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PDB: 66 results

8C1V
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BU of 8c1v by Molmil
SARS-CoV-2 S-trimer (3 RBDs up) bound to TriSb92, fitted into cryo-EM map
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Sb92, ...
Authors:Huiskonen, J.T, Rissanen, I, Hannula, L.
Deposit date:2022-12-21
Release date:2023-04-19
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Intranasal trimeric sherpabody inhibits SARS-CoV-2 including recent immunoevasive Omicron subvariants.
Nat Commun, 14, 2023
5OXE
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BU of 5oxe by Molmil
Structure of major capsid protein VP1 of Aeropyrum pernix bacilliform virus 1 APBV1
Descriptor: Major virion protein
Authors:Huiskonen, J.T, Ptchelkine, D, Phillpps, S.E.V.
Deposit date:2017-09-06
Release date:2017-11-22
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Unique architecture of thermophilic archaeal virus APBV1 and its genome packaging.
Nat Commun, 8, 2017
5K47
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BU of 5k47 by Molmil
CryoEM structure of the human Polycystin-2/PKD2 TRP channel
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Polycystin-2
Authors:Pike, A.C.W, Grieben, M, Shintre, C.A, Tessitore, A, Shrestha, L, Mukhopadhyay, S, Mahajan, P, Chalk, R, Burgess-Brown, N.A, Huiskonen, J.T, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Carpenter, E.P, Structural Genomics Consortium (SGC)
Deposit date:2016-05-20
Release date:2016-08-24
Last modified:2020-10-21
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Structure of the polycystic kidney disease TRP channel Polycystin-2 (PC2).
Nat. Struct. Mol. Biol., 24, 2017
5ACA
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BU of 5aca by Molmil
Structure-based energetics of protein interfaces guide Foot-and-Mouth disease virus vaccine design
Descriptor: VP1, VP2, VP3, ...
Authors:Kotecha, A, Seago, J, Scott, K, Burman, A, Loureiro, S, Ren, J, Porta, C, Ginn, H.M, Jackson, T, Perez-Martin, E, Siebert, C.A, Paul, G, Huiskonen, J.T, Jones, I.M, Esnouf, R.M, Fry, E.E, Maree, F.F, Charleston, B, Stuart, D.I.
Deposit date:2015-08-14
Release date:2015-09-23
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structure-Based Energetics of Protein Interfaces Guide Foot-and-Mouth Disease Vaccine Design
Nat.Struct.Mol.Biol., 22, 2015
6GYN
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BU of 6gyn by Molmil
Structure of human HCN4 hyperpolarization-activated cyclic nucleotide-gated ion channel
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4
Authors:Shintre, C.A, Pike, A.C.W, Tessitore, A, Young, M, Bushell, S.R, Strain-Damerell, C, Mukhopadhyay, S, Burgess-Brown, N.A, Huiskonen, J.T, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Carpenter, E.P, Structural Genomics Consortium (SGC)
Deposit date:2018-06-30
Release date:2019-05-08
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structure of human HCN4 hyperpolarization-activated cyclic nucleotide-gated ion channel
To Be Published
6GYO
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BU of 6gyo by Molmil
Structure of human HCN4 hyperpolarization-activated cyclic nucleotide-gated ion channel in complex with cAMP
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOINOSITOL, 1,2-Distearoyl-sn-glycerophosphoethanolamine, ...
Authors:Shintre, C.A, Pike, A.C.W, Tessitore, A, Young, M, Bushell, S.R, Strain-Damerell, C, Mukhopadhyay, S, Burgess-Brown, N.A, Huiskonen, J.T, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Carpenter, E.P, Structural Genomics Consortium (SGC)
Deposit date:2018-06-30
Release date:2019-05-01
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structure of human HCN4 hyperpolarization-activated cyclic nucleotide-gated ion channel
To Be Published
7Q8B
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BU of 7q8b by Molmil
Leishmania major actin filament in ADP-Pi state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin, MAGNESIUM ION, ...
Authors:Kotila, T, Muniyandi, S, Lappalainen, P, Huiskonen, J.T.
Deposit date:2021-11-11
Release date:2022-05-18
Last modified:2022-06-29
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural basis of rapid actin dynamics in the evolutionarily divergent Leishmania parasite.
Nat Commun, 13, 2022
7Q8C
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BU of 7q8c by Molmil
Leishmania major actin filament in ADP-state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin, MAGNESIUM ION
Authors:Kotila, T, Muniyandi, S, Lappalainen, P, Huiskonen, J.T.
Deposit date:2021-11-11
Release date:2022-05-18
Last modified:2022-06-29
Method:ELECTRON MICROSCOPY (2.72 Å)
Cite:Structural basis of rapid actin dynamics in the evolutionarily divergent Leishmania parasite.
Nat Commun, 13, 2022
7Q8S
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BU of 7q8s by Molmil
Leishmania major ADP-actin filament decorated with Leishmania major cofilin
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADF/Cofilin, Actin, ...
