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PDB: 116 results

3BNK
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X-ray crystal structure of Flavoredoxin from Methanosarcina acetivorans
Descriptor: FLAVIN MONONUCLEOTIDE, Flavoredoxin
Authors:Suharti, S, Murakami, K.S, Ferry, J.G.
Deposit date:2007-12-14
Release date:2008-10-28
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural and biochemical characterization of flavoredoxin from the archaeon Methanosarcina acetivorans
Biochemistry, 47, 2008
6N9L
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BU of 6n9l by Molmil
Crystal structure of T. maritima UvrA d117-399 with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, UvrABC system protein A, ZINC ION
Authors:Hartley, S, Case, B, Osuga, M, Hingorani, M.M, Jeruzalmi, D.
Deposit date:2018-12-03
Release date:2019-05-01
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:The ATPase mechanism of UvrA2 reveals the distinct roles of proximal and distal ATPase sites in nucleotide excision repair.
Nucleic Acids Res., 47, 2019
7KZF
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BU of 7kzf by Molmil
High resolution cryo EM analysis of HPV16 identifies minor structural protein L2 and describes capsid flexibility
Descriptor: Major capsid protein L1
Authors:Hartmann, S.R, Goetschius, D.J, Hafenstein, S.
Deposit date:2020-12-10
Release date:2021-02-24
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:High resolution cryo EM analysis of HPV16 identifies minor structural protein L2 and describes capsid flexibility.
Sci Rep, 11, 2021
3M85
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BU of 3m85 by Molmil
Archaeoglobus fulgidus exosome y70a with RNA bound to the active site
Descriptor: 5'-R(*CP*UP*CP*CP*CP*C)-3', Probable exosome complex exonuclease 1, Probable exosome complex exonuclease 2, ...
Authors:Hartung, S, Hopfner, K.-P.
Deposit date:2010-03-17
Release date:2010-04-28
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3 Å)
Cite:Quantitative analysis of processive RNA degradation by the archaeal RNA exosome
Nucleic Acids Res., 38, 2010
3M7N
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BU of 3m7n by Molmil
archaeoglobus fulgidus exosome with RNA bound to the active site
Descriptor: 5'-R(*C*UP*CP*CP*CP*C)-3', Probable exosome complex exonuclease 1, Probable exosome complex exonuclease 2, ...
Authors:Hartung, S, Hopfner, K.-P.
Deposit date:2010-03-16
Release date:2010-04-28
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Quantitative analysis of processive RNA degradation by the archaeal RNA exosome
Nucleic Acids Res., 38, 2010
7UTV
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BU of 7utv by Molmil
CPV Total-Fab Polyclonal B Site Fab (2 of 2)
Descriptor: Capsid protein VP1, Heavy chain antibody fragment, Light chain antibody fragment
Authors:Hartmann, S.R, Hafenstein, S.L, Charnesky, A.J.
Deposit date:2022-04-27
Release date:2023-10-04
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Cryo EM structures map a post vaccination polyclonal antibody response to canine parvovirus.
Commun Biol, 6, 2023
7UTP
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BU of 7utp by Molmil
CPV Affinity Purified Polyclonal Fab A Site Fab
Descriptor: Capsid protein VP1, Heavy chain antibody fragment, Light chain antibody fragment
Authors:Hartmann, S.R, Hafenstein, S.L, Charnesky, A.J.
Deposit date:2022-04-27
Release date:2023-10-04
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Cryo EM structures map a post vaccination polyclonal antibody response to canine parvovirus.
Commun Biol, 6, 2023
7UTR
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BU of 7utr by Molmil
CPV Affinity Purified Polyclonal Fab B Site Fab
Descriptor: Capsid protein VP1, Heavy chain antibody fragment, Light chain antibody fragment
Authors:Hartmann, S.R, Hafenstein, S.L, Charnesky, A.J.
Deposit date:2022-04-27
Release date:2023-10-04
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Cryo EM structures map a post vaccination polyclonal antibody response to canine parvovirus.
Commun Biol, 6, 2023
7UTS
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BU of 7uts by Molmil
CPV Total-Fab Polyclonal A Site Fab
Descriptor: Capsid protein VP1, Heavy chain antibody fragment, Light chain antibody fragment
Authors:Hartmann, S.R, Hafenstein, S.L, Charnesky, A.J.
Deposit date:2022-04-27
Release date:2023-10-04
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Cryo EM structures map a post vaccination polyclonal antibody response to canine parvovirus.
Commun Biol, 6, 2023
7UTU
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BU of 7utu by Molmil
CPV Total-Fab Polyclonal B Site Fab (1 of 2)
Descriptor: Capsid protein 2, Heavy chain antibody fragment, Light chain antibody fragment
Authors:Hartmann, S.R, Hafenstein, S.L, Charnesky, A.J.
Deposit date:2022-04-27
Release date:2023-10-04
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Cryo EM structures map a post vaccination polyclonal antibody response to canine parvovirus.
Commun Biol, 6, 2023
7RYJ
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BU of 7ryj by Molmil
Cryo EM analysis reveals inherent flexibility of authentic murine papillomavirus capsids
Descriptor: Major capsid protein L1
Authors:Hartmann, S.R, Hafenstein, S.
Deposit date:2021-08-25
Release date:2021-11-10
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Cryo EM Analysis Reveals Inherent Flexibility of Authentic Murine Papillomavirus Capsids.
Viruses, 13, 2021
6PER
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BU of 6per by Molmil
Crystal Structure of Ligand-Free iSeroSnFR
Descriptor: 1,2-ETHANEDIOL, iSeroSnFR, a soluble, ...
Authors:Hartanto, S, Tian, L, Fisher, A.J.
Deposit date:2019-06-20
Release date:2020-06-24
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Directed Evolution of a Selective and Sensitive Serotonin Sensor via Machine Learning.
Cell, 183, 2020
4QM8
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BU of 4qm8 by Molmil
Crystal Structure of a Putative Cysteine Dioxygnase From Bacillus subtilis: A Alternative Modeling of 3EQE
Descriptor: CYSTEINE, Cysteine dioxygenase, FE (III) ION
Authors:Hartman, S.H, Driggers, C.M, Karplus, P.A.
Deposit date:2014-06-15
Release date:2014-11-26
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (2.82 Å)
Cite:Structures of Arg- and Gln-type bacterial cysteine dioxygenase homologs.
Protein Sci., 24, 2015
4QM9
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BU of 4qm9 by Molmil
Crystal Structure of a Putative Cysteine Dioxygenase From Bacillus subtilis with Cys-bound
Descriptor: CYSTEINE, Cysteine dioxygenase, FE (III) ION
Authors:Hartman, S.H, Driggers, C.M, Karplus, P.A.
Deposit date:2014-06-15
Release date:2014-11-19
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structures of Arg- and Gln-type bacterial cysteine dioxygenase homologs.
Protein Sci., 24, 2015
4QMA
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BU of 4qma by Molmil
Crystal Structure of a Putative Cysteine Dioxygnase From Ralstonia eutropha: An Alternative Modeling of 2GM6 from JCSG Target 361076
Descriptor: 1,2-ETHANEDIOL, Cysteine dioxygenase type I, FE (III) ION, ...
Authors:Hartman, S.H, Driggers, C.M, Karplus, P.A, Joint Center for Structural Genomics (JCSG)
Deposit date:2014-06-15
Release date:2014-11-26
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structures of Arg- and Gln-type bacterial cysteine dioxygenase homologs.
Protein Sci., 24, 2015
7AJN
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BU of 7ajn by Molmil
Crystal Structure of the first bromodomain of BRD4 in complex with a BzD ligand
Descriptor: 1,2-ETHANEDIOL, Bromodomain-containing protein 4, ~{N}-(1-adamantylmethyl)-2-[(7~{R},9~{S})-7-(4-chlorophenyl)-4,5,13-trimethyl-3-thia-1,8,11,12-tetrazatricyclo[8.3.0.0^{2,6}]trideca-2(6),4,10,12-tetraen-9-yl]ethanamide
Authors:Picaud, S, Hassel-Hart, S, Tobias, K, Spencer, J, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Filippakopoulos, P.
Deposit date:2020-09-29
Release date:2020-12-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Crystal Structure of the first bromodomain of BRD4 in complex with a BzD ligand
To Be Published
8BW3
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BU of 8bw3 by Molmil
PanDDA analysis -- Crystal Structure of PHIP in complex with Z198194396 synthetic derivative
Descriptor: (2S)-N-(cyclopropylmethyl)-2-methyl-4-(1-methyl-1H-pyrrole-2-carbonyl)piperazine-1-carboxamide, PH-interacting protein
Authors:Grosjean, H, Aimon, A, Hassell-Hart, S, Bradshaw, W.J, Krojer, T, Talon, R, Douangamath, A, Koekemoer, L, Biggin, P.C, Spencer, J, von Delft, F.
Deposit date:2022-12-06
Release date:2022-12-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:PanDDA analysis -- Crystal Structure of PHIP in complex with Z198194396 synthetic derivative
To Be Published
6SE4
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BU of 6se4 by Molmil
Crystal Structure of the first bromodomain of human BRD4 in complex with (+)-JD1, an Organometallic BET Bromodomain Inhibitor
Descriptor: (+)-JD1, 1,2-ETHANEDIOL, Bromodomain-containing protein 4, ...
Authors:Krojer, T, Hassell-Hart, S, Picaud, S, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Filippakopoulos, P, Spencer, J, von Delft, F, Structural Genomics Consortium (SGC)
Deposit date:2019-07-29
Release date:2019-08-14
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:Crystal Structure of the first bromodomain of human BRD4 in complex with (+)-JD1, an Organometallic BET Bromodomain Inhibitor
To Be Published
9FFH
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BU of 9ffh by Molmil
Native capsid of Rhodobacter microvirus Ebor computed with I4 symmetry
Descriptor: Major capsid protein
Authors:Bardy, P, MacDonald, C.I.W, Jenkins, H.T, Chechik, M, Hart, S.J, Turkenburg, J.P, Blaza, J.N, Fogg, P.C.M, Antson, A.A.
