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PDB: 364 results

1NKL
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NK-LYSIN FROM PIG, NMR, 20 STRUCTURES
Descriptor: NK-LYSIN
Authors:Otting, G, Liepinsh, E.
Deposit date:1997-04-17
Release date:1997-06-16
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Saposin fold revealed by the NMR structure of NK-lysin.
Nat.Struct.Biol., 4, 1997
2KNI
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High-resolution solution structure of the ASIC1a blocker PcTX1
Descriptor: Psalmotoxin-1
Authors:King, G.F, Mobli, M, Saez, N.J.
Deposit date:2009-08-25
Release date:2010-09-01
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:A dynamic pharmacophore drives the interaction between Psalmotoxin-1 and the putative drug target acid-sensing ion channel 1a.
Mol.Pharmacol., 80, 2011
2M6J
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BU of 2m6j by Molmil
Structure of a vertebrate toxin from the badge huntsman spider
Descriptor: Toxin AbTx
Authors:King, G.F, Mobli, M, Brust, A, Fry, B.G.
Deposit date:2013-04-04
Release date:2014-04-09
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structure of a novel vertebrate toxin from the badge huntsman spider
To be Published
2M36
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BU of 2m36 by Molmil
Solution structure of the insecticidal spider-venom peptide Aps III
Descriptor: U2-cyrtautoxin-As1a
Authors:King, G.F, Bende, N.S, Mobli, M.
Deposit date:2013-01-10
Release date:2013-03-27
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:The insecticidal neurotoxin Aps III is an atypical knottin peptide that potently blocks insect voltage-gated sodium channels.
Biochem Pharmacol, 85, 2013
4QLP
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BU of 4qlp by Molmil
Atomic structure of tuberculosis necrotizing toxin (TNT) complexed with its immunity factor IFT
Descriptor: Alanine and proline rich protein, tuberculosis necrotizing toxin (TNT), immunity factor IFT
Authors:Cingolani, G, Lokareddy, R.K, Sun, J, Siroy, A, Speer, A, Doornbos, K.S, Niederweis, M.
Deposit date:2014-06-12
Release date:2015-07-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:The tuberculosis necrotizing toxin kills macrophages by hydrolyzing NAD.
Nat.Struct.Mol.Biol., 22, 2015
2M35
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BU of 2m35 by Molmil
NMR study of k-Ssm1a
Descriptor: k-Ssm1a
Authors:King, G.F, Undheim, E.A, Mobli, M, Yang, S, Rong, M, Lai, R.
Deposit date:2013-01-09
Release date:2014-01-15
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:NMR study of k-Ssm1a
To be Published
9C20
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The Sialidase NanJ in complex with Neu5,9Ac
Descriptor: 1,2-ETHANEDIOL, 9-O-acetyl-5-acetamido-3,5-dideoxy-D-glycero-alpha-D-galacto-non-2-ulopyranosonic acid, exo-alpha-sialidase
Authors:Medley, B.J, Low, K.E, Garber, J.M, Gray, T.E, Leeann, L.L, Fordwour, O.B, Inglis, G.D, Boons, G.J, Zandberg, W.F, Abbott, W, Boraston, A.
Deposit date:2024-05-30
Release date:2024-09-04
Method:X-RAY DIFFRACTION (2.699 Å)
Cite:NanJ sialidase in complex with Neu5,9Ac
To Be Published
1VTX
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DELTA-ATRACOTOXIN-HV1 (VERSUTOXIN) FROM HADRONYCHE VERSUTA, NMR, 20 STRUCTURES
Descriptor: DELTA-ATRACOTOXIN-HV1
Authors:Fletcher, J.I, Chapman, B.E, King, G.F.
Deposit date:1997-03-13
Release date:1998-01-28
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:The structure of versutoxin (delta-atracotoxin-Hv1) provides insights into the binding of site 3 neurotoxins to the voltage-gated sodium channel.
Structure, 5, 1997
8U5O
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BU of 8u5o by Molmil
The structure of the catalytic domain of NanI sialdase in complex with Neu5Gc
Descriptor: CALCIUM ION, Exo-alpha-sialidase, N-glycolyl-alpha-neuraminic acid, ...
Authors:Medley, B.J, Low, K.E, Garber, J.M, Gray, T.E, Liu, L, Klassen, L, Fordwour, O.B, Inglis, G.D, Boons, G.J, Zandberg, W.F, Abbott, W.D, Boraston, A.B.
Deposit date:2023-09-12
Release date:2024-09-04
Last modified:2024-09-25
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:A "terminal" case of glycan catabolism: structural and enzymatic characterization of the sialidases of Clostridium perfringens.
J.Biol.Chem., 2024
9IY2
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BU of 9iy2 by Molmil
Immune complex of HEV-E2s, nAb 8C11 and nAb 8H3
Descriptor: Heavy Chain of mAb 8C11, Heavy Chain of mAb 8H3, Light Chain of mAb 8C11, ...
Authors:Minghua, Z, Lizhi, Z, Ying, G, Shaowei, L.
Deposit date:2024-07-29
Release date:2024-08-28
Last modified:2024-09-04
Method:X-RAY DIFFRACTION (3.476 Å)
Cite:Structural basis for the synergetic neutralization of hepatitis E virus by antibody-antibody interaction
To Be Published
9BGM
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BU of 9bgm by Molmil
Pseudomonas phage DEV neck and tail (portal, head-to-tail and tail tube proteins)
Descriptor: gp75 tail tube, gp80 portal protein, gp83 head-to-tail
Authors:Iglesias, S.M, Hou, C.-F.D, Li, F, Cingolani, G.
Deposit date:2024-04-19
Release date:2024-09-04
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Integrative structural analysis of Pseudomonas phage DEV reveals a genome ejection motor
To Be Published
9IY0
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BU of 9iy0 by Molmil
anti-HEV mAb 8H3
Descriptor: Heavy chain of 8H3 Fab, Light chain of 8H3 Fab, MAGNESIUM ION
Authors:Minghua, Z, Lizhi, Z, Yang, H, Ying, G, Shaowei, L.
Deposit date:2024-07-29
Release date:2024-09-04
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Structural basis for the synergetic neutralization of hepatitis E virus by antibody-antibody interaction
To Be Published
9BGN
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BU of 9bgn by Molmil
Pseudomonas phage DEV 5-fold vertex (major coat protein)
Descriptor: gp77 major coat protein
Authors:Iglesias, S.M, Hou, C.F.D, Li, F, Cingolani, G.
Deposit date:2024-04-19
Release date:2024-09-04
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Integrative structural analysis of Pseudomonas phage DEV reveals a genome ejection motor
To Be Published
9BGO
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BU of 9bgo by Molmil
Pseudomonas phage DEV gp72 ejection protein (pre-ejection conformation)
Descriptor: gp72
Authors:Iglesias, S.M, Hou, C.F.D, Li, F, Cingolani, G.
Deposit date:2024-04-19
Release date:2024-09-04
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Integrative structural analysis of Pseudomonas phage DEV reveals a genome ejection motor.
To Be Published
1MI4
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BU of 1mi4 by Molmil
Glyphosate insensitive G96A mutant EPSP synthase liganded with shikimate-3-phosphate
Descriptor: 5-enolpyruvylshikimate-3-phosphate synthase, FORMIC ACID, SHIKIMATE-3-PHOSPHATE
Authors:Eschenburg, S, Healy, M.L, Priestman, M.A, Lushington, G.H, Schonbrunn, E.
Deposit date:2002-08-21
Release date:2002-12-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:How the mutation glycine96 to alanine confers glyphosate insensitivity to 5-enolpyruvyl shikimate-3-phosphate synthase from Escherichia coli.
PLANTA, 216, 2002
3L25
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BU of 3l25 by Molmil
Crystal structure of Zaire Ebola VP35 interferon inhibitory domain bound to 8 bp dsRNA
Descriptor: CHLORIDE ION, FORMIC ACID, GLYCEROL, ...
Authors:Leung, D.W, Prins, K.C, Borek, D.M, Farahbakhsh, M, Tufariello, J.M, Ramanan, P, Nix, J.C, Helgeson, L.A, Otwinowski, Z, Honzatko, R.B, Basler, C.F, Amarasinghe, G.K.
Deposit date:2009-12-14
Release date:2010-01-26
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for dsRNA recognition and interferon antagonism by Ebola VP35.
Nat.Struct.Mol.Biol., 17, 2010
3L26
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BU of 3l26 by Molmil
Crystal structure of Zaire Ebola VP35 interferon inhibitory domain bound to 8 bp dsRNA
Descriptor: CHLORIDE ION, MAGNESIUM ION, Polymerase cofactor VP35, ...
Authors:Leung, D.W, Prins, K.C, Borek, D.M, Farahbakhsh, M, Tufariello, J.M, Ramanan, P, Nix, J.C, Helgeson, L.A, Otwinowski, Z, Honzatko, R.B, Basler, C.F, Amarasinghe, G.K.
Deposit date:2009-12-14
Release date:2010-01-26
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis for dsRNA recognition and interferon antagonism by Ebola VP35.
Nat.Struct.Mol.Biol., 17, 2010
3L28
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BU of 3l28 by Molmil
Crystal structure of Zaire Ebola VP35 interferon inhibitory domain K339A mutant
Descriptor: CHLORIDE ION, Polymerase cofactor VP35, SODIUM ION, ...
Authors:Leung, D.W, Prins, K.C, Borek, D.M, Farahbakhsh, M, Tufariello, J.M, Ramanan, P, Nix, J.C, Helgeson, L.A, Otwinowski, Z, Honzatko, R.B, Basler, C.F, Amarasinghe, G.K.
Deposit date:2009-12-14
Release date:2010-01-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis for dsRNA recognition and interferon antagonism by Ebola VP35.
