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PDB: 17801 results

6RZ2
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BU of 6rz2 by Molmil
SalL with Chloroadenosine
Descriptor: 5'-CHLORO-5'-DEOXYADENOSINE, Adenosyl-chloride synthase
Authors:McKean, I, Frese, A, Cuetos, A, Burley, G, Grogan, G.
Deposit date:2019-06-12
Release date:2020-04-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:S-Adenosyl Methionine Cofactor Modifications Enhance the Biocatalytic Repertoire of Small Molecule C-Alkylation.
Angew.Chem.Int.Ed.Engl., 58, 2019
6S0O
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BU of 6s0o by Molmil
Crystal Structure of Two-Domain Laccase from Streptomyces griseoflavus produced at 0.25 mM copper sulfate in growth medium
Descriptor: 1,2-ETHANEDIOL, COPPER (II) ION, GLYCEROL, ...
Authors:Gabdulkhakov, A.G, Tishchenko, T.V, Kolyadenko, I.A.
Deposit date:2019-06-17
Release date:2019-07-17
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Investigations of Accessibility of T2/T3 Copper Center of Two-Domain Laccase fromStreptomyces griseoflavusAc-993.
Int J Mol Sci, 20, 2019
6E5Z
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BU of 6e5z by Molmil
Crystal structure of human DJ-1 with a natural modification on Cys-106
Descriptor: CHLORIDE ION, Protein/nucleic acid deglycase DJ-1
Authors:Shumilin, I.A, Shumilina, S.V, Minor, W.
Deposit date:2018-07-23
Release date:2018-08-01
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:A transient post-translational modification of active site cysteine alters binding properties of the parkinsonism protein DJ-1.
Biochem. Biophys. Res. Commun., 504, 2018
5O2E
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BU of 5o2e by Molmil
Crystal structure of NDM-1 in complex with hydrolyzed cefuroxime - new refinement
Descriptor: (2R,5S)-5-[(carbamoyloxy)methyl]-2-[(R)-carboxy{[(2Z)-2-(furan-2-yl)-2-(methoxyimino)acetyl]amino}methyl]-5,6-dihydro-2H-1,3-thiazine-4-carboxylic acid, Metallo-beta-lactamase type 2, SULFATE ION, ...
Authors:Raczynska, J.E, Shabalin, I.G, Jaskolski, M, Minor, W, Wlodawer, A.
Deposit date:2017-05-20
Release date:2018-12-26
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:A close look onto structural models and primary ligands of metallo-beta-lactamases.
Drug Resist. Updat., 40, 2018
2OBY
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BU of 2oby by Molmil
Crystal structure of Human P53 inducible oxidoreductase (TP53I3,PIG3)
Descriptor: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Putative quinone oxidoreductase
Authors:Porte, S, Valencia, E, Farres, J, Fita, I, Pike, A.C.W, Shafqat, N, Debreczeni, J, Johansson, C, Haroniti, A, Gileadi, O, Arrowsmith, C.H, Edwards, A, Weigelt, J, Sundstrom, M, von Delft, F, Oppermann, U, Pares, X.
Deposit date:2006-12-20
Release date:2007-01-30
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of human P53 inducible oxidoreductase (TP53I3, PIG3)
To be Published
6JES
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BU of 6jes by Molmil
Apo crystal structure of class I type b peptide deformylase from Acinetobacter baumannii
Descriptor: GLYCEROL, Peptide deformylase, ZINC ION
Authors:Jung, K.H, Ho, T.H, Lee, I.H, Kang, L.W.
Deposit date:2019-02-07
Release date:2020-02-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Apo crystal structure of class I type b peptide deformylase from Acinetobacter baumannii
To be published
4CQK
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BU of 4cqk by Molmil
Crystal structure of ligand-bound NaD1
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, FLOWER-SPECIFIC DEFENSIN, SULFATE ION, ...