Deposit date:2024-05-23
Release date:2024-06-12
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:A stargate mechanism of Microviridae genome delivery unveiled by cryogenic electron tomography.
Biorxiv, 2024
9FFG
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BU of 9ffg by Molmil
Empty capsid of Rhodobacter microvirus Ebor computed with I4 symmetry
Descriptor: Major capsid protein
Authors:Bardy, P, MacDonald, C.I.W, Jenkins, H.T, Byrom, L, Chechik, M, Hart, S.J, Turkenburg, J.P, Blaza, J.N, Fogg, P.C.M, Antson, A.A.
Deposit date:2024-05-23
Release date:2024-06-12
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:A stargate mechanism of Microviridae genome delivery unveiled by cryogenic electron tomography.
Biorxiv, 2024
8BW4
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BU of 8bw4 by Molmil
PanDDA analysis -- Crystal Structure of PHIP in complex with Z198194396 synthetic derivative
Descriptor: (2R)-4-(3-fluoranylthiophen-2-yl)carbonyl-N-(4-methoxyphenyl)-2-methyl-piperazine-1-carboxamide, PH-interacting protein
Authors:Grosjean, H, Aimon, A, Hassell-Hart, S, Bradshaw, W.J, Krojer, T, Talon, R, Douangamath, A, Koekemoer, L, Biggin, P.C, Spencer, J, von Delft, F.
Deposit date:2022-12-06
Release date:2022-12-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:PanDDA analysis -- Crystal Structure of PHIP in complex with Z198194396 synthetic derivative
To Be Published
8BW2
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BU of 8bw2 by Molmil
PanDDA analysis -- Crystal Structure of PHIP in complex with Z198194396 synthetic derivative
Descriptor: (2R)-N-(2-methoxyethyl)-2-methyl-4-thiophen-2-ylcarbonyl-piperazine-1-carboxamide, PH-interacting protein
Authors:Grosjean, H, Aimon, A, Hassell-Hart, S, Bradshaw, W.J, Krojer, T, Talon, R, Douangamath, A, Koekemoer, L, Biggin, P.C, Spencer, J, von Delft, F.
Deposit date:2022-12-06
Release date:2022-12-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:PanDDA analysis -- Crystal Structure of PHIP in complex with Z198194396 synthetic derivative
To Be Published
5S8R
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BU of 5s8r by Molmil
PanDDA analysis group deposition -- Crystal Structure of PHIP in complex with Z198194396 synthetic derivative
Descriptor: N-butyl-4-(furan-2-carbonyl)piperazine-1-carboxamide, PH-interacting protein
Authors:Grosjean, H, Aimon, A, Hassel-Hart , S, Krojer, T, Talon, R, Douangamath, A, Koekemoer, L, Biggin, P.C, Spencer, J, von Delft, F.
Deposit date:2021-01-22
Release date:2021-02-17
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:Crystal Structures of the second bromodomain of Pleckstrin homology domain interacting protein (PHIP) in space group C2 soaked with crude reaction mixtures
To Be Published
5S8S
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BU of 5s8s by Molmil
PanDDA analysis group deposition -- Crystal Structure of PHIP in complex with Z198194396 synthetic derivative
Descriptor: N-(2-fluoro-4-methoxyphenyl)-4-(furan-2-carbonyl)piperazine-1-carboxamide, PH-interacting protein
Authors:Grosjean, H, Aimon, A, Hassel-Hart , S, Krojer, T, Talon, R, Douangamath, A, Koekemoer, L, Biggin, P.C, Spencer, J, von Delft, F.
Deposit date:2021-01-22
Release date:2021-02-17
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:Crystal Structures of the second bromodomain of Pleckstrin homology domain interacting protein (PHIP) in space group C2 soaked with crude reaction mixtures
To Be Published
5S8V
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BU of 5s8v by Molmil
PanDDA analysis group deposition -- Crystal Structure of PHIP in complex with Z198194396 synthetic derivative
Descriptor: 4-(furan-2-carbonyl)-N-(propan-2-yl)piperazine-1-carboxamide, PH-interacting protein
Authors:Grosjean, H, Aimon, A, Hassel-Hart , S, Krojer, T, Talon, R, Douangamath, A, Koekemoer, L, Biggin, P.C, Spencer, J, von Delft, F.
Deposit date:2021-01-22
Release date:2021-02-17
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.18 Å)
Cite:Crystal Structures of the second bromodomain of Pleckstrin homology domain interacting protein (PHIP) in space group C2 soaked with crude reaction mixtures
To Be Published

226707

数据于2024-10-30公开中

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