY DIFFRACTION (1.84 Å) | Cite: | Cooperative regulation of PBI1 and MAPKs controls WRKY45 transcription factor in rice immunity. Nat Commun, 13, 2022
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2YQY
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![BU of 2yqy by Molmil](/molmil-images/mine/2yqy) | Crystal structure of TT2238, a four-helix bundle protein | Descriptor: | Hypothetical protein TTHA0303 | Authors: | Nagata, K, Ohtsuka, J, Iino, H, Ebihara, A, Yokoyama, S, Kuramitsu, S, Tanokura, M. | Deposit date: | 2007-03-31 | Release date: | 2008-03-04 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Crystal structure of TTHA0303 (TT2238), a four-helix bundle protein with an exposed histidine triad from Thermus thermophilus HB8 at 2.0 A Proteins, 70, 2008
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6JXF
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![BU of 6jxf by Molmil](/molmil-images/mine/6jxf) | Photoswitchable fluorescent protein Gamillus, off-state (pH7.0) | Descriptor: | CHLORIDE ION, GLYCEROL, Green fluorescent protein, ... | Authors: | Nakashima, R, Sakurai, K, shinoda, H, Matsuda, T, Nagai, T. | Deposit date: | 2019-04-23 | Release date: | 2019-11-06 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Acid-Tolerant Reversibly Switchable Green Fluorescent Protein for Super-resolution Imaging under Acidic Conditions. Cell Chem Biol, 26, 2019
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3WP3
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![BU of 3wp3 by Molmil](/molmil-images/mine/3wp3) | |
5OWP
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![BU of 5owp by Molmil](/molmil-images/mine/5owp) | Crystal structure of glycopeptide "GVTSAfPDT*RPAP" in complex with scFv-SM3 | Descriptor: | 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-alpha-D-galactopyranose, 5,6-DIHYDRO-BENZO[H]CINNOLIN-3-YLAMINE, ... | Authors: | Bermejo, I.A, Albuquerque, I.S, Somovilla, V.J, Martinez-Saez, N, Castro-Lopez, J, Garcia-Martin, F, Hinou, H, Nishimura, S, Jimenez-Barbero, J, Asensio, J.L, Avenoza, A, Busto, J.H, Hurtado-Guerrero, R, Peregrina, J.M, Bernardes, G.J, Corzana, F. | Deposit date: | 2017-09-02 | Release date: | 2017-12-13 | Last modified: | 2024-01-17 | Method: | X-RAY DIFFRACTION (1.85 Å) | Cite: | The Use of Fluoroproline in MUC1 Antigen Enables Efficient Detection of Antibodies in Patients with Prostate Cancer. J. Am. Chem. Soc., 139, 2017
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1V6Y
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![BU of 1v6y by Molmil](/molmil-images/mine/1v6y) | Crystal Structure Of chimeric Xylanase between Streptomyces Olivaceoviridis E-86 FXYN and Cellulomonas fimi Cex | Descriptor: | Beta-xylanase,Exoglucanase/xylanase | Authors: | Kaneko, S, Ichinose, H, Fujimoto, Z, Kuno, A, Yura, K, Go, M, Mizuno, H, Kusakabe, I, Kobayashi, H. | Deposit date: | 2003-12-04 | Release date: | 2004-09-07 | Last modified: | 2024-04-10 | Method: | X-RAY DIFFRACTION (2.2 Å) | Cite: | Structure and function of a family 10 beta-xylanase chimera of Streptomyces olivaceoviridis E-86 FXYN and Cellulomonas fimi Cex J.Biol.Chem., 279, 2004
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3WFL
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![BU of 3wfl by Molmil](/molmil-images/mine/3wfl) | Crtstal structure of glycoside hydrolase family 5 beta-mannanase from Talaromyces trachyspermus | Descriptor: | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ... | Authors: | Suzuki, K, Ichinose, H, Kamino, K, Ogasawara, W, Kaneko, S, Fushinobu, S. | Deposit date: | 2013-07-19 | Release date: | 2014-07-23 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.6 Å) | Cite: | Purification, cloning, functional expression, structure, and characterization of a thermostable beta-mannanase from Talaromyces trachyspermus and its efficiency in production of mannooligosaccharides from coffee wastes To be Published