Authors:Lay, F.T, Mills, G.M, Poon, I.K.H, Baxter, A.A, Hulett, M.D, Kvansakul, M.
Deposit date:2014-02-17
Release date:2014-04-16
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Phosphoinositide-Mediated Oligomerization of a Defensin Induces Cell Lysis.
Elife, 3, 2014
6JF9
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BU of 6jf9 by Molmil
Apo crystal structure of class I type b peptide deformylase from Pseudomonas aeruginosa
Descriptor: GLYCEROL, NICKEL (II) ION, Peptide deformylase
Authors:Lee, I.H, Ho, T.H, Kang, L.W.
Deposit date:2019-02-08
Release date:2020-02-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Apo crystal structure of class I type b peptide deformylase from Pseudomonas aeruginosa
To be published
6S88
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BU of 6s88 by Molmil
Fumarate hydratase of Mycobacterium tuberculosis in complex with formate and allosteric modulator N-(2-Methoxy-5-((1,2,4,5-tetrahydro-3H-benzo[d]azepin-3-yl)sulfonyl)phenyl)-2-(4-oxo-3,4-dihydrophthalazin-1-yl)acetamide
Descriptor: FORMIC ACID, Fumarate hydratase class II, MAGNESIUM ION, ...
Authors:Whitehouse, A.J, Libardo, M.D, Kasbekar, M, Brear, P, Fischer, G, Thomas, C.J, Barry, C.E, Boshoff, H.I, Coyne, A.G, Abell, C.
Deposit date:2019-07-08
Release date:2019-09-25
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Targeting of Fumarate Hydratase fromMycobacterium tuberculosisUsing Allosteric Inhibitors with a Dimeric-Binding Mode.
J.Med.Chem., 62, 2019
6S42
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BU of 6s42 by Molmil
The double mutant(Ile44Leu+Gln102His) of haloalkane dehalogenase DbeA from Bradyrhizobium elkanii USDA94 with an eliminated halide-binding site
Descriptor: CHLORIDE ION, HEXANE-1,6-DIOL, Haloalkane dehalogenase, ...
Authors:Pudnikova, T, Mesters, J.R, Kuta Smatanova, I.
Deposit date:2019-06-26
Release date:2020-02-05
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystallization and Crystallographic Analysis of a Bradyrhizobium Elkanii USDA94 Haloalkane Dehalogenase Variant with an Eliminated Halide-Binding Site
Crystals, 2019
2OEC
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BU of 2oec by Molmil
Crystal structure of the uridine phosphorylase from Salmonella typhimurium in complex with 2,2'-anhydrouridine and potassium ion at 2.194A resolution
Descriptor: 2,2'-Anhydro-(1-beta-D-arabinofuranosyl)uracil, GLYCEROL, PENTAETHYLENE GLYCOL, ...
Authors:Timofeev, V.I, Lashkov, A.A, Pavlyuk, B.P, Mikhailov, A.M.
Deposit date:2006-12-29
Release date:2008-01-01
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.194 Å)
Cite:Crystal structure of the uridine phosphorylase from Salmonella typhimurium in complex with 2,2'-anhydrouridine and potassium ion at 2.194A resolution
To be Published
5OBX
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BU of 5obx by Molmil
Mycoplasma genitalium DnaK-NBD
Descriptor: Chaperone protein DnaK, GLYCEROL, SULFATE ION, ...
Authors:Adell, M, Calisto, B, Fita, I, Martinelli, L.
Deposit date:2017-06-29
Release date:2018-05-09
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:The nucleotide-bound/substrate-bound conformation of the Mycoplasma genitalium DnaK chaperone.
Protein Sci., 27, 2018
6S1S
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BU of 6s1s by Molmil
Crystal structure of AmpC from Pseudomonas aeruginosa in complex with [3-(2-carboxyvinyl)phenyl]boronic acid] inhibitor
Descriptor: (~{E})-3-[3-(dihydroxyboranyl)phenyl]prop-2-enoic acid, Beta-lactamase, PHOSPHATE ION
Authors:Kekez, I, Vicario, M, Bellio, P, Tosoni, E, Celenza, G, Blazquez, J, Tondi, D, Cendron, L.
