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PDB: 17 results

8HZM
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BU of 8hzm by Molmil
A new fluorescent RNA aptamer bound with N, manganese soak
Descriptor: (5~{Z})-5-[[4-[2-hydroxyethyl(methyl)amino]phenyl]methylidene]-3-methyl-2-[(~{E})-2-phenylethenyl]imidazol-4-one, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Huang, K.Y, Ren, A.M.
Deposit date:2023-01-09
Release date:2024-06-19
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis of a small monomeric Clivia fluorogenic RNA with a large Stokes shift.
Nat.Chem.Biol., 2024
8HZE
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BU of 8hze by Molmil
A new fluorescent RNA aptamer bound with N
Descriptor: (5~{Z})-5-[[4-[2-hydroxyethyl(methyl)amino]phenyl]methylidene]-3-methyl-2-[(~{E})-2-phenylethenyl]imidazol-4-one, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Huang, K.Y, Ren, A.M.
Deposit date:2023-01-09
Release date:2024-06-19
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Structural basis of a small monomeric Clivia fluorogenic RNA with a large Stokes shift.
Nat.Chem.Biol., 2024
8HZJ
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BU of 8hzj by Molmil
A new fluorescent RNA aptamer bound with N571
Descriptor: (5~{Z})-5-[[3,5-bis(fluoranyl)-4-oxidanyl-phenyl]methylidene]-3-methyl-2-[(~{E})-2-phenylethenyl]imidazol-4-one, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Huang, K.Y, Ren, A.M.
Deposit date:2023-01-09
Release date:2024-06-19
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural basis of a small monomeric Clivia fluorogenic RNA with a large Stokes shift.
Nat.Chem.Biol., 2024
8HZK
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BU of 8hzk by Molmil
A new fluorescent RNA aptamer bound with N, iridium hexammine soak
Descriptor: (5~{Z})-5-[[4-[2-hydroxyethyl(methyl)amino]phenyl]methylidene]-3-methyl-2-[(~{E})-2-phenylethenyl]imidazol-4-one, DI(HYDROXYETHYL)ETHER, IRIDIUM HEXAMMINE ION, ...
Authors:Huang, K.Y, Ren, A.M.
Deposit date:2023-01-09
Release date:2024-06-19
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis of a small monomeric Clivia fluorogenic RNA with a large Stokes shift.
Nat.Chem.Biol., 2024
8HZF
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BU of 8hzf by Molmil
A new fluorescent RNA aptamer bound with N565
Descriptor: (5~{Z})-5-[[3,5-bis(fluoranyl)-4-oxidanyl-phenyl]methylidene]-2-[(~{E})-2-(4-hydroxyphenyl)ethenyl]-3-methyl-imidazol-4-one, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Huang, K.Y, Ren, A.M.
Deposit date:2023-01-09
Release date:2024-06-19
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural basis of a small monomeric Clivia fluorogenic RNA with a large Stokes shift.
Nat.Chem.Biol., 2024
8HZL
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BU of 8hzl by Molmil
A new fluorescent RNA aptamer_III bound with N
Descriptor: (5~{Z})-5-[[4-[2-hydroxyethyl(methyl)amino]phenyl]methylidene]-3-methyl-2-[(~{E})-2-phenylethenyl]imidazol-4-one, MAGNESIUM ION, RNA (84-MER)
Authors:Huang, K.Y, Ren, A.M.
Deposit date:2023-01-09
Release date:2024-06-19
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural basis of a small monomeric Clivia fluorogenic RNA with a large Stokes shift.
Nat.Chem.Biol., 2024
7EOK
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BU of 7eok by Molmil
Crystal structure of the Pepper aptamer in complex with HBC485
Descriptor: 4-[(~{Z})-1-cyano-2-[5-[2-(dimethylamino)ethyl-methyl-amino]pyrazin-2-yl]ethenyl]benzenecarbonitrile, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Huang, K.Y, Ren, A.M.
Deposit date:2021-04-22
Release date:2021-11-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure-based investigation of fluorogenic Pepper aptamer.
Nat.Chem.Biol., 17, 2021
7EOO
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BU of 7eoo by Molmil
Crystal structure of the Pepper aptamer in complex with HBC525
Descriptor: (~{E})-2-(1,3-benzoxazol-2-yl)-3-[4-[2-hydroxyethyl(methyl)amino]phenyl]prop-2-enenitrile, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Huang, K.Y, Ren, A.M.
Deposit date:2021-04-22
Release date:2021-11-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Structure-based investigation of fluorogenic Pepper aptamer.
Nat.Chem.Biol., 17, 2021
7EOP
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BU of 7eop by Molmil
Crystal structure of the Pepper aptamer in complex with HBC620
Descriptor: 4-[(~{Z})-1-cyano-2-[5-[2-hydroxyethyl(methyl)amino]thieno[3,2-b]thiophen-2-yl]ethenyl]benzenecarbonitrile, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Huang, K.Y, Ren, A.M.
