Loading
PDBj
English日本語简体中文繁體中文한국어
✖
ﾒﾆｭｰPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 45 件
1IZ4
DownloadVisualize
BU of 1iz4 by Molmil
Pyrococcus furiosus PCNA mutant (Met73Leu/Asp143Ala): tetragonal form
分子名称: Proliferating cell nuclear antigen
著者Matsumiya, S, Ishino, S, Ishino, Y, Morikawa, K.
登録日2002-09-21
公開日2003-04-01
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Intermolecular ion pairs maintain the toroidal structure of Pyrococcus furiosus PCNA
PROTEIN SCI., 12, 2003
1IZ5
DownloadVisualize
BU of 1iz5 by Molmil
Pyrococcus furiosus PCNA mutant (Met73Leu, Asp143Ala, Asp147Ala): orthorhombic form
分子名称: Proliferating cell nuclear antigen
著者Matsumiya, S, Ishino, S, Ishino, Y, Morikawa, K.
登録日2002-09-23
公開日2003-04-01
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Intermolecular ion pairs maintain the toroidal structure of Pyrococcus furiosus PCNA
PROTEIN SCI., 12, 2003
1GE8
DownloadVisualize
BU of 1ge8 by Molmil
PROLIFERATING CELL NUCLEAR ANTIGEN (PCNA) HOMOLOG FROM PYROCOCCUS FURIOSUS
分子名称: PROLIFERATION CELL NUCLEAR ANTIGEN
著者Matsumiya, S, Ishino, Y, Morikawa, K.
登録日2000-10-18
公開日2001-01-24
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of an archaeal DNA sliding clamp: proliferating cell nuclear antigen from Pyrococcus furiosus.
Protein Sci., 10, 2001
5X18
DownloadVisualize
BU of 5x18 by Molmil
Crystal structure of Casein kinase I homolog 1
分子名称: Casein kinase I homolog 1, GLYCEROL, MALONIC ACID
著者Kikuchi, M, Shinohara, Y, Ueda, H.R, Umehara, T.
登録日2017-01-25
公開日2017-10-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Temperature-Sensitive Substrate and Product Binding Underlie Temperature-Compensated Phosphorylation in the Clock
Mol. Cell, 67, 2017
5X17
DownloadVisualize
BU of 5x17 by Molmil
Crystal structure of murine CK1d in complex with ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, Casein kinase I isoform delta, SULFATE ION
著者Kikuchi, M, Shinohara, Y, Ueda, H.R, Umehara, T.
登録日2017-01-25
公開日2017-10-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Temperature-Sensitive Substrate and Product Binding Underlie Temperature-Compensated Phosphorylation in the Clock
Mol. Cell, 67, 2017
7E15
DownloadVisualize
BU of 7e15 by Molmil
Protein ternary complex working for DNA replication initiation
分子名称: DNA polymerase II small subunit, Gins51, SsDNA-specific exonuclease
著者Oyama, T, Ishino, Y.
登録日2021-01-30
公開日2021-10-06
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Family D DNA polymerase interacts with GINS to promote CMG-helicase in the archaeal replisome.
Nucleic Acids Res., 50, 2022
5CZD
DownloadVisualize
BU of 5czd by Molmil
The complex structure of VinK with VinL
分子名称: 1,1'-ethane-1,2-diyldipyrrolidine-2,5-dione, 4'-PHOSPHOPANTETHEINE, Acyl-carrier-protein, ...
著者Miyanaga, A, Iwasawa, S, Shinohara, Y, Kudo, F, Eguchi, T.
登録日2015-07-31
公開日2016-02-03
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.34 Å)
主引用文献Structure-based analysis of the molecular interactions between acyltransferase and acyl carrier protein in vicenistatin biosynthesis.
Proc.Natl.Acad.Sci.USA, 113, 2016
1DQ3
DownloadVisualize
BU of 1dq3 by Molmil
CRYSTAL STRUCTURE OF AN ARCHAEAL INTEIN-ENCODED HOMING ENDONUCLEASE PI-PFUI
分子名称: ENDONUCLEASE, ZINC ION
著者Ichiyanagi, K, Ishino, Y, Morikawa, K.
登録日1999-12-30
公開日2000-07-05
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of an archaeal intein-encoded homing endonuclease PI-PfuI.
J.Mol.Biol., 300, 2000
5CZC
DownloadVisualize
BU of 5czc by Molmil
The structure of VinK
分子名称: CALCIUM ION, GLYCEROL, Malonyl-CoA-[acyl-carrier-protein] transacylase
著者Miyanaga, A, Iwasawa, S, Shinohara, Y, Kudo, F, Eguchi, T.
登録日2015-07-31
公開日2016-02-03
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure-based analysis of the molecular interactions between acyltransferase and acyl carrier protein in vicenistatin biosynthesis.
Proc.Natl.Acad.Sci.USA, 113, 2016
3A2F
DownloadVisualize
BU of 3a2f by Molmil
Crystal Structure of Pyrococcus furiosus DNA polymerase/PCNA monomer mutant complex
分子名称: DNA polymerase, DNA polymerase sliding clamp
著者Nishida, H, Ishino, Y, Morikawa, K.
登録日2009-05-15
公開日2009-11-03
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (2.67 Å)