Deposit date:2019-06-19
Release date:2019-10-09
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Phenylboronic Acids Probing Molecular Recognition against Class A and Class C beta-lactamases.
Antibiotics, 8, 2019
5O2F
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BU of 5o2f by Molmil
Crystal structure of NDM-1 in complex with hydrolyzed ampicillin - new refinement
Descriptor: (2R,4S)-2-[(R)-{[(2R)-2-amino-2-phenylacetyl]amino}(carboxy)methyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid, 1,2-ETHANEDIOL, CHLORIDE ION, ...
Authors:Raczynska, J.E, Shabalin, I.G, Jaskolski, M, Minor, W, Wlodawer, A.
Deposit date:2017-05-20
Release date:2018-12-26
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:A close look onto structural models and primary ligands of metallo-beta-lactamases.
Drug Resist. Updat., 40, 2018
6TLZ
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BU of 6tlz by Molmil
N-Domain P40/P90 Mycoplasma pneumoniae complexed with 3'SL
Descriptor: Mgp-operon protein 3, N-acetyl-alpha-neuraminic acid, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose, ...
Authors:Vizarraga, D, Aparicio, D, Illanes, R, Fita, I, Perez-Luque, R, Martin, J.
Deposit date:2019-12-03
Release date:2020-11-04
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Immunodominant proteins P1 and P40/P90 from human pathogen Mycoplasma pneumoniae.
Nat Commun, 11, 2020
5OH4
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BU of 5oh4 by Molmil
Cereblon isoform 4 from Magnetospirillum gryphiswaldense in complex with Piperidine-2,6-dione (Glutarimide)
Descriptor: Cereblon isoform 4, ZINC ION, piperidine-2,6-dione
Authors:Boichenko, I, Albrecht, R, Lupas, A.N, Hernandez Alvarez, B, Hartmann, M.D.
Deposit date:2017-07-14
Release date:2018-10-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Chemical Ligand Space of Cereblon.
Acs Omega, 3, 2018
1MJG
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BU of 1mjg by Molmil
CRYSTAL STRUCTURE OF BIFUNCTIONAL CARBON MONOXIDE DEHYDROGENASE/ACETYL-COA SYNTHASE(CODH/ACS) FROM MOORELLA THERMOACETICA (F. CLOSTRIDIUM THERMOACETICUM)
Descriptor: ACETATE ION, CARBON MONOXIDE DEHYDROGENASE BETA SUBUNIT, COPPER (I) ION, ...
Authors:Doukov, T.I, Iverson, T.M, Seravalli, J, Ragsdale, S.W, Drennan, C.L.
Deposit date:2002-08-27
Release date:2003-01-28
Last modified:2019-11-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A Ni-Fe-Cu center in a bifunctional carbon monoxide dehydrogenase/acetyl-CoA synthase
Science, 298, 2002
1KO3
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BU of 1ko3 by Molmil
VIM-2, a Zn-beta-lactamase from Pseudomonas aeruginosa with Cys221 reduced
Descriptor: ACETATE ION, CHLORIDE ION, HYDROXIDE ION, ...
Authors:Garcia-Saez, I, Docquier, J.-D, Rossolini, G.M, Dideberg, O.
Deposit date:2001-12-20
Release date:2003-09-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:The three-dimensional structure of VIM-2, a Zn-beta-lactamase from Pseudomonas aeruginosa in its reduced and oxidised form
J.Mol.Biol., 375, 2008
6JFC
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BU of 6jfc by Molmil
Actinonin bound crystal structure of class I type b peptide deformylase from Pseudomonas aeruginosa
Descriptor: ACTINONIN, NICKEL (II) ION, Peptide deformylase
Authors:Lee, I.H, Ho, T.H, Kang, L.W.
