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PDB: 52 件

2NSU
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BU of 2nsu by Molmil
Crystal structure of the ectodomain of human transferrin receptor fitted into a cryo-EM reconstruction of canine parvovirus and feline transferrin receptor complex
分子名称: Transferrin receptor protein 1
著者Hafenstein, S, Kostyuchenko, V.A, Rossmann, M.G.
登録日2006-11-06
公開日2007-03-27
最終更新日2023-12-27
実験手法ELECTRON MICROSCOPY (27 Å)
主引用文献Asymmetric binding of transferrin receptor to parvovirus capsids.
Proc.Natl.Acad.Sci.Usa, 104, 2007
2QZH
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BU of 2qzh by Molmil
SCR2/3 of DAF from the NMR structure 1nwv fitted into a cryoEM reconstruction of CVB3-RD complexed with DAF
分子名称: Complement decay-accelerating factor
著者Hafenstein, S, Bowman, V.D, Chipman, P.R, Bator Kelly, C.M, Lin, F, Medof, M.E, Rossmann, M.G.
登録日2007-08-16
公開日2007-10-30
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (14 Å)
主引用文献Interaction of decay-accelerating factor with coxsackievirus b3.
J.Virol., 81, 2007
2QZF
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BU of 2qzf by Molmil
SCR1 of DAF from 1ojv fitted into cryoEM density
分子名称: Complement decay-accelerating factor
著者Hafenstein, S, Bowman, V.D, Chipman, P.R, Bator Kelly, C.M, Lin, F, Medof, M.E, Rossmann, M.G.
登録日2007-08-16
公開日2007-10-30
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (14 Å)
主引用文献Interaction of decay-accelerating factor with coxsackievirus b3.
J.Virol., 81, 2007
2QZD
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BU of 2qzd by Molmil
Fitted structure of SCR4 of DAF into cryoEM density
分子名称: Complement decay-accelerating factor
著者Hafenstein, S, Bowman, V.D, Chipman, P.R, Bator Kelly, C.M, Lin, F, Medof, M.E, Rossmann, M.G.
登録日2007-08-16
公開日2007-10-30
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (14 Å)
主引用文献Interaction of decay-accelerating factor with coxsackievirus b3.
J.Virol., 81, 2007
3GK8
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BU of 3gk8 by Molmil
X-ray crystal structure of the Fab from MAb 14, mouse antibody against Canine Parvovirus
分子名称: Fab 14 Heavy Chain, Fab 14 Light Chain
著者Hafenstein, S, Bowman, V, Sun, T, Nelson, C, Palermo, L, Chipman, P, Battisti, A, Parrish, C.
登録日2009-03-10
公開日2009-06-16
最終更新日2017-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural comparison of different antibodies interacting with parvovirus capsids.
J.Virol., 83, 2009
3IY0
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BU of 3iy0 by Molmil
Variable domains of the x-ray structure of Fab 14 fitted into the cryoEM reconstruction of the virus-Fab 14 complex
分子名称: Fab 14, heavy domain, light domain
著者Hafenstein, S, Bowman, V.D, Sun, T, Nelson, C.D, Palermo, L.M, Chipman, P.R, Battisti, A.J, Parrish, C.R, Rossmann, M.G.
登録日2009-04-07
公開日2009-05-12
最終更新日2011-07-13
実験手法ELECTRON MICROSCOPY (12.5 Å)
主引用文献Structural comparison of different antibodies interacting with parvovirus capsids
J.Virol., 83, 2009
3IY7
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BU of 3iy7 by Molmil
Variable domains of the computer generated model (WAM) of Fab F fitted into the cryoEM reconstruction of the virus-Fab F complex
分子名称: fragment from neutralizing antibody F (heavy chain), fragment from neutralizing antibody F (light chain)
著者Hafenstein, S, Bowman, V.D, Sun, T, Nelson, C.D, Palermo, L.M, Chipman, P.R, Battisti, A.J, Parrish, C.R, Rossmann, M.G.
登録日2009-04-09
公開日2009-05-12
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (14 Å)
主引用文献Structural comparison of different antibodies interacting with parvovirus capsids
J.Virol., 83, 2009
3IY2
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BU of 3iy2 by Molmil
Variable domains of the computer generated model (WAM) of Fab 6 fitted into the cryoEM reconstruction of the virus-Fab 6 complex
分子名称: Antibody 6, heavy chain, light chain
著者Hafenstein, S, Bowman, V.D, Sun, T, Nelson, C.D, Palermo, L.M, Chipman, P.R, Battisti, A.J, Parrish, C.R, Rossmann, M.G.