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3IYZ
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![BU of 3iyz by Molmil](/molmil-images/mine/3iyz) | Structure of Aquaporin-4 S180D mutant at 10.0 A resolution from electron micrograph | Descriptor: | Aquaporin-4 | Authors: | Mitsuma, T, Tani, K, Hiroaki, Y, Kamegawa, A, Suzuki, H, Hibino, H, Kurachi, Y, Fujiyoshi, Y. | Deposit date: | 2010-07-24 | Release date: | 2010-08-25 | Last modified: | 2023-09-06 | Method: | ELECTRON CRYSTALLOGRAPHY (10 Å) | Cite: | Influence of the cytoplasmic domains of aquaporin-4 on water conduction and array formation. J.Mol.Biol., 402, 2010
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3A6R
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![BU of 3a6r by Molmil](/molmil-images/mine/3a6r) | E13Q mutant of FMN-binding protein from Desulfovibrio vulgaris (Miyazaki F) | Descriptor: | CHLORIDE ION, FLAVIN MONONUCLEOTIDE, FMN-binding protein | Authors: | Nakanishi, T, Haruyama, Y, Inoue, H, Kitamura, M. | Deposit date: | 2009-09-08 | Release date: | 2010-09-01 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.2 Å) | Cite: | Effects of the disappearance of one charge on ultrafast fluorescence dynamics of the FMN binding protein. J.Phys.Chem.B, 114, 2010
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3A6Q
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![BU of 3a6q by Molmil](/molmil-images/mine/3a6q) | E13T mutant of FMN-binding protein from Desulfovibrio vulgaris (Miyazaki F) | Descriptor: | CHLORIDE ION, FLAVIN MONONUCLEOTIDE, FMN-binding protein | Authors: | Nakanishi, T, Haruyama, Y, Inoue, H, Kitamura, M. | Deposit date: | 2009-09-08 | Release date: | 2010-09-01 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.4 Å) | Cite: | Effects of the disappearance of one charge on ultrafast fluorescence dynamics of the FMN binding protein. J.Phys.Chem.B, 114, 2010
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3A21
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![BU of 3a21 by Molmil](/molmil-images/mine/3a21) | Crystal Structure of Streptomyces avermitilis beta-L-Arabinopyranosidase | Descriptor: | 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, GLYCEROL, ... | Authors: | Fujimoto, Z, Ichinose, H, Kaneko, S. | Deposit date: | 2009-04-27 | Release date: | 2009-07-14 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.51 Å) | Cite: | A beta-l-Arabinopyranosidase from Streptomyces avermitilis is a novel member of glycoside hydrolase family 27. J.Biol.Chem., 284, 2009
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1WOE
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![BU of 1woe by Molmil](/molmil-images/mine/1woe) | X-ray structure of a Z-DNA hexamer d(CGCGCG) | Descriptor: | SPERMINE, Z-DNA hexamer | Authors: | Chatake, T, Tanaka, I, Umino, H, Arai, S, Niimura, N. | Deposit date: | 2004-08-15 | Release date: | 2005-07-26 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (1.5 Å) | Cite: | The hydration structure of a Z-DNA hexameric duplex determined by a neutron diffraction technique. Acta Crystallogr.,Sect.D, 61, 2005
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3AKH
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![BU of 3akh by Molmil](/molmil-images/mine/3akh) | Crystal structure of exo-1,5-alpha-L-arabinofuranosidase complexed with alpha-1,5-L-arabinofuranotriose | Descriptor: | CHLORIDE ION, GLYCEROL, Putative secreted alpha L-arabinofuranosidase II, ... | Authors: | Fujimoto, Z, Ichinose, H, Kaneko, S. | Deposit date: | 2010-07-14 | Release date: | 2010-08-25 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | Crystal Structure of an Exo-1,5-{alpha}-L-arabinofuranosidase from Streptomyces avermitilis Provides Insights into the Mechanism of Substrate Discrimination between Exo- and Endo-type Enzymes in Glycoside Hydrolase Family 43. J.Biol.Chem., 285, 2010
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