Deposit date:2019-02-08
Release date:2020-02-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Actinonin bound crystal structure of class I type b peptide deformylase from Pseudomonas aeruginosa
To be published
6JFN
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BU of 6jfn by Molmil
K4U bound crystal structure of class I type b peptide deformylase from Pseudomonas aeruginosa
Descriptor: L-[(N-HYDROXYAMINO)CARBONYL]PHENYLALANINE, NICKEL (II) ION, Peptide deformylase
Authors:Lee, I.H, Ho, T.H, Kang, L.W.
Deposit date:2019-02-11
Release date:2020-03-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:K4U bound crystal structure of class I type b peptide deformylase from Pseudomonas aeruginosa
To be published
1KL3
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BU of 1kl3 by Molmil
an engineered streptavidin with improved affinity for the strep-tag II peptide : SAm1-StrepII
Descriptor: strep-tag II peptide, streptavidin
Authors:Korndoerfer, I.P, Skerra, A.
Deposit date:2001-12-11
Release date:2002-04-03
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Improved affinity of engineered streptavidin for the Strep-tag II peptide is due to a fixed open conformation of the lid-like loop at the binding site.
Protein Sci., 11, 2002
6EZY
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BU of 6ezy by Molmil
ARABIDOPSIS THALIANA GSTF9, GSH AND GSOH BOUND
Descriptor: BROMIDE ION, GLUTATHIONE, GLYCEROL, ...
Authors:Tossounian, M.A, Wahni, K, VanMolle, I, Rosado, L, Vertommen, D, Messens, J.
Deposit date:2017-11-16
Release date:2018-08-15
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Redox-regulated methionine oxidation of Arabidopsis thaliana glutathione transferase Phi9 induces H-site flexibility.
Protein Sci., 28, 2019
6EZH
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BU of 6ezh by Molmil
Torpedo californica AChE in complex with indolic multi-target directed ligand
Descriptor: 1-(7-chloranyl-4-methoxy-1~{H}-indol-5-yl)-3-[1-(cyclohexylmethyl)piperidin-4-yl]propan-1-one, 2-acetamido-2-deoxy-beta-D-glucopyranose, Acetylcholinesterase
Authors:Santoni, G, Lalut, J, Karila, D, Lecoutey, C, Davis, A, Nachon, F, Sillman, I, Sussman, J, Weik, M, Maurice, T, Dallemagne, P, Rochais, C.
Deposit date:2017-11-15
Release date:2018-11-21
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Novel multitarget-directed ligands targeting acetylcholinesterase and sigma1receptors as lead compounds for treatment of Alzheimer's disease: Synthesis, evaluation, and structural characterization of their complexes with acetylcholinesterase.
Eur J Med Chem, 162, 2018
4EAD
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BU of 4ead by Molmil
Thymidine phosphorylase from E.coli with 3'-azido-2'-fluoro-dideoxyuridine
Descriptor: 2',3'-dideoxy-2'-fluoro-3'-triaza-1,2-dien-2-ium-1-yluridine, GLYCEROL, SULFATE ION, ...
Authors:Timofeev, V.I, Abramchik, Y.A, Esipov, R.S, Kuranova, I.P.
Deposit date:2012-03-22
Release date:2013-03-27
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Thymidine phosphorylase from E.coli with 3'-azido-2'-fluoro-dideoxyuridine
To be Published
3ANZ
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BU of 3anz by Molmil
Crystal Structure of alpha-hemolysin
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETIC ACID, Alpha-hemolysin
Authors:Yamashita, K, Kawauchi, H, Tanaka, Y, Yao, M, Tanaka, I.
Deposit date:2010-09-16
Release date:2011-06-22
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.303 Å)
Cite:2-Methyl-2,4-pentanediol induces spontaneous assembly of staphylococcal alpha-hemolysin into heptameric pore structure
Protein Sci., 20, 2011

223532

数据于2024-08-07公开中

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