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PDB: 220 件

6Q8U
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Structure of the standard kink turn HmKt-7 variant A2bm6A bound with AfL7Ae protein
分子名称: 50S ribosomal protein L7Ae, RNA (5'-R(*CP*GP*GP*CP*GP*AP*AP*GP*(6MZ)P*AP*CP*CP*GP*GP*GP*GP*AP*GP*CP*CP*G)-3'), SODIUM ION
著者Huang, L, Lilley, D.M.J.
登録日2018-12-16
公開日2019-07-03
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Effect of methylation of adenine N6on kink turn structure depends on location.
Rna Biol., 16, 2019
5G4U
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Association of three two-k-turn units based on Kt-7 3bU,3nU, forming a triangular-shaped structure
分子名称: 50S RIBOSOMAL PROTEIN L7AE, HMKT-7
著者Huang, L, Lilley, D.M.J.
登録日2016-05-17
公開日2016-09-28
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献A Quasi-Cyclic RNA Nano-Scale Molecular Object Constructed Using Kink Turns.
Nanoscale, 8, 2016
6YML
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BU of 6yml by Molmil
Crystal structure of the SAM-SAH riboswitch with decarboxylated SAH
分子名称: 5'-S-(3-aminopropyl)-5'-thioadenosine, ADENOSINE MONOPHOSPHATE, Chains: A,C, ...
著者Huang, L, Lilley, D.M.J.
登録日2020-04-08
公開日2020-07-22
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.17 Å)
主引用文献Crystal structure and ligand-induced folding of the SAM/SAH riboswitch.
Nucleic Acids Res., 48, 2020
5NDH
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BU of 5ndh by Molmil
The structure of the G. violaceus guanidine II riboswitch P2 stem-loop
分子名称: GUANIDINE, MAGNESIUM ION, RNA (5'-R(*GP*(CBV)P*GP*GP*GP*GP*AP*CP*GP*AP*CP*CP*CP*CP*GP*C)-3'), ...
著者Huang, L, Wang, J, Lilley, D.M.J.
登録日2017-03-08
公開日2017-05-31
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献The Structure of the Guanidine-II Riboswitch.
Cell Chem Biol, 24, 2017
6YMM
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BU of 6ymm by Molmil
Crystal structure of the SAM-SAH riboswitch with SAM from space group P312
分子名称: Chains: A, Chains: B,D, S-ADENOSYLMETHIONINE, ...
著者Huang, L, Lilley, D.M.J.
登録日2020-04-08
公開日2020-07-22
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure and ligand-induced folding of the SAM/SAH riboswitch.
Nucleic Acids Res., 48, 2020
5NEQ
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BU of 5neq by Molmil
The structure of the G. violaceus guanidine II riboswitch P1 stem-loop with aminoguanidine
分子名称: AMINOGUANIDINE, RNA (5'-R(*GP*GP*UP*GP*GP*GP*GP*AP*CP*GP*AP*CP*CP*CP*CP*AP*(CBV)P*C)-3'), SODIUM ION, ...
著者Huang, L, Wang, J, Lilley, D.M.J.
登録日2017-03-11
公開日2017-05-31
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献The Structure of the Guanidine-II Riboswitch.
Cell Chem Biol, 24, 2017
6FZ0
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BU of 6fz0 by Molmil
Crystal structure of the metY SAM V riboswitch
分子名称: MAGNESIUM ION, S-ADENOSYLMETHIONINE, SODIUM ION, ...
著者Huang, L, Lilley, D.M.J.
登録日2018-03-13
公開日2018-07-04
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.499 Å)
主引用文献Structure and ligand binding of the SAM-V riboswitch.
Nucleic Acids Res., 46, 2018
5NWQ
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BU of 5nwq by Molmil
The structure of the thermobifida fusca guanidine III riboswitch with guanidine.
分子名称: GUANIDINE, Guanidine III riboswitch, MAGNESIUM ION, ...
著者Huang, L, Wang, J, Lilley, D.M.J.
登録日2017-05-08
公開日2017-10-18
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Structure of the Guanidine III Riboswitch.
Cell Chem Biol, 24, 2017
5NZD
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BU of 5nzd by Molmil
The structure of the thermobifida fusca guanidine III riboswitch in space group P212121.
分子名称: ACETATE ION, MAGNESIUM ION, SODIUM ION, ...
著者Huang, L, Wang, J, Lilley, D.M.J.
登録日2017-05-13
公開日2017-10-18
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.007 Å)
主引用文献Structure of the Guanidine III Riboswitch.
