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PDB: 26 件

3KLR
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Bovine H-protein at 0.88 angstrom resolution
分子名称: GLYCEROL, Glycine cleavage system H protein, SULFATE ION
著者Higashiura, A, Kurakane, T, Matsuda, M, Suzuki, M, Inaka, K, Sato, M, Tanaka, H, Fujiwara, K, Nakagawa, A.
登録日2009-11-09
公開日2010-06-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (0.88 Å)
主引用文献High-resolution X-ray crystal structure of bovine H-protein at 0.88 A resolution
Acta Crystallogr.,Sect.D, 66, 2010
3WDN
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High-resolution X-ray crystal structure of bovine H-protein using a high-pressure cryocooling method
分子名称: GLYCEROL, Glycine cleavage system H protein, mitochondrial
著者Higashiura, A, Nakagawa, A.
登録日2013-06-19
公開日2013-10-30
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (0.86 Å)
主引用文献High-resolution X-ray crystal structure of bovine H-protein using the high-pressure cryocooling method
J.SYNCHROTRON RADIAT., 20, 2013
7YOW
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BU of 7yow by Molmil
Crystal structure of SARS-CoV-2 omicron variant spike receptor-binding domain (RBD) in complex with NCV2SG48 Fab
分子名称: Fab Heavy chain, Fab Light chain, SULFATE ION, ...
著者Yamamoto, A, Higashiura, A.
登録日2022-08-02
公開日2023-04-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Structural basis of spike RBM-specific human antibodies counteracting broad SARS-CoV-2 variants.
Commun Biol, 6, 2023
8I5I
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Crystal structure of SARS-CoV-2 delta variant spike receptor-binding domain (RBD) in complex with NCV2SG53 Fab
分子名称: Fab Heavy chain, Fab Light chain, Spike protein S1
著者Yamamoto, A, Higashiura, A.
登録日2023-01-25
公開日2023-04-19
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (3.06 Å)
主引用文献Structural basis of spike RBM-specific human antibodies counteracting broad SARS-CoV-2 variants.
Commun Biol, 6, 2023
8I5H
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BU of 8i5h by Molmil
Crystal structure of SARS-CoV-2 delta variant spike receptor-binding domain (RBD) in complex with NCV2SG48 Fab
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Fab Heavy chain, Fab Light chain, ...
著者Yamamoto, A, Higashiura, A.
登録日2023-01-25
公開日2023-04-19
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献Structural basis of spike RBM-specific human antibodies counteracting broad SARS-CoV-2 variants.
Commun Biol, 6, 2023
7WNB
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BU of 7wnb by Molmil
Crystal structure of SARS-CoV-2 spike receptor-binding domain (RBD) in complex with NCV2SG48 Fab
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Fab Heavy chain, Fab Light chain, ...
著者Yamamoto, A, Higashiura, A.
登録日2022-01-18
公開日2023-04-19
実験手法X-RAY DIFFRACTION (2.18 Å)
主引用文献Structural basis of spike RBM-specific human antibodies counteracting broad SARS-CoV-2 variants.
Commun Biol, 6, 2023
7WN2
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BU of 7wn2 by Molmil
Crystal structure of SARS-CoV-2 spike receptor-binding domain (RBD) in complex with NCV2SG53 Fab
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Fab Heavy chain, Fab Light chain, ...
著者Yamamoto, A, Higashiura, A.
登録日2022-01-17
公開日2023-04-19
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Structural basis of spike RBM-specific human antibodies counteracting broad SARS-CoV-2 variants.
Commun Biol, 6, 2023
5H5L
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Structure of prostaglandin synthase D of Nilaparvata lugens
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GLUTATHIONE, ...
著者Yamamoto, K, Higashiura, A, Suzuki, S, Nakagawa, A.
登録日2016-11-07
公開日2017-09-20
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.999 Å)
主引用文献Molecular structure of a prostaglandin D synthase requiring glutathione from the brown planthopper, Nilaparvata lugens
Biochem. Biophys. Res. Commun., 492, 2017
2ZZQ
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BU of 2zzq by Molmil
Crystal structure analysis of the HEV capsid protein, PORF2
分子名称: Protein ORF3, Capsid protein
著者Miyazaki, N, Xing, L, Wang, C.-Y, Li, T.-C, Takeda, N, Higashiura, A, Nakagawa, A, Tsukihara, T, Miyamura, T, Cheng, R.H.