Nat.Struct.Mol.Biol., 17, 2010
3L27
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BU of 3l27 by Molmil
Crystal structure of Zaire Ebola VP35 interferon inhibitory domain R312A mutant
Descriptor: CHLORIDE ION, GLYCEROL, PHOSPHATE ION, ...
Authors:Leung, D.W, Prins, K.C, Borek, D.M, Farahbakhsh, M, Tufariello, J.M, Ramanan, P, Nix, J.C, Helgeson, L.A, Otwinowski, Z, Honzatko, R.B, Basler, C.F, Amarasinghe, G.K.
Deposit date:2009-12-14
Release date:2010-01-26
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural basis for dsRNA recognition and interferon antagonism by Ebola VP35.
Nat.Struct.Mol.Biol., 17, 2010
3L29
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BU of 3l29 by Molmil
Crystal Structure of Zaire Ebola VP35 interferon inhibitory domain K319A/R322A mutant
Descriptor: CHLORIDE ION, Polymerase cofactor VP35
Authors:Leung, D.W, Ramanan, P, Borek, D.M, Amarasinghe, G.K.
Deposit date:2009-12-14
Release date:2010-02-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Mutations abrogating VP35 interaction with double-stranded RNA render ebola virus avirulent in guinea pigs.
J.Virol., 84, 2010
3L2A
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BU of 3l2a by Molmil
Crystal structure of Reston Ebola VP35 interferon inhibitory domain
Descriptor: ACETIC ACID, GLYCEROL, Polymerase cofactor VP35
Authors:Leung, D.W, Farahbakhsh, M, Borek, D.M, Prins, K.C, Basler, C.F, Amarasinghe, G.K.
Deposit date:2009-12-14
Release date:2010-05-12
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Structural and Functional Characterization of Reston Ebola Virus VP35 Interferon Inhibitory Domain.
J.Mol.Biol., 399, 2010
6DKU
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BU of 6dku by Molmil
Crystal structure of Myotis VP35 mutant of interferon inhibitory domain
Descriptor: VP35
Authors:Liu, H, Ginell, G.M, Keefe, L.J, Leung, D.W, Amarasinghe, G.K.
Deposit date:2018-05-30
Release date:2018-07-18
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Conservation of Structure and Immune Antagonist Functions of Filoviral VP35 Homologs Present in Microbat Genomes.
Cell Rep, 24, 2018
6DWJ
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BU of 6dwj by Molmil
SAMHD1 Bound to Vidarabine-TP in the Catalytic Pocket
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, 9-{5-O-[(S)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]oxy}phosphoryl]-beta-D-arabinofuranosyl}-9H-purin-6-amine, Deoxynucleoside triphosphate triphosphohydrolase SAMHD1, ...
Authors:Knecht, K.M, Buzovetsky, O, Schneider, C, Thomas, D, Srikanth, V, Kaderali, L, Tofoleanu, F, Reiss, K, Ferreiros, N, Geisslinger, G, Batista, V.S, Ji, X, Cinatl, J, Keppler, O.T, Xiong, Y.
Deposit date:2018-06-26
Release date:2018-10-24
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The structural basis for cancer drug interactions with the catalytic and allosteric sites of SAMHD1.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6DWD
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BU of 6dwd by Molmil
SAMHD1 Bound to Clofarabine-TP in the Catalytic Pocket and Allosteric Pocket
Descriptor: 3,3',3''-phosphanetriyltripropanoic acid, 9-{2-deoxy-2-fluoro-5-O-[(R)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}phosphoryl]-beta-D-arabinofuranosyl}-2-me thyl-9H-purin-6-amine, Deoxynucleoside triphosphate triphosphohydrolase SAMHD1, ...
Authors:Knecht, K.M, Buzovetsky, O, Schneider, C, Thomas, D, Srikanth, V, Kaderali, L, Tofoleanu, F, Reiss, K, Ferreiros, N, Geisslinger, G, Batista, V.S, Ji, X, Cinatl, J, Keppler, O.T, Xiong, Y.
Deposit date:2018-06-26
Release date:2018-10-10
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The structural basis for cancer drug interactions with the catalytic and allosteric sites of SAMHD1.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6DW4
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SAMHD1 Bound to Cladribine-TP in the Catalytic Pocket and Allosteric Pocket
Descriptor: 2'-deoxy-2-methyladenosine 5'-(tetrahydrogen triphosphate), Deoxynucleoside triphosphate triphosphohydrolase SAMHD1, GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Knecht, K.M, Buzovetsky, O, Schneider, C, Thomas, D, Srikanth, V, Kaderali, L, Tofoleanu, F, Reiss, K, Ferreiros, N, Geisslinger, G, Batista, V.S, Ji, X, Cinatl, J, Keppler, O.T, Xiong, Y.
Deposit date:2018-06-26
Release date:2018-10-10
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:The structural basis for cancer drug interactions with the catalytic and allosteric sites of SAMHD1.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018

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