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PDB: 50 件

8CBY
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Crystal Structure of Anti-cortisol Fab in Complex with Cortisol
分子名称: (11alpha,14beta)-11,17,21-trihydroxypregn-4-ene-3,20-dione, anti-cortisol (17) Fab (heavy chain), anti-cortisol (17) Fab (light chain)
著者Eronen, V, Rouvinen, J, Hakulinen, N.
登録日2023-01-26
公開日2023-05-10
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.27 Å)
主引用文献Structural insight to elucidate the binding specificity of the anti-cortisol Fab fragment with glucocorticoids.
J.Struct.Biol., 215, 2023
8CBX
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Crystal Structure of Anti-Cortisol Fab fragment
分子名称: TETRAETHYLENE GLYCOL, anti-cortisol (17) Fab (heavy chain), anti-cortisol (17) Fab (light chain)
著者Eronen, V, Rouvinen, J, Hakulinen, N.
登録日2023-01-26
公開日2023-05-10
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural insight to elucidate the binding specificity of the anti-cortisol Fab fragment with glucocorticoids.
J.Struct.Biol., 215, 2023
8CBZ
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Crystal Structure of Anti-cortisol Fab in Complex with Corticosterone
分子名称: CORTICOSTERONE, anti-cortisol (17) Fab (heavy chain), anti-cortisol (17) Fab (light chain)
著者Eronen, V, Rouvinen, J, Hakulinen, N.
登録日2023-01-26
公開日2023-05-10
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Structural insight to elucidate the binding specificity of the anti-cortisol Fab fragment with glucocorticoids.
J.Struct.Biol., 215, 2023
6GSG
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Crystal structure of Aspergillus oryzae catechol oxidase complexed with resorcinol
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, COPPER (II) ION, Catechol oxidase, ...
著者Penttinen, L, Hakulinen, N, Rouvinen, J.
登録日2018-06-14
公開日2018-09-19
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.192 Å)
主引用文献Unraveling Substrate Specificity and Catalytic Promiscuity of Aspergillus oryzae Catechol Oxidase.
Chembiochem, 19, 2018
1XNK
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Beta-1,4-xylanase from Chaetomium thermophilum complexed with methyl thioxylopentoside
分子名称: 4-thio-beta-D-xylopyranose-(1-4)-4-thio-beta-D-xylopyranose-(1-4)-methyl 4-thio-alpha-D-xylopyranoside, SULFATE ION, endoxylanase 11A
著者Hakanpaa, J, Hakulinen, N, Rouvinen, J.
登録日2004-10-05
公開日2005-05-10
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Determination of thioxylo-oligosaccharide binding to family 11 xylanases using electrospray ionization Fourier transform ion cyclotron resonance mass spectrometry and X-ray crystallography
FEBS J., 272, 2005
5HWM
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BU of 5hwm by Molmil
Crystal structure of keto-deoxy-D-galactarate dehydratase complexed with 2-oxoadipic acid
分子名称: 2-OXOADIPIC ACID, FORMIC ACID, Probable 5-dehydro-4-deoxyglucarate dehydratase
著者Taberman, H, Parkkinen, T, Hakulinen, N, Rouvinen, J.
登録日2016-01-29
公開日2016-03-23
実験手法X-RAY DIFFRACTION (2.097 Å)
主引用文献Structure and function of a decarboxylating Agrobacterium tumefaciens keto-deoxy-d-galactarate dehydratase.
Biochemistry, 53, 2014
5HWJ
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Crystal structure of keto-deoxy-D-galactarate dehydratase
分子名称: FORMIC ACID, GLYCEROL, Probable 5-dehydro-4-deoxyglucarate dehydratase
著者Taberman, H, Parkkinen, T, Hakulinen, N, Rouvinen, J.
登録日2016-01-29
公開日2016-03-23
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.648 Å)
主引用文献Structure and function of a decarboxylating Agrobacterium tumefaciens keto-deoxy-d-galactarate dehydratase.
Biochemistry, 53, 2014
6KVE
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Crystal structure of a GH28 endo-polygalacturonase from Talaromyces leycettanus JCM 12802
分子名称: Endo-polygalacturonase
著者Tu, T, Hakulinen, N, Yao, B.
登録日2019-09-04
公開日2020-09-09
最終更新日2022-03-23
実験手法X-RAY DIFFRACTION (1.32 Å)
主引用文献Structural Insights into the Mechanisms Underlying the Kinetic Stability of GH28 Endo-Polygalacturonase.
J.Agric.Food Chem., 69, 2021
6Z9I
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Escherichia coli D-2-deoxyribose-5-phosphate aldolase - N21K mutant complex with reaction products
分子名称: 1,2-ETHANEDIOL, Deoxyribose-phosphate aldolase, GLYCERALDEHYDE-3-PHOSPHATE, ...
著者Paakkonen, J, Hakulinen, N, Rouvinen, J.
登録日2020-06-04
公開日2020-11-18
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Substrate specificity of 2-deoxy-D-ribose 5-phosphate aldolase (DERA) assessed by different protein engineering and machine learning methods.
Appl.Microbiol.Biotechnol., 104, 2020
6Z9H
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Escherichia coli D-2-deoxyribose-5-phosphate aldolase - C47V/G204A/S239D mutant
分子名称: 1,2-ETHANEDIOL, Deoxyribose-phosphate aldolase, FORMIC ACID, ...
著者Paakkonen, J, Hakulinen, N, Rouvinen, J.
登録日2020-06-04
公開日2020-11-18
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Substrate specificity of 2-deoxy-D-ribose 5-phosphate aldolase (DERA) assessed by different protein engineering and machine learning methods.
Appl.Microbiol.Biotechnol., 104, 2020
6Z9J
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Escherichia coli D-2-deoxyribose-5-phosphate aldolase - N21K mutant
分子名称: Deoxyribose-phosphate aldolase, MAGNESIUM ION
著者Paakkonen, J, Hakulinen, N, Rouvinen, J.
登録日2020-06-04
公開日2020-11-18
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Substrate specificity of 2-deoxy-D-ribose 5-phosphate aldolase (DERA) assessed by different protein engineering and machine learning methods.
Appl.Microbiol.Biotechnol., 104, 2020
5J83
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Crystal structure of L-arabinonate dehydratase in apo-form
分子名称: Dihydroxyacid dehydratase/phosphogluconate dehydratase
著者Rahman, M.M, Rouvinen, J, Hakulinen, N.
登録日2016-04-07
公開日2017-06-21
最終更新日2018-01-10
実験手法X-RAY DIFFRACTION (3.001 Å)
主引用文献The Crystal Structure of a Bacterial l-Arabinonate Dehydratase Contains a [2Fe-2S] Cluster.
ACS Chem. Biol., 12, 2017
5J84
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Crystal structure of L-arabinonate dehydratase in holo-form
分子名称: Dihydroxy-acid dehydratase, FE2/S2 (INORGANIC) CLUSTER, MAGNESIUM ION
著者Rahman, M.M, Rouvinen, J, Hakulinen, N.
登録日2016-04-07
公開日2017-06-21
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The Crystal Structure of a Bacterial l-Arabinonate Dehydratase Contains a [2Fe-2S] Cluster.
ACS Chem. Biol., 12, 2017
7PLB
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Caulobacter crescentus xylonolactonase with D-xylose
分子名称: FE (II) ION, SULFATE ION, Smp-30/Cgr1 family protein, ...
著者Paakkonen, J, Hakulinen, N, Rouvinen, J.
登録日2021-08-30
公開日2021-11-24
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Three-dimensional structure of xylonolactonase from Caulobacter crescentus: A mononuclear iron enzyme of the 6-bladed beta-propeller hydrolase family.
Protein Sci., 31, 2022
7PLC
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Caulobacter crescentus xylonolactonase with D-xylose, P21 space group
分子名称: FE (II) ION, SULFATE ION, Smp-30/Cgr1 family protein, ...
著者Paakkonen, J, Hakulinen, N, Rouvinen, J.
登録日2021-08-30
公開日2021-11-24
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Three-dimensional structure of xylonolactonase from Caulobacter crescentus: A mononuclear iron enzyme of the 6-bladed beta-propeller hydrolase family.
Protein Sci., 31, 2022
7PLD
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BU of 7pld by Molmil
Caulobacter crescentus xylonolactonase with (R)-4-hydroxy-2-pyrrolidone
分子名称: (R)-4-hydroxy-2-pyrrolidone, FE (II) ION, Smp-30/Cgr1 family protein
著者Paakkonen, J, Hakulinen, N, Rouvinen, J.
登録日2021-08-30
公開日2021-11-24
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Three-dimensional structure of xylonolactonase from Caulobacter crescentus: A mononuclear iron enzyme of the 6-bladed beta-propeller hydrolase family.
Protein Sci., 31, 2022
5J85
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Ser480Ala mutant of L-arabinonate dehydratase
分子名称: Dihydroxyacid dehydratase/phosphogluconate dehydratase, FE2/S2 (INORGANIC) CLUSTER, MAGNESIUM ION
著者Rahman, M.M, Rouvinen, J, Hakulinen, N.
登録日2016-04-07
公開日2017-06-21
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献The Crystal Structure of a Bacterial l-Arabinonate Dehydratase Contains a [2Fe-2S] Cluster.
ACS Chem. Biol., 12, 2017
3QPK
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Probing oxygen channels in Melanocarpus albomyces laccase
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ...
著者Kallio, J.P, Rouvinen, J, Hakulinen, N.
登録日2011-02-14
公開日2011-05-11
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Probing the Dioxygen Route in Melanocarpus albomyces Laccase with Pressurized Xenon Gas.
Biochemistry, 50, 2011
3TTS
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BU of 3tts by Molmil
Crystal structure of beta-galactosidase from Bacillus circulans sp. alkalophilus
分子名称: Beta-galactosidase, ZINC ION
著者Maksimainen, M, Hakulinen, N, Rouvinen, J.
登録日2011-09-15
公開日2012-03-21
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.401 Å)
主引用文献Structural analysis, enzymatic characterization, and catalytic mechanisms of beta-galactosidase from Bacillus circulans sp. alkalophilus.
Febs J., 279, 2012
3TTY
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BU of 3tty by Molmil
Crystal structure of beta-galactosidase from Bacillus circulans sp. alkalophilus in complex with galactose
分子名称: Beta-galactosidase, ZINC ION, alpha-D-galactopyranose
著者Maksimainen, M, Hakulinen, N, Rouvinen, J.
登録日2011-09-15
公開日2012-03-21
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structural analysis, enzymatic characterization, and catalytic mechanisms of beta-galactosidase from Bacillus circulans sp. alkalophilus.
Febs J., 279, 2012
3PPS
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BU of 3pps by Molmil
Crystal structure of an ascomycete fungal laccase from Thielavia arenaria
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, COPPER (II) ION, ...
著者Kallio, J.P, Rouvinen, J, Hakulinen, N.
登録日2010-11-25
公開日2011-05-18
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of an ascomycete fungal laccase from Thielavia arenaria--common structural features of asco-laccases.
Febs J., 278, 2011
3FU9
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Melanocarpus albomyces laccase crystal soaked (20 min) with 2,6-dimethoxyphenol
分子名称: 2,6-dimethoxybenzene-1,4-diol, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Kallio, J.P, Hakulinen, N, Rouvinen, J.
登録日2009-01-14
公開日2009-09-22
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure-Function Studies of a Melanocarpus albomyces Laccase Suggest a Pathway for Oxidation of Phenolic Compounds.
J.Mol.Biol., 392, 2009
3FU7
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Melanocarpus albomyces laccase crystal soaked (4 sec) with 2,6-dimethoxyphenol
分子名称: 2,6-dimethoxycyclohexa-2,5-diene-1,4-dione, 2,6-dimethoxyphenol, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Kallio, J.P, Hakulinen, N, Rouvinen, J.
登録日2009-01-14
公開日2009-09-22
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献Structure Function Studies of a Melanocarpus albomyces Laccase Suggest a Pathway for Oxidation of Phenolic Compounds.
J.Mol.Biol., 392, 2009
3FU8
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Melanocarpus albomyces laccase crystal soaked (10 sec) with 2,6-dimethoxyphenol
分子名称: 2,6-dimethoxyphenol, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Kallio, J.P, Hakulinen, N, Rouvinen, J.
登録日2009-01-14
公開日2009-09-22
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure-Function Studies of a Melanocarpus albomyces Laccase Suggest a Pathway for Oxidation of Phenolic Compounds.
J.Mol.Biol., 392, 2009
5OYN
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Crystal structure of D-xylonate dehydratase in holo-form
分子名称: Dehydratase, IlvD/Edd family, FE2/S2 (INORGANIC) CLUSTER, ...
著者Rahman, M.M, Rouvinen, J, Hakulinen, N.
登録日2017-09-11
公開日2018-01-24
最終更新日2018-04-18
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献The crystal structure of D-xylonate dehydratase reveals functional features of enzymes from the Ilv/ED dehydratase family.
Sci Rep, 8, 2018
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