Deposit date:2021-04-22
Release date:2021-11-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure-based investigation of fluorogenic Pepper aptamer.
Nat.Chem.Biol., 17, 2021
7EOG
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BU of 7eog by Molmil
Crystal structure of the Pepper aptamer in complex with HBC, iridium hexammine soak
Descriptor: 4-[(~{Z})-1-cyano-2-[4-[2-hydroxyethyl(methyl)amino]phenyl]ethenyl]benzenecarbonitrile, GUANOSINE-5'-TRIPHOSPHATE, IRIDIUM HEXAMMINE ION, ...
Authors:Huang, K.Y, Ren, A.M.
Deposit date:2021-04-22
Release date:2021-11-24
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure-based investigation of fluorogenic Pepper aptamer.
Nat.Chem.Biol., 17, 2021
7EOL
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BU of 7eol by Molmil
Crystal structure of the Pepper aptamer in complex with HBC497
Descriptor: 4-[(~{Z})-1-cyano-2-[5-[2-hydroxyethyl(methyl)amino]pyrazin-2-yl]ethenyl]benzenecarbonitrile, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Huang, K.Y, Ren, A.M.
Deposit date:2021-04-22
Release date:2021-11-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.309 Å)
Cite:Structure-based investigation of fluorogenic Pepper aptamer.
Nat.Chem.Biol., 17, 2021
7EOJ
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BU of 7eoj by Molmil
Crystal structure of the Pepper aptamer in complex with HBC, cesium soak
Descriptor: 4-[(~{Z})-1-cyano-2-[4-[2-hydroxyethyl(methyl)amino]phenyl]ethenyl]benzenecarbonitrile, CESIUM ION, MAGNESIUM ION, ...
Authors:Huang, K.Y, Ren, A.M.
Deposit date:2021-04-22
Release date:2021-11-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Structure-based investigation of fluorogenic Pepper aptamer.
Nat.Chem.Biol., 17, 2021
7EOI
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BU of 7eoi by Molmil
Crystal structure of the Pepper aptamer in complex with HBC, manganese soak
Descriptor: 4-[(~{Z})-1-cyano-2-[4-[2-hydroxyethyl(methyl)amino]phenyl]ethenyl]benzenecarbonitrile, MAGNESIUM ION, MANGANESE (II) ION, ...
Authors:Huang, K.Y, Ren, A.M.
Deposit date:2021-04-22
Release date:2021-11-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Structure-based investigation of fluorogenic Pepper aptamer.
Nat.Chem.Biol., 17, 2021
7EOM
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BU of 7eom by Molmil
Crystal structure of the Pepper aptamer in complex with HBC508
Descriptor: 4-[(~{Z})-1-cyano-2-[6-[2-hydroxyethyl(methyl)amino]pyridin-3-yl]ethenyl]benzenecarbonitrile, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Huang, K.Y, Ren, A.M.
Deposit date:2021-04-22
Release date:2021-11-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.703 Å)
Cite:Structure-based investigation of fluorogenic Pepper aptamer.
Nat.Chem.Biol., 17, 2021
7EON
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BU of 7eon by Molmil
Crystal structure of the Pepper aptamer in complex with HBC514
Descriptor: 4-[(~{Z})-1-cyano-2-[4-[2-(dimethylamino)ethyl-methyl-amino]phenyl]ethenyl]benzenecarbonitrile, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Huang, K.Y, Ren, A.M.
Deposit date:2021-04-22
Release date:2021-11-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure-based investigation of fluorogenic Pepper aptamer.
Nat.Chem.Biol., 17, 2021
7EOH
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BU of 7eoh by Molmil
Crystal structure of the Pepper aptamer in complex with HBC
Descriptor: 4-[(~{Z})-1-cyano-2-[4-[2-hydroxyethyl(methyl)amino]phenyl]ethenyl]benzenecarbonitrile, MAGNESIUM ION, Pepper (49-MER)
Authors:Huang, K.Y, Ren, A.M.
Deposit date:2021-04-22
Release date:2021-11-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.637 Å)
Cite:Structure-based investigation of fluorogenic Pepper aptamer.
Nat.Chem.Biol., 17, 2021
3ONS
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BU of 3ons by Molmil
Crystal structure of Human Ubiquitin in a new crystal form
Descriptor: Ubiquitin
Authors:Amodeo, G.A, Huang, K.Y, Mcdermott, A.E, Tong, L.
Deposit date:2010-08-30
Release date:2011-02-23
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The structure of human ubiquitin in 2-methyl-2,4-pentanediol: a new conformational switch.
Protein Sci., 20, 2011

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