PDB Search results for query - Protein Data Bank Japan

PDB: 72 results

CYCLODEXTRIN GLUCANOTRANSFERASE
Descriptor:	CALCIUM ION, CYCLODEXTRIN GLUCANOTRANSFERASE
Authors:	Harata, K, Haga, K, Nakamura, A, Aoyagi, M, Yamane, K.
Deposit date:	1996-07-08
Release date:	1997-01-11
Last modified:	2024-10-16
Method:	X-RAY DIFFRACTION (1.8 Å)
Cite:	X-ray structure of cyclodextrin glucanotransferase from alkalophilic Bacillus sp. 1011. Comparison of two independent molecules at 1.8 A resolution. Acta Crystallogr.,Sect.D, 52, 1996

1JEF

TURKEY LYSOZYME COMPLEX WITH (GLCNAC)3
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, LYSOZYME, SULFATE ION
Authors:	Harata, K, Muraki, M.
Deposit date:	1997-04-23
Release date:	1997-10-15
Last modified:	2024-10-16
Method:	X-RAY DIFFRACTION (1.77 Å)
Cite:	X-ray structure of turkey-egg lysozyme complex with tri-N-acetylchitotriose. Lack of binding ability at subsite A. Acta Crystallogr.,Sect.D, 53, 1997

1WGT

X-RAY STRUCTURE OF WHEAT GERM AGGLUTININ ISOLECTIN 3
Descriptor:	WHEAT GERM LECTIN
Authors:	Harata, K, Nagahora, H, Jigami, Y.
Deposit date:	1995-04-17
Release date:	1995-07-10
Last modified:	2024-10-23
Method:	X-RAY DIFFRACTION (1.9 Å)
Cite:	X-ray structure of wheat germ agglutinin isolectin 3. Acta Crystallogr.,Sect.D, 51, 1995

2Z12

Structure of the transformed monoclinic lysozyme by controlled dehydration
Descriptor:	CHLORIDE ION, Lysozyme C, SODIUM ION
Authors:	Harata, K, Akiba, T.
Deposit date:	2007-05-07
Release date:	2008-03-18
Last modified:	2024-10-30
Method:	X-RAY DIFFRACTION (1.15 Å)
Cite:	Effect of a sodium ion on the dehydration-induced phase transition of monoclinic lysozyme crystals. Acta Crystallogr.,Sect.D, 63, 2007

2Z18

Phase transition of monoclinic lysozyme crystal soaked in a 10% NaCl solution
Descriptor:	CHLORIDE ION, Lysozyme C, NITROGEN MOLECULE, ...
Authors:	Harata, K, Akiba, T.
Deposit date:	2007-05-08
Release date:	2008-03-18
Last modified:	2024-11-20
Method:	X-RAY DIFFRACTION (1.15 Å)
Cite:	Effect of a sodium ion on the dehydration-induced phase transition of monoclinic lysozyme crystals. Acta Crystallogr.,Sect.D, 63, 2007

2Z19

Phase transition of monoclinic lysozyme crystal soaked in a saturated NaCl solution
Descriptor:	CHLORIDE ION, Lysozyme C, SODIUM ION
Authors:	Harata, K, Akiba, T.
Deposit date:	2007-05-08
Release date:	2008-03-18
Last modified:	2024-10-30
Method:	X-RAY DIFFRACTION (1.15 Å)
Cite:	Effect of a sodium ion on the dehydration-induced phase transition of monoclinic lysozyme crystals. Acta Crystallogr.,Sect.D, 63, 2007

1EHD

CRYSTAL STRUCTURE OF URTICA DIOICA AGGLUTININ ISOLECTIN VI
Descriptor:	AGGLUTININ ISOLECTIN VI
Authors:	Harata, K, Muraki, M.
Deposit date:	2000-02-20
Release date:	2000-04-05
Last modified:	2024-11-06
Method:	X-RAY DIFFRACTION (1.5 Å)
Cite:	Crystal structures of Urtica dioica agglutinin and its complex with tri-N-acetylchitotriose. J.Mol.Biol., 297, 2000

133L

ROLE OF ARG 115 IN THE CATALYTIC ACTION OF HUMAN LYSOZYME. X-RAY STRUCTURE OF HIS 115 AND GLU 115 MUTANTS
Descriptor:	HUMAN LYSOZYME
Authors:	Harata, K, Muraki, M, Jigami, Y.
Deposit date:	1993-06-01
Release date:	1993-10-31
Last modified:	2024-10-30
Method:	X-RAY DIFFRACTION (1.77 Å)
Cite:	Role of Arg115 in the catalytic action of human lysozyme. X-ray structure of His115 and Glu115 mutants. J.Mol.Biol., 233, 1993