主引用文献Structural determinant for switching between the polymerase and exonuclease modes in the PCNA-replicative DNA polymerase complex
To be Published
7DD4
DownloadVisualize
BU of 7dd4 by Molmil
Solution structure of an RNA derived from the joint region of the TAR and PolyA stems of HIV-1 genomic RNA
分子名称: RNA (36-MER)
著者Obayashi, C.M, Shinohara, Y, Masuda, T, Kawai, G.
登録日2020-10-27
公開日2021-06-09
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Influence of the 5'-terminal sequences on the 5'-UTR structure of HIV-1 genomic RNA.
Sci Rep, 11, 2021
2CFM
DownloadVisualize
BU of 2cfm by Molmil
ATP-DEPENDENT DNA LIGASE FROM PYROCOCCUS FURIOSUS
分子名称: ADENOSINE MONOPHOSPHATE, MAGNESIUM ION, THERMOSTABLE DNA LIGASE
著者Nishida, H, Ishino, Y, Morikawa, K.
登録日2006-02-22
公開日2006-07-12
最終更新日2019-02-06
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The Closed Structure of an Archaeal DNA Ligase from Pyrococcus Furiosus.
J.Mol.Biol., 360, 2006
2ZJ5
DownloadVisualize
BU of 2zj5 by Molmil
Archaeal DNA helicase Hjm complexed with ADP in form 1
分子名称: ADENOSINE-5'-DIPHOSPHATE, Putative ski2-type helicase, SULFATE ION
著者Oyama, T, Oka, H, Fujikane, R, Ishino, Y, Morikawa, K.
登録日2008-02-29
公開日2009-02-10
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Atomic structures and functional implications of the archaeal RecQ-like helicase Hjm
Bmc Struct.Biol., 9, 2009
2ZJA
DownloadVisualize
BU of 2zja by Molmil
Archaeal DNA helicase Hjm complexed with AMPPCP in form 2
分子名称: PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, Putative ski2-type helicase
著者Oyama, T, Oka, H, Fujikane, R, Ishino, Y, Morikawa, K.
登録日2008-02-29
公開日2009-02-10
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Atomic structures and functional implications of the archaeal RecQ-like helicase Hjm
Bmc Struct.Biol., 9, 2009
2ZJ2
DownloadVisualize
BU of 2zj2 by Molmil
Archaeal DNA helicase Hjm apo state in form 1
分子名称: Putative ski2-type helicase, SULFATE ION
著者Oyama, T, Oka, H, Fujikane, R, Ishino, Y, Morikawa, K.
登録日2008-02-29
公開日2009-02-10
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Atomic structures and functional implications of the archaeal RecQ-like helicase Hjm
Bmc Struct.Biol., 9, 2009
2ZJ8
DownloadVisualize
BU of 2zj8 by Molmil
Archaeal DNA helicase Hjm apo state in form 2
分子名称: Putative ski2-type helicase
著者Oyama, T, Oka, H, Fujikane, R, Ishino, Y, Morikawa, K.
登録日2008-02-29
公開日2009-02-10
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Atomic structures and functional implications of the archaeal RecQ-like helicase Hjm
Bmc Struct.Biol., 9, 2009
3WV5
DownloadVisualize
BU of 3wv5 by Molmil
Complex structure of VinN with 3-methylaspartate
分子名称: (2S,3S)-3-methyl-aspartic acid, Non-ribosomal peptide synthetase
著者Miyanaga, A, Cieslak, J, Shinohara, Y, Kudo, F, Eguchi, T.
登録日2014-05-15
公開日2014-10-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The crystal structure of the adenylation enzyme VinN reveals a unique beta-amino acid recognition mechanism
J.Biol.Chem., 289, 2014
3WV4
DownloadVisualize
BU of 3wv4 by Molmil
Crystal structure of VinN
分子名称: Non-ribosomal peptide synthetase
著者Miyanaga, A, Cieslak, J, Shinohara, Y, Kudo, F, Eguchi, T.
登録日2014-05-15
公開日2014-10-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献The crystal structure of the adenylation enzyme VinN reveals a unique beta-amino acid recognition mechanism
J.Biol.Chem., 289, 2014
3WVN
DownloadVisualize
BU of 3wvn by Molmil
Complex structure of VinN with L-aspartate
分子名称: ASPARTIC ACID, Non-ribosomal peptide synthetase
著者Miyanaga, A, Cieslak, J, Shinohara, Y, Kudo, F, Eguchi, T.
登録日2014-05-30
公開日2014-10-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The crystal structure of the adenylation enzyme VinN reveals a unique beta-amino acid recognition mechanism
J.Biol.Chem., 289, 2014
3ANW
DownloadVisualize
BU of 3anw by Molmil
A protein complex essential initiation of DNA replication
分子名称: Putative uncharacterized protein
著者Oyama, T, Shirai, T, Nagasawa, N, Ishino, Y, Morikawa, K.
登録日2010-09-10
公開日2011-07-27
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Architectures of archaeal GINS complexes, essential DNA replication initiation factors
Bmc Biol., 9, 2011
<12

 

225946

件を2024-10-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon