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PDB: 174 件

4C1B
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Esterase domain of the ZfL2-1 ORF1 protein from the zebrafish ZfL2-1 retrotransposon
分子名称: ORF1-ENCODED PROTEIN
著者Schneider, A.M, Weichenrieder, O.
登録日2013-08-11
公開日2013-09-11
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.501 Å)
主引用文献Structure and Properties of the Esterase from Non-Ltr Retrotransposons Suggest a Role for Lipids in Retrotransposition.
Nucleic Acids Res., 41, 2013
4C1A
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Coiled coil domain of the ZfL2-1 ORF1 protein from the zebrafish ZfL2- 1 retrotransposon
分子名称: GLYCEROL, ORF1-ENCODED PROTEIN
著者Schneider, A.M, Weichenrieder, O.
登録日2013-08-11
公開日2013-09-11
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Structure and Properties of the Esterase from Non-Ltr Retrotransposons Suggest a Role for Lipids in Retrotransposition.
Nucleic Acids Res., 41, 2013
5O98
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Binary complex of Catharanthus roseus Vitrosamine Synthase with NADP+
分子名称: Alcohol dehydrogenase 1, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Stavrinides, A.K, Tatsis, E.C, Dang, T.T, Caputi, L, Stevenson, C.E.M, Lawson, D.M, Schneider, B, O'Connor, S.E.
登録日2017-06-16
公開日2018-02-21
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Discovery of a Short-Chain Dehydrogenase from Catharanthus roseus that Produces a New Monoterpene Indole Alkaloid.
Chembiochem, 19, 2018
8A1C
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BU of 8a1c by Molmil
TraI trans-esterase domain from pKM101 (DNA bound)
分子名称: 11mer oriT DNA, MANGANESE (II) ION, TraI
著者Breidenstein, A, Berntsson, R.P.-A.
登録日2022-06-01
公開日2022-07-13
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural and functional characterization of TraI from pKM101 reveals basis for DNA processing.
Life Sci Alliance, 6, 2023
3W30
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BU of 3w30 by Molmil
Structual basis for the recognition of Ubc13 by the Shigella flexneri effector OspI
分子名称: ORF169b
著者Nishide, A, Kim, M, Takagi, K, Sasakawa, C, Mizushima, T.
登録日2012-12-07
公開日2013-03-27
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.99 Å)
主引用文献Structural Basis for the Recognition of Ubc13 by the Shigella flexneri Effector OspI.
J.Mol.Biol., 425, 2013
5WOP
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High Resolution Structure of Mutant CA09-PB2cap
分子名称: GLYCEROL, Polymerase PB2
著者Constantinides, A.E, Gumpper, R.H, Severin, C, Luo, M.
登録日2017-08-02
公開日2017-12-20
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献High-resolution structure of the Influenza A virus PB2cap binding domain illuminates the changes induced by ligand binding.
Acta Crystallogr F Struct Biol Commun, 74, 2018
3G9H
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BU of 3g9h by Molmil
Crystal structure of the C-terminal mu homology domain of Syp1
分子名称: 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL, Suppressor of yeast profilin deletion
著者Reider, A, Barker, S, Mishra, S, Im, Y.J, Maldonado-Baez, L, Hurley, J, Traub, L, Wendland, B.
登録日2009-02-13
公開日2009-09-22
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Syp1 is a conserved endocytic adaptor that contains domains involved in cargo selection and membrane tubulation.
Embo J., 28, 2009
5KH1
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Shigella flexneri Effector IpaH1880
分子名称: Invasion plasmid antigen
著者Nishide, A, Mizushima, T.
登録日2016-06-14
公開日2017-07-12
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Shigella flexneri Effector IpaH1880
To Be Published
3G9G
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Crystal Structure of the N-terminal EFC/F-BAR domain of Syp1
分子名称: Suppressor of yeast profilin deletion
著者Reider, A, Barker, S, Mishra, S, Im, Y.J, Maldonado-Baez, L, Hurley, J, Traub, L, Wendland, B.
登録日2009-02-13
公開日2009-09-22
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Syp1 is a conserved endocytic adaptor that contains domains involved in cargo selection and membrane tubulation.
Embo J., 28, 2009
8A1B
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BU of 8a1b by Molmil
TraI trans-esterase domain from pKM101 (apo)
分子名称: CHLORIDE ION, GLYCEROL, MANGANESE (II) ION, ...
著者Breidenstein, A, Berntsson, R.P.-A.
登録日2022-06-01
公開日2022-07-13
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural and functional characterization of TraI from pKM101 reveals basis for DNA processing.