134L

ROLE OF ARG 115 IN THE CATALYTIC ACTION OF HUMAN LYSOZYME. X-RAY STRUCTURE OF HIS 115 AND GLU 115 MUTANTS
Descriptor:	HUMAN LYSOZYME
Authors:	Harata, K, Muraki, M, Jigami, Y.
Deposit date:	1993-06-01
Release date:	1993-10-31
Last modified:	2024-10-30
Method:	X-RAY DIFFRACTION (1.77 Å)
Cite:	Role of Arg115 in the catalytic action of human lysozyme. X-ray structure of His115 and Glu115 mutants. J.Mol.Biol., 233, 1993

135L

X-RAY STRUCTURE OF MONOCLINIC TURKEY EGG LYSOZYME AT 1.3 ANGSTROMS RESOLUTION
Descriptor:	TURKEY EGG WHITE LYSOZYME
Authors:	Harata, K.
Deposit date:	1993-06-10
Release date:	1993-10-31
Last modified:	2024-10-30
Method:	X-RAY DIFFRACTION (1.3 Å)
Cite:	X-ray structure of monoclinic turkey egg lysozyme at 1.3 A resolution. Acta Crystallogr.,Sect.D, 49, 1993

1B9O

HUMAN ALPHA-LACTALBUMIN, LOW TEMPERATURE FORM
Descriptor:	CALCIUM ION, PROTEIN (ALPHA-LACTALBUMIN)
Authors:	Harata, K, Abe, Y, Muraki, M.
Deposit date:	1999-02-14
Release date:	1999-03-31
Last modified:	2024-10-30
Method:	X-RAY DIFFRACTION (1.15 Å)
Cite:	Crystallographic evaluation of internal motion of human alpha-lactalbumin refined by full-matrix least-squares method. J.Mol.Biol., 287, 1999

1EHH

CRYSTAL STRUCTURE OF URTICA DIOICA AGGLUTININ ISOLECTIN VI COMPLEX WITH TRI-N-ACETYLCHITOTRIOSE
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, AGGLUTININ ISOLECTIN VI
Authors:	Harata, K, Muraki, M.
Deposit date:	2000-02-21
Release date:	2000-04-05
Last modified:	2024-10-16
Method:	X-RAY DIFFRACTION (1.9 Å)
Cite:	Crystal structures of Urtica dioica agglutinin and its complex with tri-N-acetylchitotriose. J.Mol.Biol., 297, 2000

1LJN

Crystal Structure of Turkey Egg Lysozyme Complex with Di-N-acetylchitobiose at 1.19A Resolution
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, SULFATE ION, lysozyme C
Authors:	Harata, K, Kanai, R.
Deposit date:	2002-04-22
Release date:	2002-06-05
Last modified:	2024-10-23
Method:	X-RAY DIFFRACTION (1.19 Å)
Cite:	Crystallographic dissection of the thermal motion of protein-sugar complex. Proteins, 48, 2002

1LAA

X-RAY STRUCTURE OF GLU 53 HUMAN LYSOZYME
Descriptor:	HUMAN LYSOZYME
Authors:	Harata, K, Muraki, M, Jigami, Y.
Deposit date:	1992-06-24
Release date:	1993-01-15
Last modified:	2024-11-20
Method:	X-RAY DIFFRACTION (1.77 Å)
Cite:	X-ray structure of Glu 53 human lysozyme. Protein Sci., 1, 1992

1LZY

X-RAY STRUCTURE OF TURKEY EGG LYSOZYME COMPLEX WITH DI-N-ACETYLCHITOBIOSE. RECOGNITION AND BINDING OF ALPHA-ANOMERIC FORM
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose, TURKEY EGG WHITE LYSOZYME
Authors:	Harata, K.
Deposit date:	1995-01-09
Release date:	1995-02-27
Last modified:	2024-10-23
Method:	X-RAY DIFFRACTION (1.55 Å)
Cite:	X-ray structure of monoclinic turkey egg lysozyme at 1.3 A resolution. Acta Crystallogr.,Sect.D, 49, 1993

1IQB

Crystal Structure of Urtica dioica Agglutinin Isolectin I
Descriptor:	AGGLUTININ ISOLECTIN I, ZINC ION
Authors:	Harata, K, Schubert, W.D, Muraki, M.
Deposit date:	2001-07-15
Release date:	2001-11-07
Last modified:	2024-11-13
Method:	X-RAY DIFFRACTION (1.9 Å)
Cite:	Structure of Urtica dioica agglutinin isolectin I: dimer formation mediated by two zinc ions bound at the sugar-binding site. Acta Crystallogr.,Sect.D, 57, 2001

2DFC

Xylanase II from Tricoderma reesei at 293K
Descriptor:	Endo-1,4-beta-xylanase 2, IODIDE ION
Authors:	Harata, K, Akiba, T.
Deposit date:	2006-02-28
Release date:	2006-07-11
Last modified:	2024-10-23
Method:	X-RAY DIFFRACTION (1.19 Å)
Cite:	Structure of an orthorhombic form of xylanase II from Trichoderma reesei and analysis of thermal displacement. ACTA CRYSTALLOGR.,SECT.D, 62, 2006

