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PDB: 319 results

5H03
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Crystal structure of an ADP-ribosylating toxin BECa from C. perfringens
Descriptor: Binary enterotoxin of Clostridium perfringens component a
Authors:Kawahara, K, Yonogi, S, Munetomo, R, Oki, H, Yoshida, T, Ohkubo, T, Kumeda, Y, Matsuda, S, Kodama, T, Iida, T, Nakamura, S.
Deposit date:2016-10-03
Release date:2016-11-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Crystal structure of the ADP-ribosylating component of BEC, the binary enterotoxin of Clostridium perfringens.
Biochem.Biophys.Res.Commun., 480, 2016
1A2B
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HUMAN RHOA COMPLEXED WITH GTP ANALOGUE
Descriptor: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, MAGNESIUM ION, TRANSFORMING PROTEIN RHOA
Authors:Ihara, K, Muraguchi, S, Kato, M, Shimizu, T, Shirakawa, M, Kuroda, S, Kaibuchi, K, Hakoshima, T.
Deposit date:1997-12-26
Release date:1998-06-17
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of human RhoA in a dominantly active form complexed with a GTP analogue.
J.Biol.Chem., 273, 1998
5H04
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Crystal structure of an ADP-ribosylating toxin BECa of a novel binary enterotoxin of C. perfringens with NADH
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Binary enterotoxin of Clostridium perfringens component a
Authors:Kawahara, K, Yonogi, S, Munetomo, R, Oki, H, Yoshida, T, Ohkubo, T, Kumeda, Y, Matsuda, S, Kodama, T, Iida, T, Nakamura, S.
Deposit date:2016-10-03
Release date:2016-11-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.825 Å)
Cite:Crystal structure of the ADP-ribosylating component of BEC, the binary enterotoxin of Clostridium perfringens.
Biochem.Biophys.Res.Commun., 480, 2016
5YGX
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Structure of BACE1 in complex with N-(3-((4R,5R,6S)-2-amino-6-(1,1-difluoroethyl)-5-fluoro-4-methyl-5,6-dihydro-4H-1,3-oxazin-4-yl)-4-fluorophenyl)-5-(fluoromethoxy)pyrazine-2-carboxamide
Descriptor: Beta-secretase 1, DIMETHYL SULFOXIDE, GLYCEROL, ...
Authors:Nakahara, K, Fuchino, K, Komano, K, Asada, N, Tadano, G, Hasegawa, T, Yamamoto, T, Sako, Y, Ogawa, M, Unemura, C, Hosono, M, Sakaguchi, G, Ando, S, Ohnishi, S, Kido, Y, Fukushima, T, Dhuyvetter, D, Borghys, H, Gijsen, H, Yamano, Y, Iso, Y, Kusakabe, K.
Deposit date:2017-09-27
Release date:2018-08-08
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Discovery of Potent and Centrally Active 6-Substituted 5-Fluoro-1,3-dihydro-oxazine beta-Secretase (BACE1) Inhibitors via Active Conformation Stabilization
J. Med. Chem., 61, 2018
1LZY
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X-RAY STRUCTURE OF TURKEY EGG LYSOZYME COMPLEX WITH DI-N-ACETYLCHITOBIOSE. RECOGNITION AND BINDING OF ALPHA-ANOMERIC FORM
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose, TURKEY EGG WHITE LYSOZYME
Authors:Harata, K.
Deposit date:1995-01-09
Release date:1995-02-27
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:X-ray structure of monoclinic turkey egg lysozyme at 1.3 A resolution.
Acta Crystallogr.,Sect.D, 49, 1993
5AX6
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The crystal structure of CofB, the minor pilin subunit of CFA/III from human enterotoxigenic Escherichia coli.
Descriptor: ACETATE ION, CofB
Authors:Kawahara, K, Oki, K, Fukaksua, F, Maruno, T, Kobayashi, Y, Daisuke, M, Taniguchi, T, Honda, T, Iida, T, Nakamura, S, Ohkubo, T.
Deposit date:2015-07-16
Release date:2016-03-09
Last modified:2020-02-26
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Homo-trimeric Structure of the Type IVb Minor Pilin CofB Suggests Mechanism of CFA/III Pilus Assembly in Human Enterotoxigenic Escherichia coli
J.Mol.Biol., 428, 2016
1EHD
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CRYSTAL STRUCTURE OF URTICA DIOICA AGGLUTININ ISOLECTIN VI
Descriptor: AGGLUTININ ISOLECTIN VI
Authors:Harata, K, Muraki, M.
