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PDB: 174 件

2IYW
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Shikimate kinase from Mycobacterium tuberculosis in complex with MgATP, open LID (conf. B)
分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, SHIKIMATE KINASE
著者Hartmann, M.D, Bourenkov, G.P, Oberschall, A, Strizhov, N, Bartunik, H.D.
登録日2006-07-22
公開日2006-10-18
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Mechanism of Phosphoryl Transfer Catalyzed by Shikimate Kinase from Mycobacterium Tuberculosis.
J.Mol.Biol., 364, 2006
2IYS
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Shikimate kinase from Mycobacterium tuberculosis in complex with shikimate, open LID (conf. A)
分子名称: (3R,4S,5R)-3,4,5-TRIHYDROXYCYCLOHEX-1-ENE-1-CARBOXYLIC ACID, CHLORIDE ION, SHIKIMATE KINASE
著者Hartmann, M.D, Bourenkov, G.P, Oberschall, A, Strizhov, N, Bartunik, H.D.
登録日2006-07-21
公開日2006-10-11
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Mechanism of Phosphoryl Transfer Catalyzed by Shikimate Kinase from Mycobacterium Tuberculosis.
J.Mol.Biol., 364, 2006
2IYQ
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Shikimate kinase from Mycobacterium tuberculosis in complex with shikimate and ADP
分子名称: (3R,4S,5R)-3,4,5-TRIHYDROXYCYCLOHEX-1-ENE-1-CARBOXYLIC ACID, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ADENOSINE-5'-DIPHOSPHATE, ...
著者Hartmann, M.D, Bourenkov, G.P, Oberschall, A, Strizhov, N, Bartunik, H.D.
登録日2006-07-21
公開日2006-10-11
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Mechanism of Phosphoryl Transfer Catalyzed by Shikimate Kinase from Mycobacterium Tuberculosis.
J.Mol.Biol., 364, 2006
2IYY
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BU of 2iyy by Molmil
Shikimate kinase from Mycobacterium tuberculosis in complex with shikimate-3-phosphate and SO4
分子名称: CHLORIDE ION, MAGNESIUM ION, PHOSPHATE ION, ...
著者Hartmann, M.D, Bourenkov, G.P, Oberschall, A, Strizhov, N, Bartunik, H.D.
登録日2006-07-22
公開日2006-10-11
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.62 Å)
主引用文献Mechanism of Phosphoryl Transfer Catalyzed by Shikimate Kinase from Mycobacterium Tuberculosis.
J.Mol.Biol., 364, 2006
2JAN
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BU of 2jan by Molmil
TYROSYL-TRNA SYNTHETASE FROM MYCOBACTERIUM TUBERCULOSIS IN UNLIGANDED STATE
分子名称: TYROSYL-TRNA SYNTHETASE
著者Hartmann, M.D, Shkolnaya, L.A, Bourenkov, G.P, Strizhov, N.I, Bartunik, H.D.
登録日2006-11-29
公開日2008-02-05
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献The Structure of Tyrosyl-tRNA Synthetase from Mycobacterium Tuberculosis
To be Published
4USJ
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BU of 4usj by Molmil
N-acetylglutamate kinase from Arabidopsis thaliana in complex with PII from Chlamydomonas reinhardtii
分子名称: ACETYLGLUTAMATE KINASE, CHLOROPLASTIC, ADENOSINE-5'-DIPHOSPHATE, ...
著者Chellamuthu, V.R, Forchhammer, K, Hartmann, M.D.
登録日2014-07-08
公開日2014-12-03
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献A Widespread Glutamine-Sensing Mechanism in the Plant Kingdom.
Cell(Cambridge,Mass.), 159, 2014
4USI
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BU of 4usi by Molmil
Nitrogen regulatory protein PII from Chlamydomonas reinhardtii in complex with MgATP and 2-oxoglutarate
分子名称: 2-OXOGLUTARIC ACID, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Chellamuthu, V.R, Forchhammer, K, Hartmann, M.D.
登録日2014-07-08
公開日2014-12-03
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献A Widespread Glutamine-Sensing Mechanism in the Plant Kingdom.
Cell(Cambridge,Mass.), 159, 2014
8AOQ
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Cereblon isoform 4 from Magnetospirillum gryphiswaldense in complex with compound 20a
分子名称: (3~{S})-3-(phenylsulfonylmethyl)piperidine-2,6-dione, Cereblon isoform 4, ZINC ION
著者Maiwald, S, Heim, C, Hartmann, M.D.