Life Sci Alliance, 6, 2023
3W31
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Structual basis for the recognition of Ubc13 by the Shigella flexneri effector OspI
分子名称: IODIDE ION, ORF169b, Ubiquitin-conjugating enzyme E2 N
著者Nishide, A, Kim, M, Takagi, K, Sasakawa, C, Mizushima, T.
登録日2012-12-07
公開日2013-03-27
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.96 Å)
主引用文献Structural basis for the recognition of Ubc13 by the Shigella flexneri effector OspI.
J.Mol.Biol., 425, 2013
4XZX
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BU of 4xzx by Molmil
Shigella flexneri effector OspI C62S mutant
分子名称: ACETATE ION, ORF169b
著者Nishide, A, Takagi, K, Minsoo, K, Sasakawa, C, Mizushima, T.
登録日2015-02-05
公開日2016-02-10
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献New insights into the active site structure of Shigella effecter OspI
To Be Published
5FI5
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HETEROYOHIMBINE SYNTHASE THAS1 FROM CATHARANTHUS ROSEUS - APO FORM
分子名称: PHOSPHATE ION, Tetrahydroalstonine synthase, ZINC ION
著者Stavrinides, A, Tatsis, E.C, Caputi, L, Foureau, E, Stevenson, C.E.M, Lawson, D.M, Courdavault, V, O'Connor, S.E.
登録日2015-12-22
公開日2016-07-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structural investigation of heteroyohimbine alkaloid synthesis reveals active site elements that control stereoselectivity.
Nat Commun, 7, 2016
5A5B
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Structure of the 26S proteasome-Ubp6 complex
分子名称: 26S PROTEASE REGULATORY SUBUNIT 4 HOMOLOG, 26S PROTEASE REGULATORY SUBUNIT 6A, 26S PROTEASE REGULATORY SUBUNIT 6B HOMOLOG, ...
著者Aufderheide, A, Beck, F, Stengel, F, Hartwig, M, Schweitzer, A, Pfeifer, G, Goldberg, A.L, Sakata, E, Baumeister, W, Foerster, F.
登録日2015-06-17
公開日2015-07-22
最終更新日2017-08-30
実験手法ELECTRON MICROSCOPY (9.5 Å)
主引用文献Structural Characterization of the Interaction of Ubp6 with the 26S Proteasome.
Proc.Natl.Acad.Sci.USA, 112, 2015
3ZS0
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BU of 3zs0 by Molmil
Human Myeloperoxidase inactivated by TX2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 3-(4-FLUOROBENZYL)-2-THIOXO-1,2,3,7-TETRAHYDRO-6H-PURIN-6-ONE, ACETATE ION, ...
著者Tiden, A.K, Sjogren, T, Svensson, M, Bernlind, A, Senthilmohan, R, Auchere, F, Norman, H, Markgren, P.O, Gustavsson, S, Schmidt, S, Lundquist, S, Forbes, L.V, Magon, N.J, Jameson, G.N, Eriksson, H, Kettle, A.J.
登録日2011-06-21
公開日2011-08-31
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献2-Thioxanthines are Mechanism-Based Inactivators of Myeloperoxidase that Block Oxidative Stress During Inflammation.
J.Biol.Chem., 286, 2011
3ZS1
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Human Myeloperoxidase inactivated by TX5
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 3-(2-METHOXYETHYL)-2-THIOXO-1,2,3,7-TETRAHYDRO-6H-PURIN-6-ONE, ACETATE ION, ...
著者Tiden, A.K, Sjogren, T, Svensson, M, Bernlind, A, Senthilmohan, R, Auchere, F, Norman, H, Markgren, P.O, Gustavsson, S, Schmidt, S, Lundquist, S, Forbes, L.V, Magon, N.J, Jameson, G.N, Eriksson, H, Kettle, A.J.
登録日2011-06-21
公開日2011-08-31
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献2-Thioxanthines are Mechanism-Based Inactivators of Myeloperoxidase that Block Oxidative Stress During Inflammation.
J.Biol.Chem., 286, 2011
5H82
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HETEROYOHIMBINE SYNTHASE THAS2 FROM CATHARANTHUS ROSEUS - APO FORM
分子名称: ZINC ION, heteroyohimbine synthase THAS2
著者Stavrinides, A, Tatsis, E.C, Caputi, L, Foureau, E, Stevenson, C.E.M, Lawson, D.M, Courdavault, V, O'Connor, S.E.
登録日2015-12-23
公開日2016-07-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structural investigation of heteroyohimbine alkaloid synthesis reveals active site elements that control stereoselectivity.
Nat Commun, 7, 2016
5FI3
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HETEROYOHIMBINE SYNTHASE THAS1 FROM CATHARANTHUS ROSEUS - COMPLEX WITH NADP+
分子名称: 1,2-ETHANEDIOL, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Tetrahydroalstonine synthase, ...