登録日2009-02-23
公開日2010-03-09
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3.81 Å)
主引用文献Role of protein domain-modularity in designating capsid assembly and antigenicity
To be Published
5AZ1
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Crystal structure of aldo-keto reductase (AKR2E5) complexed with NADPH
分子名称: 1,2-ETHANEDIOL, ACETATE ION, CALCIUM ION, ...
著者Yamamoto, K, Higashiura, A, Suzuki, M, Nakagawa, A.
登録日2015-09-15
公開日2016-02-10
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural characterization of an aldo-keto reductase (AKR2E5) from the silkworm Bombyx mori
Biochem.Biophys.Res.Commun., 474, 2016
5AZ0
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Crystal structure of aldo-keto reductase (AKR2E5) of the silkworm, Bombyx mori
分子名称: 1,2-ETHANEDIOL, ACETATE ION, CALCIUM ION, ...
著者Yamamoto, K, Higashiura, A, Suzuki, M, Nakagawa, A.
登録日2015-09-15
公開日2016-02-10
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural characterization of an aldo-keto reductase (AKR2E5) from the silkworm Bombyx mori
Biochem.Biophys.Res.Commun., 474, 2016
5ZF1
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Molecular structure of a novel 5,10-methylenetetrahydrofolate dehydrogenase from the silkworm, Bombyx mori
分子名称: 1,2-ETHANEDIOL, 5,10-methylenetetrahydrofolate dehydrogenase, SULFATE ION
著者Haque, R, Higashiura, A, Nakagawa, A, Yamamoto, K.
登録日2018-03-02
公開日2019-01-23
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Molecular structure of a 5,10-methylenetetrahydrofolate dehydrogenase from the silkwormBombyx mori.
FEBS Open Bio, 9, 2019
5ZFG
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BU of 5zfg by Molmil
Crystal structure of a diazinon-metabolizing glutathione S-transferase in the silkworm, Bombyx mori
分子名称: 1,2-ETHANEDIOL, ACETATE ION, Glutathione S-transferase
著者Yamamoto, K, Higashiura, A, Nakagawa, A.
登録日2018-03-06
公開日2018-09-12
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Characterisation of a diazinon-metabolising glutathione S-transferase in the silkworm Bombyx mori by X-ray crystallography and genome editing analysis.
Sci Rep, 8, 2018
5X71
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BU of 5x71 by Molmil
Crystal structure of Rice Dwarf Virus P5 in space group P212121
分子名称: GUANOSINE-5'-MONOPHOSPHATE, mRNA capping enzyme P5
著者Nakamichi, Y, Higashiura, A, Nakagawa, A.
登録日2017-02-23
公開日2018-02-28
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.568 Å)
主引用文献Crystal structure of the capping enzyme P5 from Rice Dwarf Virus
To Be Published
5X70
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Crystal structure of Rice Dwarf Virus P5 in complex with a ssRNA oligomer
分子名称: RNA (5'-R(P*GP*GP*CP*AP*AP*A)-3'), mRNA capping enzyme P5
著者Nakamichi, Y, Higashiura, A, Nakagawa, A.
登録日2017-02-23
公開日2018-02-28
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Crystal structure of capping enzyme from Rice dwarf virus
To Be Published
5X6X
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BU of 5x6x by Molmil
Crystal structure of the capping enzyme P5 from Rice Dwarf Virus
分子名称: 1,2-ETHANEDIOL, mRNA capping enzyme P5
著者Nakamichi, Y, Higashiura, A, Nakagawa, A.
登録日2017-02-23
公開日2018-02-28
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of the capping enzyme P5 from Rice Dwarf Virus
To Be Published
5X6Z
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BU of 5x6z by Molmil
Crystal structure of Rice Dwarf Virus P5 in complex with GTP and GDP
分子名称: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, mRNA capping enzyme P5
著者Nakamichi, Y, Higashiura, A, Nakagawa, A.