登録日2022-08-08
公開日2023-01-11
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.088 Å)
主引用文献Synthesis of novel glutarimide ligands for the E3 ligase substrate receptor Cereblon (CRBN): Investigation of their binding mode and antiproliferative effects against myeloma cell lines.
Eur.J.Med.Chem., 246, 2023
8AOP
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Cereblon isoform 4 from Magnetospirillum gryphiswaldense in complex with compound 14r
分子名称: (3S)-3-[(3-aminophenyl)sulfanylmethyl]piperidine-2,6-dione, Cereblon isoform 4, PHOSPHATE ION, ...
著者Maiwald, S, Heim, C, Hartmann, M.D.
登録日2022-08-08
公開日2023-01-11
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.944 Å)
主引用文献Synthesis of novel glutarimide ligands for the E3 ligase substrate receptor Cereblon (CRBN): Investigation of their binding mode and antiproliferative effects against myeloma cell lines.
Eur.J.Med.Chem., 246, 2023
9F2C
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BU of 9f2c by Molmil
Archaeal histone protein HTkC from Thermococcus kodakarensis
分子名称: hypothetical protein
著者Hu, Y, Albrecht, R, Hartmann, M.D.
登録日2024-04-22
公開日2024-10-02
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Histones and histone variant families in prokaryotes.
Nat Commun, 15, 2024
9F0E
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BU of 9f0e by Molmil
Bacterial histone protein HBb from Bdellovibrio bacteriovorus bound to DNA
分子名称: DNA (5'-D(P*CP*GP*TP*TP*AP*AP*AP*GP*C)-3'), PHOSPHATE ION, Transcription factor CBF/NF-Y/archaeal histone domain-containing protein
著者Hu, Y, Albrecht, R, Hartmann, M.D.
登録日2024-04-15
公開日2024-06-26
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Bacterial histone HBb from Bdellovibrio bacteriovorus compacts DNA by bending.
Nucleic Acids Res., 52, 2024
6T76
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BU of 6t76 by Molmil
PII-like protein CutA from Nostoc sp. PCC 7120 in apo form
分子名称: Periplasmic divalent cation tolerance protein, SULFATE ION
著者Selim, K.A, Albrecht, R, Forchhammer, K, Hartmann, M.D.
登録日2019-10-21
公開日2020-07-22
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Functional and structural characterization of PII-like protein CutA does not support involvement in heavy metal tolerance and hints at a small-molecule carrying/signaling role.
Febs J., 288, 2021
6T7E
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BU of 6t7e by Molmil
PII-like protein CutA from Nostoc sp. PCC7120 in complex with MES
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Periplasmic divalent cation tolerance protein
著者Selim, K.A, Albrecht, R, Forchhammer, K, Hartmann, M.D.
登録日2019-10-21
公開日2020-07-22
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Functional and structural characterization of PII-like protein CutA does not support involvement in heavy metal tolerance and hints at a small-molecule carrying/signaling role.
Febs J., 288, 2021
9EZZ
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BU of 9ezz by Molmil
Bacterial histone protein HBb from Bdellovibrio bacteriovorus bound to DNA
分子名称: DNA (5'-D(P*AP*GP*CP*CP*C)-3'), DNA (5'-D(P*GP*GP*GP*CP*T)-3'), PHOSPHATE ION, ...
著者Hu, Y, Albrecht, R, Hartmann, M.D.
登録日2024-04-14
公開日2024-06-26
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Bacterial histone HBb from Bdellovibrio bacteriovorus compacts DNA by bending.
Nucleic Acids Res., 52, 2024
8BC6
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BU of 8bc6 by Molmil
Cereblon isoform 4 from Magnetospirillum gryphiswaldense in complex an aspartimide degron peptide
分子名称: Cereblon isoform 4, GLN-MET-GLN-SNN, PHOSPHATE ION, ...
著者Heim, C, Hartmann, M.D.
登録日2022-10-15
公開日2023-01-11
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Identification and structural basis of C-terminal cyclic imides as natural degrons for cereblon.
Biochem.Biophys.Res.Commun., 637, 2022
8BC7
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BU of 8bc7 by Molmil
Cereblon isoform 4 from Magnetospirillum gryphiswaldense in complex an aminoglutarimide degron peptide
分子名称: Cereblon isoform 4, PHE-PHE-GLU-GLN-MET-GLN-QCI, S-Thalidomide, ...
著者Heim, C, Albrecht, R, Spring, A.K, Hartmann, M.D.
登録日2022-10-15
公開日2023-01-11
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.719 Å)
主引用文献Identification and structural basis of C-terminal cyclic imides as natural degrons for cereblon.