著者Stavrinides, A, Tatsis, E.C, Caputi, L, Foureau, E, Stevenson, C.E.M, Lawson, D.M, Courdavault, V, O'Connor, S.E.
登録日2015-12-22
公開日2016-07-27
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献Structural investigation of heteroyohimbine alkaloid synthesis reveals active site elements that control stereoselectivity.
Nat Commun, 7, 2016
5H83
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HETEROYOHIMBINE SYNTHASE HYS FROM CATHARANTHUS ROSEUS - APO FORM
分子名称: ZINC ION, heteroyohimbine synthase HYS
著者Stavrinides, A, Tatsis, E.C, Caputi, L, Foureau, E, Stevenson, C.E.M, Lawson, D.M, Courdavault, V, O'Connor, S.E.
登録日2015-12-23
公開日2016-07-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structural investigation of heteroyohimbine alkaloid synthesis reveals active site elements that control stereoselectivity.
Nat Commun, 7, 2016
5H81
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HETEROYOHIMBINE SYNTHASE THAS2 FROM CATHARANTHUS ROSEUS - COMPLEX WITH NADP+
分子名称: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ZINC ION, heteroyohimbine synthase THAS2
著者Stavrinides, A, Tatsis, E.C, Caputi, L, Foureau, E, Stevenson, C.E.M, Lawson, D.M, Courdavault, V, O'Connor, S.E.
登録日2015-12-23
公開日2016-07-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural investigation of heteroyohimbine alkaloid synthesis reveals active site elements that control stereoselectivity.
Nat Commun, 7, 2016
2C3Z
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Crystal structure of a truncated variant of indole-3-glycerol phosphate synthase from Sulfolobus solfataricus
分子名称: INDOLE-3-GLYCEROL PHOSPHATE SYNTHASE, SULFATE ION
著者Schneider, A, Knoechel, T, Darimont, B, Hennig, M, Dietrich, S, Kirschner, K, Sterner, R.
登録日2005-10-13
公開日2005-10-13
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Role of the N-Terminal Extension of the (Betaalpha)(8)-Barrel Enzyme Indole-3-Glycerol Phosphate Synthase for its Fold, Stability, and Catalytic Activity.
Biochemistry, 44, 2005
8QCB
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BU of 8qcb by Molmil
CryoEM structure of a S. Cerevisiae Ski2387 complex in the open state
分子名称: Antiviral helicase SKI2, Antiviral protein SKI8, Superkiller protein 3, ...
著者Keidel, A, Koegel, A, Reichelt, P, Kowalinski, E, Schaefer, I.B, Conti, E.
登録日2023-08-25
公開日2023-11-08
最終更新日2023-11-29
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Concerted structural rearrangements enable RNA channeling into the cytoplasmic Ski238-Ski7-exosome assembly.
Mol.Cell, 83, 2023
8QCA
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BU of 8qca by Molmil
CryoEM structure of a S. Cerevisiae Ski2387 complex in the closed state bound to RNA
分子名称: Antiviral helicase SKI2, Antiviral protein SKI8, RNA (5'-R(P*UP*UP*UP*U)-3'), ...
著者Keidel, A, Koegel, A, Reichelt, P, Kowalinski, E, Schaefer, I.B, Conti, E.
登録日2023-08-25
公開日2023-11-15
最終更新日2023-11-29
実験手法ELECTRON MICROSCOPY (2.84 Å)
主引用文献Concerted structural rearrangements enable RNA channeling into the cytoplasmic Ski238-Ski7-exosome assembly.
Mol.Cell, 83, 2023
8Q9T
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CryoEM structure of a S. Cerevisiae Ski238 complex bound to RNA
分子名称: Antiviral helicase SKI2, Antiviral protein SKI8, RNA (5'-R(P*UP*UP*UP*U)-3'), ...
著者Keidel, A, Koegel, A, Reichelt, P, Kowalinski, E, Schaefer, I.B, Conti, E.
登録日2023-08-21
公開日2023-11-29
実験手法ELECTRON MICROSCOPY (2.84 Å)
主引用文献Concerted structural rearrangements enable RNA channeling into the cytoplasmic Ski238-Ski7-exosome assembly.
Mol.Cell, 83, 2023
8QCF
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yeast cytoplasmic exosome-Ski2 complex degrading a RNA substrate
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Antiviral helicase SKI2, Exosome complex component CSL4, ...
著者Keidel, A, Koegel, A, Reichelt, P, Kowalinski, E, Schaefer, I.B, Conti, E.
登録日2023-08-25
公開日2024-01-10
実験手法ELECTRON MICROSCOPY (2.55 Å)
主引用文献Concerted structural rearrangements enable RNA channeling into the cytoplasmic Ski238-Ski7-exosome assembly.
Mol.Cell, 83, 2023

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