登録日2017-02-23
公開日2018-02-28
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of the capping enzyme P5 from Rice Dwarf Virus
To Be Published
5X6Y
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BU of 5x6y by Molmil
Crystal structure of Rice Dwarf Virus P5 in complex with S-adenosylmethionine
分子名称: 1,2-ETHANEDIOL, CITRATE ANION, S-ADENOSYLMETHIONINE, ...
著者Nakamichi, Y, Higashiura, A, Nakagawa, A.
登録日2017-02-23
公開日2018-02-28
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of the capping enzyme P5 from Rice Dwarf Virus
To Be Published
3VK9
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BU of 3vk9 by Molmil
Crystal structure of delta-class glutathione transferase from silkmoth
分子名称: GLYCEROL, Glutathione S-transferase delta
著者Kakuta, Y, Usuda, K, Higashiura, A, Suzuki, M, Nakagawa, A, Kimura, M, Yamamoto, K.
登録日2011-11-10
公開日2012-10-03
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.001 Å)
主引用文献Structural basis for catalytic activity of a silkworm Delta-class glutathione transferase
Biochim.Biophys.Acta, 1820, 2012
3VJJ
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BU of 3vjj by Molmil
Crystal Structure Analysis of the P9-1
分子名称: P9-1
著者Akita, F, Higashiura, A, Suzuki, M, Tsukihara, T, Nakagawa, A, Omura, T.
登録日2011-10-24
公開日2011-12-21
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystallographic analysis reveals octamerization of viroplasm matrix protein P9-1 of Rice black streaked dwarf virus
J.Virol., 86, 2012
3VPT
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BU of 3vpt by Molmil
Crystal structure of Bombyx mori sigma-class glutathione transferase in apo form
分子名称: DI(HYDROXYETHYL)ETHER, Glutathione S-transferase sigma, S-1,2-PROPANEDIOL, ...
著者Yamamoto, K, Higashiura, A, Suzuki, M, Nakagawa, A.
登録日2012-03-13
公開日2013-03-06
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of a Bombyx mori sigma-class glutathione transferase exhibiting prostaglandin E synthase activity
Biochim.Biophys.Acta, 1830, 2013
3VUR
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Crystal structure of Bombyx mori sigma-class glutathione transferase in complex with glutathionesulfonic acid
分子名称: GLUTATHIONE SULFONIC ACID, Glutathione S-transferase sigma, PENTAETHYLENE GLYCOL
著者Yamamoto, K, Higashiura, A, Nakagawa, A, Suzuki, M.
登録日2012-07-05
公開日2013-07-10
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.365 Å)
主引用文献Crystal structure of Bombyx mori sigma-class glutathione transferase in complex with glutathionesulfonic acid
TO BE PUBLISHED
3VPQ
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Crystal structure of Bombyx mori sigma-class glutathione transferase in complex with glutathione
分子名称: DI(HYDROXYETHYL)ETHER, GLUTATHIONE, Glutathione S-transferase sigma, ...
著者Yamamoto, K, Higashiura, A, Nakagawa, A, Suzuki, M.
登録日2012-03-08
公開日2013-03-06
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.702 Å)
主引用文献Crystal structure of a Bombyx mori sigma-class glutathione transferase exhibiting prostaglandin E synthase activity
Biochim.Biophys.Acta, 1830, 2013
3WD6
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Crystal structure of Bombyx mori omega-class glutathione transferase in complex with GSH
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GLUTATHIONE, ...
著者Yamamoto, K, Suzuki, M, Higashiura, A, Nakagawa, A.
登録日2013-06-07
公開日2014-07-16
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Three-dimensional structure of a Bombyx mori Omega-class glutathione transferase.
Biochem.Biophys.Res.Commun., 438, 2013
3WYW
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Structural characterization of catalytic site of a Nilaparvata lugens delta-class glutathione transferase
分子名称: 1,2-ETHANEDIOL, GLUTATHIONE, Glutathione S-transferase
著者Yamamoto, K, Higashiura, A, Nakagawa, A.
登録日2014-09-09
公開日2015-01-14
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural characterization of the catalytic site of a Nilaparvata lugens delta-class glutathione transferase.
Arch.Biochem.Biophys., 566C, 2014

 

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