Cell Chem Biol, 24, 2017
5NZ3
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BU of 5nz3 by Molmil
The structure of the thermobifida fusca guanidine III riboswitch with methylguanidine
分子名称: 1-METHYLGUANIDINE, MAGNESIUM ION, RNA (41-MER), ...
著者Huang, L, Wang, J, Lilley, D.M.J.
登録日2017-05-12
公開日2017-10-18
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.059 Å)
主引用文献Structure of the Guanidine III Riboswitch.
Cell Chem Biol, 24, 2017
5LR4
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BU of 5lr4 by Molmil
RNA duplex has central consecutive GA pairs flanked by G-U basepairs with a methyl group on the adenine N6
分子名称: RNA (5'-R(*GP*(CBV)P*CP*GP*GP*(6MZ)P*UP*GP*GP*C)-3'), SODIUM ION
著者Huang, L, Lilley, D.M.J.
登録日2016-08-18
公開日2017-06-21
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Control of box C/D snoRNP assembly by N(6)-methylation of adenine.
EMBO Rep., 18, 2017
1LXD
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BU of 1lxd by Molmil
CRYSTAL STRUCTURE OF THE RAS INTERACTING DOMAIN OF RALGDS, A GUANINE NUCLEOTIDE DISSOCIATION STIMULATOR OF RAL PROTEIN
分子名称: RALGDSB
著者Huang, L, Weng, X.W, Hofer, F, Martin, G.S, Kim, S.H.
登録日1997-03-05
公開日1998-03-11
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Three-dimensional structure of the Ras-interacting domain of RalGDS.
Nat.Struct.Biol., 4, 1997
3L70
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BU of 3l70 by Molmil
Cytochrome BC1 complex from chicken with trifloxystrobin bound
分子名称: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, CARDIOLIPIN, Coenzyme Q10, ...
著者Huang, L, Berry, E.A.
登録日2009-12-27
公開日2010-02-02
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Famoxadone and related inhibitors bind like methoxy acrylate inhibitors in the Qo site of the BC1 compl and fix the rieske iron-sulfur protein in a positio close to but distinct from that seen with stigmatellin and other "distal" Qo inhibitors.
To be Published
3L75
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BU of 3l75 by Molmil
Cytochrome BC1 complex from chicken with fenamidone bound
分子名称: (5S)-5-methyl-2-(methylsulfanyl)-5-phenyl-3-(phenylamino)-3,5-dihydro-4H-imidazol-4-one, 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, AZIDE ION, ...
著者Huang, L, Berry, E.A.
登録日2009-12-28
公開日2010-02-02
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.79 Å)
主引用文献FAMOXADONE AND RELATED INHIBITORS BIND LIKE METHOXY ACRYLATE INHIBITORS IN THE Qo SITE OF THE BC1 COMPL AND FIX THE RIESKE IRON-SULFUR PROTEIN IN A POSITIO CLOSE TO BUT DISTINCT FROM THAT SEEN WITH STIGMATELLIN AND OTHER "DISTAL" Qo INHIBITORS.
To be Published
6J3P
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BU of 6j3p by Molmil
Crystal structure of the human GCN5 bromodomain in complex with compound (R,R)-36n
分子名称: 2-{[(3R,5R)-5-(2,3-dihydro-1,4-benzodioxin-6-yl)-1-methylpiperidin-3-yl]amino}-3-methyl-3,5-dihydro-4H-pyrrolo[3,2-d]pyrimidin-4-one, Histone acetyltransferase KAT2A
著者Huang, L.Y, Li, H, Niu, L, Wu, C.Y, Yu, Y.M, Li, L.L, Yang, S.Y.
登録日2019-01-05
公開日2019-05-01
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.598 Å)
主引用文献Discovery of Pyrrolo[3,2- d]pyrimidin-4-one Derivatives as a New Class of Potent and Cell-Active Inhibitors of P300/CBP-Associated Factor Bromodomain.
J.Med.Chem., 62, 2019
2A06
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BU of 2a06 by Molmil
Bovine cytochrome bc1 complex with stigmatellin bound
分子名称: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, AZIDE ION, CARDIOLIPIN, ...
著者Huang, L.S, Cobessi, D, Tung, E.Y, Berry, E.A.
登録日2005-06-16
公開日2005-06-21
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Binding of the Respiratory Chain Inhibitor Antimycin to the Mitochondrial bc(1) Complex: A New Crystal Structure Reveals an Altered Intramolecular Hydrogen-bonding Pattern.
J.Mol.Biol., 351, 2005
3L71
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BU of 3l71 by Molmil
Cytochrome BC1 complex from chicken with azoxystrobin bound
分子名称: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, CARDIOLIPIN, Coenzyme Q10, ...
著者Huang, L, Berry, E.A.
登録日2009-12-27
公開日2010-02-02
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.84 Å)
主引用文献Famoxadone and related inhibitors bind like methoxy acrylate inhibitors in the Qo site of the BC1 compl and fix the rieske iron-sulfur protein in a positio close to but distinct from that seen with stigmatellin and other "DISTAL" Qo inhibitors.
To be Published
6TF0
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BU of 6tf0 by Molmil
Crystal structure of the ADP-binding domain of the NAD+ riboswitch with Nicotinamide adenine dinucleotide, reduced (NADH)
分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Chains: A, MAGNESIUM ION, ...
著者Huang, L, Lilley, D.M.J.
登録日2019-11-12
公開日2020-09-23
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure and ligand binding of the ADP-binding domain of the NAD+ riboswitch.
Rna, 26, 2020
6TFE
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BU of 6tfe by Molmil
Crystal structure of the ADP-binding domain of the NAD+ riboswitch with N6-Methyl-adenosine-5'-triphosphate (m6ATP)
分子名称: BROMIDE ION, Chains: A, MAGNESIUM ION, ...
著者Huang, L, Lilley, D.M.J.
登録日2019-11-14
公開日2020-09-23
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure and ligand binding of the ADP-binding domain of the NAD+ riboswitch.
Rna, 26, 2020
3L74
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BU of 3l74 by Molmil
Cytochrome BC1 complex from chicken with famoxadone bound
分子名称: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, AZIDE ION, CARDIOLIPIN, ...
著者Huang, L, Berry, E.A.
登録日2009-12-28
公開日2010-02-02
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.76 Å)
主引用文献Famoxadone and related inhibitors bind like methoxy acrylate inhibitors in the Qo site of the BC1 compl and fix the rieske iron-sulfur protein in a positio close to but distinct from that seen with stigmatellin and other "DISTAL" Qo inhibitors.
To be Published
6TB7
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BU of 6tb7 by Molmil
Crystal structure of the ADP-binding domain of the NAD+ riboswitch with Adenosine monophosphate (AMP)
分子名称: ADENOSINE MONOPHOSPHATE, BROMIDE ION, MAGNESIUM ION, ...
著者Huang, L, Lilley, D.M.J.
登録日2019-11-01
公開日2020-09-30
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2.53 Å)
主引用文献Structure and ligand binding of the ADP-binding domain of the NAD + riboswitch.
Rna, 26, 2020
6TFH
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BU of 6tfh by Molmil
Crystal structure of the ADP-binding domain of the NAD+ riboswitch with Nicotinamide adenine dinucleotide, reduced (NADH); soaking with Manganese(II) (Mn2+)
分子名称: Chains: A, MANGANESE (II) ION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
著者Huang, L, Lilley, D.M.J.
登録日2019-11-14
公開日2020-09-23
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Structure and ligand binding of the ADP-binding domain of the NAD+ riboswitch.
Rna, 26, 2020
3L73
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BU of 3l73 by Molmil
Cytochrome BC1 complex from chicken with triazolone inhibitor
分子名称: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, 4-[7-(3,3-dimethylbut-1-yn-1-yl)naphthalen-1-yl]-5-methoxy-2-methyl-2,4-dihydro-3H-1,2,4-triazol-3-one, CARDIOLIPIN, ...
著者Huang, L, Berry, E.A.
登録日2009-12-27
公開日2010-02-02
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3.04 Å)
主引用文献Famoxadone and related inhibitors bind like methoxy acrylate inhibitors in the Qo site of the BC1 compl and fix the rieske iron-sulfur protein in a positio close to but distinct from that seen with stigmatellin and other "DISTAL" Qo inhibitors.
To be Published
6TFG
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BU of 6tfg by Molmil
Crystal structure of the ADP-binding domain of the NAD+ riboswitch with Adenosine 3-phosphate 5-phosphosulfate (APPS)
分子名称: 3'-PHOSPHATE-ADENOSINE-5'-PHOSPHATE SULFATE, Chains: A, MAGNESIUM ION, ...
著者Huang, L, Lilley, D.M.J.
登録日2019-11-14
公開日2020-09-23
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Structure and ligand binding of the ADP-binding domain of the NAD+ riboswitch.
Rna, 26, 2020
3TGU
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BU of 3tgu by Molmil
Cytochrome bc1 complex from chicken with pfvs-designed moa inhibitor bound
分子名称: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, CARDIOLIPIN, Coenzyme Q10, ...
著者Huang, L.-S, Yang, G.-F, Berry, E.A.
登録日2011-08-17
公開日2012-07-04
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Computational discovery of picomolar Q(o) site inhibitors of cytochrome bc1 complex.
J.Am.Chem.Soc., 134, 2012

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