Biochem.Biophys.Res.Commun., 637, 2022
8C3H
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BU of 8c3h by Molmil
Cereblon isoform 4 from Magnetospirillum gryphiswaldense in complex a long aspartimide degron peptide
分子名称: Cereblon isoform 4, P3(40), ZINC ION
著者Heim, C, Spring, A.K, Hartmann, M.D.
登録日2022-12-23
公開日2023-02-08
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献Cereblon neo-substrate binding mimics the recognition of the cyclic imide degron.
Biochem.Biophys.Res.Commun., 646, 2023
8CMP
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BU of 8cmp by Molmil
DNA-binding bacterial histone protein HBB from Bdellovibrio bacteriovorus
分子名称: CBFD_NFYB_HMF domain-containing protein
著者Hu, Y, Joiner, J.D, Albrecht, R, Hartmann, M.D.
登録日2023-02-20
公開日2024-03-06
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.06 Å)
主引用文献Bacterial histone HBb from Bdellovibrio bacteriovorus compacts DNA by bending.
Nucleic Acids Res., 52, 2024
5OH9
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BU of 5oh9 by Molmil
Cereblon isoform 4 from Magnetospirillum gryphiswaldense in complex with Thiazolidine-2,4-dione
分子名称: 1,3-thiazole-2,4-dione, Cereblon isoform 4, ZINC ION
著者Boichenko, I, Albrecht, R, Lupas, A.N, Hernandez Alvarez, B, Hartmann, M.D.
登録日2017-07-14
公開日2018-10-10
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Chemical Ligand Space of Cereblon.
Acs Omega, 3, 2018
5OHA
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BU of 5oha by Molmil
Cereblon isoform 4 from Magnetospirillum gryphiswaldense in complex with 2-Thiohydantoin
分子名称: 2-sulfanylideneimidazol-4-one, Cereblon isoform 4, ZINC ION
著者Boichenko, I, Albrecht, R, Lupas, A.N, Hernandez Alvarez, B, Hartmann, M.D.
登録日2017-07-14
公開日2018-10-10
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Chemical Ligand Space of Cereblon.
Acs Omega, 3, 2018
5OH3
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BU of 5oh3 by Molmil
Cereblon isoform 4 from Magnetospirillum gryphiswaldense in complex with Ethosuximide
分子名称: (3~{S})-3-ethyl-3-methyl-pyrrolidine-2,5-dione, Cereblon isoform 4, ZINC ION
著者Boichenko, I, Albrecht, R, Lupas, A.N, Hernandez Alvarez, B, Hartmann, M.D.
登録日2017-07-14
公開日2018-10-10
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Chemical Ligand Space of Cereblon.
Acs Omega, 3, 2018
5OH7
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BU of 5oh7 by Molmil
Cereblon isoform 4 from Magnetospirillum gryphiswaldense in complex with Imidazolidine-2,4-dione (Hydantoin)
分子名称: Cereblon isoform 4, ZINC ION, imidazolidine-2,4-dione
著者Boichenko, I, Albrecht, R, Lupas, A.N, Hernandez Alvarez, B, Hartmann, M.D.
登録日2017-07-14
公開日2018-10-10
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Chemical Ligand Space of Cereblon.
Acs Omega, 3, 2018
5OVT
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BU of 5ovt by Molmil
Thiobacillus denitrificans BPH in complex with Epoxomicin
分子名称: BPH, Epoxomicin, PHOSPHATE ION
著者Fuchs, A.C.D, Albrecht, R, Martin, J, Hartmann, M.D.
登録日2017-08-29
公開日2017-12-06
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Structural characterization of the bacterial proteasome homolog BPH reveals a tetradecameric double-ring complex with unique inner cavity properties.
J. Biol. Chem., 293, 2018
5OVS
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BU of 5ovs by Molmil
Thiobacillus denitrificans BPH
分子名称: BPH
著者Fuchs, A.C.D, Albrecht, R, Martin, J, Hartmann, M.D.
登録日2017-08-29
公開日2017-12-06
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural characterization of the bacterial proteasome homolog BPH reveals a tetradecameric double-ring complex with unique inner cavity properties.
J. Biol. Chem., 293, 2018
5OVU
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BU of 5ovu by Molmil
Cupriavidus metallidurans BPH
分子名称: BETA-PROTEOBACTERIA PROTEASOME HOMOLOGUE, MALONATE ION
著者Fuchs, A.C.D, Albrecht, R, Martin, J, Hartmann, M.D.
登録日2017-08-29
公開日2017-12-06
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural characterization of the bacterial proteasome homolog BPH reveals a tetradecameric double-ring complex with unique inner cavity properties.
J. Biol. Chem., 293, 2018

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