Authors:Kotila, T, Muniyandi, S, Lappalainen, P, Huiskonen, J.T.
Deposit date:2021-11-11
Release date:2022-05-18
Last modified:2022-06-29
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural basis of rapid actin dynamics in the evolutionarily divergent Leishmania parasite.
Nat Commun, 13, 2022
7B0A
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BU of 7b0a by Molmil
Puumala virus-like particle glycoprotein spike and lattice contacts model.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope polyprotein, ...
Authors:Rissanen, I, Stass, R, Huiskonen, J.T, Bowden, T.A.
Deposit date:2020-11-19
Release date:2020-12-16
Last modified:2021-01-13
Method:ELECTRON MICROSCOPY (13.9 Å)
Cite:Molecular rationale for antibody-mediated targeting of the hantavirus fusion glycoprotein.
Elife, 9, 2020
7B09
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BU of 7b09 by Molmil
Puumala virus glycoprotein (Gc) in complex with fab fragment P-4G2.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope polyprotein, ...
Authors:Rissanen, I, Stass, R, Huiskonen, J.T, Bowden, T.A.
Deposit date:2020-11-19
Release date:2020-12-16
Last modified:2021-01-13
Method:ELECTRON MICROSCOPY (13.4 Å)
Cite:Molecular rationale for antibody-mediated targeting of the hantavirus fusion glycoprotein.
Elife, 9, 2020
8BI4
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BU of 8bi4 by Molmil
Helical shell of CCMV capsid protein on DNA origami 6HB-2k
Descriptor: Coat protein
Authors:Kumpula, E.-P, Seitz, I, Kostiainen, M.A, Huiskonen, J.T.
Deposit date:2022-11-01
Release date:2023-07-05
Last modified:2023-10-25
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:DNA-origami-directed virus capsid polymorphism.
Nat Nanotechnol, 18, 2023
6HY0
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BU of 6hy0 by Molmil
Atomic models of P1, P4 C-terminal fragment and P8 fitted in the bacteriophage phi6 nucleocapsid reconstructed with icosahedral symmetry
Descriptor: Major Outer Capsid Protein P8, Major inner protein P1, Packaging Enzyme P4
Authors:El Omari, K, Ilca, S.L, Stuart, D.I, Huiskonen, J.T.
Deposit date:2018-10-18
Release date:2019-06-12
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Multiple liquid crystalline geometries of highly compacted nucleic acid in a dsRNA virus.
Nature, 570, 2019
6J7V
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BU of 6j7v by Molmil
Structure of HRPV6 VP5 fitted in the cryoEM density of the spike
Descriptor: VP5
Authors:El Omari, K, Li, S, Huiskonen, J.T, Stuart, D.I.
Deposit date:2019-01-18
Release date:2019-03-06
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (16 Å)
Cite:The structure of a prokaryotic viral envelope protein expands the landscape of membrane fusion proteins.
Nat Commun, 10, 2019
8P0W
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BU of 8p0w by Molmil
Structure of the human Commander complex COMMD ring
Descriptor: COMM domain-containing protein 1, COMM domain-containing protein 10, COMM domain-containing protein 2, ...
Authors:Kumpula, E.P, Laulumaa, S, Huiskonen, J.T.
Deposit date:2023-05-11
Release date:2024-03-20
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structure and interactions of the endogenous human Commander complex.
Nat.Struct.Mol.Biol., 31, 2024
8P0X
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BU of 8p0x by Molmil
Structure of the human Commander complex Retriever Subcomplex
Descriptor: Coiled-coil domain-containing protein 22, Coiled-coil domain-containing protein 93, VPS35 endosomal protein-sorting factor-like, ...
Authors:Kumpula, E.P, Laulumaa, S, Huiskonen, J.T.
Deposit date:2023-05-11
Release date:2024-03-20
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (7.5 Å)
Cite:Structure and interactions of the endogenous human Commander complex.
Nat.Struct.Mol.Biol., 31, 2024
8P0V
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BU of 8p0v by Molmil
Structure of the human Commander complex coiled coils, DENND10 and partial Retriever subcomplex
Descriptor: Coiled-coil domain-containing protein 22, Coiled-coil domain-containing protein 93, DENN domain-containing protein 10, ...
Authors:Kumpula, E.P, Laulumaa, S, Huiskonen, J.T.
Deposit date:2023-05-10
Release date:2024-03-20
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (6.5 Å)
Cite:Structure and interactions of the endogenous human Commander complex.
Nat.Struct.Mol.Biol., 31, 2024
4BOM
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BU of 4bom by Molmil
Structure of herpesvirus fusion glycoprotein B-bilayer complex revealing the protein-membrane and lateral protein-protein interaction
Descriptor: ENVELOPE GLYCOPROTEIN B
Authors:Maurer, U.E, Zeev-Ben-Mordehai, Z, Pandurangan, A.P, Cairns, T.M, Hannah, B.P, Whitbeck, J.C, Eisenberg, R.J, Cohen, G.H, Topf, M, Huiskonen, J.T, Grunewald, K.