Deposit date:2000-02-20
Release date:2000-04-05
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structures of Urtica dioica agglutinin and its complex with tri-N-acetylchitotriose.
J.Mol.Biol., 297, 2000
1EHH
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CRYSTAL STRUCTURE OF URTICA DIOICA AGGLUTININ ISOLECTIN VI COMPLEX WITH TRI-N-ACETYLCHITOTRIOSE
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, AGGLUTININ ISOLECTIN VI
Authors:Harata, K, Muraki, M.
Deposit date:2000-02-21
Release date:2000-04-05
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structures of Urtica dioica agglutinin and its complex with tri-N-acetylchitotriose.
J.Mol.Biol., 297, 2000
133L
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ROLE OF ARG 115 IN THE CATALYTIC ACTION OF HUMAN LYSOZYME. X-RAY STRUCTURE OF HIS 115 AND GLU 115 MUTANTS
Descriptor: HUMAN LYSOZYME
Authors:Harata, K, Muraki, M, Jigami, Y.
Deposit date:1993-06-01
Release date:1993-10-31
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Role of Arg115 in the catalytic action of human lysozyme. X-ray structure of His115 and Glu115 mutants.
J.Mol.Biol., 233, 1993
134L
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ROLE OF ARG 115 IN THE CATALYTIC ACTION OF HUMAN LYSOZYME. X-RAY STRUCTURE OF HIS 115 AND GLU 115 MUTANTS
Descriptor: HUMAN LYSOZYME
Authors:Harata, K, Muraki, M, Jigami, Y.
Deposit date:1993-06-01
Release date:1993-10-31
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Role of Arg115 in the catalytic action of human lysozyme. X-ray structure of His115 and Glu115 mutants.
J.Mol.Biol., 233, 1993
135L
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X-RAY STRUCTURE OF MONOCLINIC TURKEY EGG LYSOZYME AT 1.3 ANGSTROMS RESOLUTION
Descriptor: TURKEY EGG WHITE LYSOZYME
Authors:Harata, K.
Deposit date:1993-06-10
Release date:1993-10-31
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:X-ray structure of monoclinic turkey egg lysozyme at 1.3 A resolution.
Acta Crystallogr.,Sect.D, 49, 1993
1B9O
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HUMAN ALPHA-LACTALBUMIN, LOW TEMPERATURE FORM
Descriptor: CALCIUM ION, PROTEIN (ALPHA-LACTALBUMIN)
Authors:Harata, K, Abe, Y, Muraki, M.
Deposit date:1999-02-14
Release date:1999-03-31
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Crystallographic evaluation of internal motion of human alpha-lactalbumin refined by full-matrix least-squares method.
J.Mol.Biol., 287, 1999
1JEF
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TURKEY LYSOZYME COMPLEX WITH (GLCNAC)3
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, LYSOZYME, SULFATE ION
Authors:Harata, K, Muraki, M.
Deposit date:1997-04-23
Release date:1997-10-15
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:X-ray structure of turkey-egg lysozyme complex with tri-N-acetylchitotriose. Lack of binding ability at subsite A.