1LYS

X-RAY STRUCTURE OF A MONOCLINIC FORM OF HEN EGG-WHITE LYSOZYME CRYSTALLIZED AT 313K. COMPARISON OF TWO INDEPENDENT MOLECULES
Descriptor:	HEN EGG WHITE LYSOZYME
Authors:	Harata, K.
Deposit date:	1993-12-03
Release date:	1994-04-30
Last modified:	2024-11-20
Method:	X-RAY DIFFRACTION (1.72 Å)
Cite:	X-ray structure of a monoclinic form of hen egg-white lysozyme crystallized at 313 K. Comparison of two independent molecules. Acta Crystallogr.,Sect.D, 50, 1994

2DFB

Xylanase II from Tricoderma reesei at 100K
Descriptor:	Endo-1,4-beta-xylanase 2, IODIDE ION, SULFATE ION
Authors:	Harata, K, Akiba, T.
Deposit date:	2006-02-28
Release date:	2006-07-11
Last modified:	2024-10-09
Method:	X-RAY DIFFRACTION (1.11 Å)
Cite:	Structure of an orthorhombic form of xylanase II from Trichoderma reesei and analysis of thermal displacement. ACTA CRYSTALLOGR.,SECT.D, 62, 2006

2D4I

Monoclinic hen egg-white lysozyme crystallized at pH4.5 form heavy water solution
Descriptor:	Lysozyme C, NITRATE ION, SODIUM ION
Authors:	Harata, K, Akiba, T.
Deposit date:	2005-10-20
Release date:	2006-07-11
Last modified:	2024-10-30
Method:	X-RAY DIFFRACTION (1.16 Å)
Cite:	Structural phase transition of monoclinic crystals of hen egg-white lysozyme ACTA CRYSTALLOGR.,SECT.D, 62, 2006

2D4J

Transformed monoclinic crystal of hen egg-white lysozyme from a heavy water solution
Descriptor:	Lysozyme C, NITRATE ION
Authors:	Harata, K, Akiba, T.
Deposit date:	2005-10-20
Release date:	2006-07-11
Last modified:	2024-11-13
Method:	X-RAY DIFFRACTION (1.16 Å)
Cite:	Structural phase transition of monoclinic crystals of hen egg-white lysozyme ACTA CRYSTALLOGR.,SECT.D, 62, 2006

2D4K

Monoclinic hen egg-white lysozyme crystallized at 313K
Descriptor:	CHLORIDE ION, Lysozyme C, SODIUM ION
Authors:	Harata, K, Akiba, T.
Deposit date:	2005-10-20
Release date:	2006-07-11
Last modified:	2024-10-16
Method:	X-RAY DIFFRACTION (1.15 Å)
Cite:	Structural phase transition of monoclinic crystals of hen egg-white lysozyme ACTA CRYSTALLOGR.,SECT.D, 62, 2006

1JSE

FULL-MATRIX LEAST-SQUARES REFINEMENT OF TURKEY LYSOZYME
Descriptor:	LYSOZYME, N-PROPANOL
Authors:	Harata, K, Abe, Y, Muraki, M.
Deposit date:	1998-01-05
Release date:	1998-04-29
Last modified:	2024-10-30
Method:	X-RAY DIFFRACTION (1.12 Å)
Cite:	Full-matrix least-squares refinement of lysozymes and analysis of anisotropic thermal motion. Proteins, 30, 1998

1JSF

FULL-MATRIX LEAST-SQUARES REFINEMENT OF HUMAN LYSOZYME
Descriptor:	LYSOZYME, NITRATE ION
Authors:	Harata, K, Abe, Y, Muraki, M.
Deposit date:	1998-01-05
Release date:	1998-04-29
Last modified:	2024-11-06
Method:	X-RAY DIFFRACTION (1.15 Å)
Cite:	Full-matrix least-squares refinement of lysozymes and analysis of anisotropic thermal motion. Proteins, 30, 1998

1TAY

DISSECTION OF THE FUNCTIONAL ROLE OF STRUCTURAL ELEMENTS OF TYROSINE-63 IN THE CATALYTIC ACTION OF HUMAN LYSOZYME
Descriptor:	HUMAN LYSOZYME
Authors:	Harata, K, Muraki, M, Jigami, Y.
Deposit date:	1992-08-06
Release date:	1993-01-15
Last modified:	2024-11-13
Method:	X-RAY DIFFRACTION (1.7 Å)
Cite:	Dissection of the functional role of structural elements of tyrosine-63 in the catalytic action of human lysozyme. Biochemistry, 31, 1992

12 3 >

Total results:	72
Displayed results:	25
Sorted by:	Hit score (from highest)
Deposition authors:	"Harata, K."