Deposit date:2013-05-21
Release date:2013-07-31
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (27 Å)
Cite:The structure of herpesvirus fusion glycoprotein B-bilayer complex reveals the protein-membrane and lateral protein-protein interaction.
Structure, 21, 2013
4C53
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BU of 4c53 by Molmil
Crystal Structure of Guanarito virus GP2 in the post-fusion conformation
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, PRE-GLYCOPROTEIN POLYPROTEIN GP COMPLEX, ...
Authors:Parsy, M, Huiskonen, J.T, Harlos, K, Bowden, T.A.
Deposit date:2013-09-10
Release date:2013-10-02
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (4.14 Å)
Cite:Crystal Structure of Venezuelan Hemorrhagic Fever Virus Fusion Glycoprotein Reveals a Class 1 Post-Fusion Architecture with Extensive Glycosylation.
J.Virol., 87, 2013
5OPG
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BU of 5opg by Molmil
Structure of the Hantaan virus Gn glycoprotein ectodomain
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, SULFATE ION, ...
Authors:Rissanen, I, Stass, R, Zeltina, A, Li, S, Hepojoki, J, Harlos, K, Gilbert, R.J.C, Huiskonen, J.T, Bowden, T.A.
Deposit date:2017-08-09
Release date:2017-08-23
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural Transitions of the Conserved and Metastable Hantaviral Glycoprotein Envelope.
J. Virol., 91, 2017
5AC9
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BU of 5ac9 by Molmil
Structure-based energetics of protein interfaces guide Foot-and-Mouth disease virus vaccine design
Descriptor: VP1, VP2, VP3, ...
Authors:Kotecha, A, Seago, J, Scott, K, Burman, A, Loureiro, S, Ren, J, Porta, C, Ginn, H.M, Jackson, T, PerezMartin, E, Siebert, C.A, Paul, G, Huiskonen, J.T, Jones, I.M, Esnouf, R.M, Fry, E.E, Maree, F.F, Charleston, B, Stuart, D.I.
Deposit date:2015-08-14
Release date:2015-09-23
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structure-Based Energetics of Protein Interfaces Guide Foot-and-Mouth Disease Vaccine Design
Nat.Struct.Mol.Biol., 22, 2015
5D8A
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BU of 5d8a by Molmil
Crystal structure of recombinant foot-and-mouth-disease virus A22-H2093F empty capsid
Descriptor: VP1, VP2, VP3, ...
Authors:Kotecha, A, Seago, J, Scott, K, Burman, A, Loureiro, S, Ren, J, Porta, C, Ginn, H.M, Jackson, T, Perez-Martin, E, Siebert, C.A, Paul, G, Huiskonen, J.T, Jones, I.M, Esnouf, R.M, Fry, E.E, Maree, F.F, Charleston, B, Stuart, D.I.
Deposit date:2015-08-16
Release date:2015-09-23
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure-based energetics of protein interfaces guides foot-and-mouth disease virus vaccine design.
Nat.Struct.Mol.Biol., 22, 2015
5DDJ
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BU of 5ddj by Molmil
Crystal structure of recombinant foot-and-mouth-disease virus O1M-S2093Y empty capsid
Descriptor: Foot and mouth disease virus, VP1, VP2, ...
Authors:Kotecha, A, Seago, J, Scott, K, Burman, A, Loureiro, S, Ren, J, Porta, C, Ginn, H.M, Jackson, T, Perez-Martin, E, Siebert, C.A, Paul, G, Huiskonen, J.T, Jones, I.M, Esnouf, R.M, Fry, E.E, Maree, F.F, Charleston, B, Stuart, D.I.
Deposit date:2015-08-25
Release date:2015-09-23
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structure-based energetics of protein interfaces guides foot-and-mouth disease virus vaccine design.
Nat.Struct.Mol.Biol., 22, 2015
1YQ5
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BU of 1yq5 by Molmil
PRD1 vertex protein P5
Descriptor: Minor capsid protein
Authors:Merckel, M.C, Huiskonen, J.T, Goldman, A, Bamford, D.H, Tuma, R.
Deposit date:2005-02-01
Release date:2005-04-26
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:The structure of the bacteriophage PRD1 spike sheds light on the evolution of viral capsid architecture.
Mol.Cell, 18, 2005
1YQ8
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BU of 1yq8 by Molmil
PRD1 vertex protein P5
Descriptor: Minor capsid protein
Authors:Merckel, M.C, Huiskonen, J.T, Goldman, A, Bamford, D.H, Tuma, R.
Deposit date:2005-02-01
Release date:2005-04-26
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The structure of the bacteriophage PRD1 spike sheds light on the evolution of viral capsid architecture.
Mol.Cell, 18, 2005

 

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