Acta Crystallogr.,Sect.D, 53, 1997
2DZV
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Structure of mutant tryptophan synthase alpha-subunit (D146A) from a hyperthermophile, Pyrococcus furiosus
Descriptor: Tryptophan synthase alpha chain
Authors:Ogasahara, K, Yamagata, Y, Yutani, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-09-30
Release date:2007-08-28
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structures of mutant tryptophan synthase alpha-subunits from a hyperthermophile, Pyrococcus furiosus
To be Published
2DZT
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Structure of mutant tryptophan synthase alpha-subunit (D110A) from a hyperthermophile, Pyrococcus furiosus
Descriptor: Tryptophan synthase alpha chain
Authors:Ogasahara, K, Yamagata, Y, Yutani, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-09-30
Release date:2007-08-28
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structures of mutant tryptophan synthase alpha-subunits from a hyperthermophile, Pyrococcus furiosus
To be Published
2DZU
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Structure of mutant tryptophan synthase alpha-subunit (D110N) from a hyperthermophile, Pyrococcus furiosus
Descriptor: Tryptophan synthase alpha chain
Authors:Ogasahara, K, Yamagata, Y, Yutani, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-09-30
Release date:2007-08-28
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Structures of mutant tryptophan synthase alpha-subunits from a hyperthermophile, Pyrococcus furiosus
To be Published
2DZS
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Structure of mutant tryptophan synthase alpha-subunit (E103A) from a hyperthermophile, Pyrococcus furiosus
Descriptor: Tryptophan synthase alpha chain
Authors:Ogasahara, K, Yamagata, Y, Yutani, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-09-30
Release date:2007-08-28
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structures of mutant tryptophan synthase alpha-subunits from a hyperthermophile, Pyrococcus furiosus
To be Published
2DZW
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Structure of mutant tryptophan synthase alpha-subunit (E244A) from a hyperthermophile, Pyrococcus furiosus
Descriptor: Tryptophan synthase alpha chain
Authors:Ogasahara, K, Yamagata, Y, Yutani, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-09-30
Release date:2007-08-28
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structures of mutant tryptophan synthase alpha-subunits from a hyperthermophile, Pyrococcus furiosus
To be Published
2E09
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Structure of mutant tryptophan synthase alpha-subunit (E74A) from a hyperthermophile, Pyrococcus furiosus
Descriptor: Tryptophan synthase alpha chain
Authors:Ogasahara, K, Yamagata, Y, Yutani, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-10-02
Release date:2007-08-28
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structures of mutant tryptophan synthase alpha-subunits from a hyperthermophile, Pyrococcus furiosus
To be Published
2DZP
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Structure of mutant tryptophan synthase alpha-subunit (D17N) from a hyperthermophile, Pyrococcus furiosus
Descriptor: Tryptophan synthase alpha chain
Authors:Ogasahara, K, Yamagata, Y, Yutani, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-09-30
Release date:2007-08-28
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structures of mutant tryptophan synthase alpha-subunits from a hyperthermophile, Pyrococcus furiosus
To be Published
2DZX
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Structure of mutant tryptophan synthase alpha-subunit (E131-132A) from a hyperthermophile, Pyrococcus furiosus
Descriptor: Tryptophan synthase alpha chain
Authors:Ogasahara, K, Yamagata, Y, Yutani, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-09-30
Release date:2007-08-28
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structures of mutant tryptophan synthase alpha-subunits from a hyperthermophile, Pyrococcus furiosus
To be Published
2DFC
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Xylanase II from Tricoderma reesei at 293K
Descriptor: Endo-1,4-beta-xylanase 2, IODIDE ION
Authors:Harata, K, Akiba, T.
Deposit date:2006-02-28
Release date:2006-07-11
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.19 Å)
Cite:Structure of an orthorhombic form of xylanase II from Trichoderma reesei and analysis of thermal displacement.
ACTA CRYSTALLOGR.,SECT.D, 62, 2006
2DFB
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Xylanase II from Tricoderma reesei at 100K
Descriptor: Endo-1,4-beta-xylanase 2, IODIDE ION, SULFATE ION
Authors:Harata, K, Akiba, T.
Deposit date:2006-02-28
Release date:2006-07-11
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.11 Å)
Cite:Structure of an orthorhombic form of xylanase II from Trichoderma reesei and analysis of thermal displacement.
ACTA CRYSTALLOGR.,SECT.D, 62, 2006
1LJN
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Crystal Structure of Turkey Egg Lysozyme Complex with Di-N-acetylchitobiose at 1.19A Resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, SULFATE ION, lysozyme C
Authors:Harata, K, Kanai, R.
Deposit date:2002-04-22
Release date:2002-06-05
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.19 Å)
Cite:Crystallographic dissection of the thermal motion of protein-sugar complex.
Proteins, 48, 2002
1IQB
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Crystal Structure of Urtica dioica Agglutinin Isolectin I
Descriptor: AGGLUTININ ISOLECTIN I, ZINC ION
Authors:Harata, K, Schubert, W.D, Muraki, M.
Deposit date:2001-07-15
Release date:2001-11-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of Urtica dioica agglutinin isolectin I: dimer formation mediated by two zinc ions bound at the sugar-binding site.
Acta Crystallogr.,Sect.D, 57, 2001

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