登録日2009-04-09
公開日2009-05-12
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (18 Å)
主引用文献Structural comparison of different antibodies interacting with parvovirus capsids
J.Virol., 83, 2009
3IY4
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BU of 3iy4 by Molmil
Variable domains of the computer generated model (WAM) of Fab 15 fitted into the cryoEM reconstruction of the virus-Fab 15 complex
分子名称: fragment of neutralizing antibody 15 (heavy chain), fragment of neutralizing antibody 15 (light chain)
著者Hafenstein, S, Bowman, V.D, Sun, T, Nelson, C.D, Palermo, L.M, Chipman, P.R, Battisti, A.J, Parrish, C.R, Rossmann, M.G.
登録日2009-04-09
公開日2009-05-12
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (11.7 Å)
主引用文献Structural comparison of different antibodies interacting with parvovirus capsids
J.Virol., 83, 2009
3IY6
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BU of 3iy6 by Molmil
Variable domains of the computer generated model (WAM) of Fab E fitted into the cryoEM reconstruction of the virus-Fab E complex
分子名称: fragment from neutralizing antibody E (heavy chain), fragment from neutralizing antibody E (light chain)
著者Hafenstein, S, Bowman, V.D, Sun, T, Nelson, C.D, Palermo, L.M, Chipman, P.R, Battisti, A.J, Parrish, C.R, Rossmann, M.G.
登録日2009-04-09
公開日2009-05-12
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (12 Å)
主引用文献Structural comparison of different antibodies interacting with parvovirus capsids
J.Virol., 83, 2009
3IY1
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Variable domains of the WAM of Fab B fitted into the cryoEM reconstruction of the virus-Fab B complex
分子名称: Fab B, heavy chain, light chain
著者Hafenstein, S, Bowman, V.D, Sun, T, Nelson, C.D, Palermo, L.M, Battisti, A.J, Parrish, C.R, Rossmann, M.G.
登録日2009-04-09
公開日2009-05-12
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (18 Å)
主引用文献Structural comparison of different antibodies interacting with parvovirus capsids
J.Virol., 83, 2009
3IY5
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BU of 3iy5 by Molmil
Variable domains of the mouse Fab (1AIF) fitted into the cryoEM reconstruction of the virus-Fab 16 complex
分子名称: antibody fragment IGG2A (heavy chain), antibody fragment IGG2A (light chain)
著者Hafenstein, S, Bowman, V.D, Sun, T, Nelson, C.D, Palermo, L.M, Chipman, P.R, Battisti, A.J, Parrish, C.R, Rossmann, M.G.
登録日2009-04-09
公開日2009-05-12
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (18 Å)
主引用文献Structural comparison of different antibodies interacting with parvovirus capsids
J.Virol., 83, 2009
3IY3
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BU of 3iy3 by Molmil
Variable domains of the computer generated model (WAM) of Fab 8 fitted into the cryoEM reconstruction of the virus-Fab 8 complex
分子名称: antibody fragment from neutralizing antibody 8 (heavy chain), antibody fragment from neutralizing antibody 8 (light chain)
著者Hafenstein, S, Bowman, V.D, Sun, T, Nelson, C.D, Palermo, L.M, Chipman, P.R, Battisti, A.J, Parrish, C.R, Rossmann, M.G.
登録日2009-04-09
公開日2009-05-12
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (11.1 Å)
主引用文献Structural comparison of different antibodies interacting with parvovirus capsids
J.Virol., 83, 2009
3JCX
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BU of 3jcx by Molmil
Canine Parvovirus complexed with Fab E
分子名称: Capsid protein 2, Fab E heavy chain, Fab E light chain
著者Organtini, L.J, Iketani, S, Huang, K, Ashley, R.E, Makhov, A.M, Conway, J.F, Parrish, C.R, Hafenstein, S.
登録日2016-03-21
公開日2016-07-20
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Near-Atomic Resolution Structure of a Highly Neutralizing Fab Bound to Canine Parvovirus.
J.Virol., 90, 2016
6OAS
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BU of 6oas by Molmil
Structure of canine parvovirus in complex with transferrin receptor type-1
分子名称: Capsid protein VP1
著者Lee, H, Hafenstein, S.
登録日2019-03-18
公開日2019-09-18
最終更新日2019-12-04
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Transferrin receptor binds virus capsid with dynamic motion.
Proc.Natl.Acad.Sci.USA, 116, 2019
1RB8
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BU of 1rb8 by Molmil
The phiX174 DNA binding protein J in two different capsid environments.
分子名称: 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE, Capsid protein, DNA (5'-D(P*CP*AP*AP*A)-3'), ...
著者Bernal, R.A, Hafenstein, S, Esmeralda, R, Fane, B.A, Rossmann, M.G.
登録日2003-11-03
公開日2004-04-13
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献The phiX174 Protein J Mediates DNA Packaging and Viral Attachment to Host Cells.
J.Mol.Biol., 337, 2004
3J91
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BU of 3j91 by Molmil
Cryo-electron microscopy of Enterovirus 71 (EV71) procapsid in complex with Fab fragments of neutralizing antibody 22A12
分子名称: VP0, VP1, VP3
著者Shingler, K.L, Cifuente, J.O, Ashley, R.E, Makhov, A.M, Conway, J.F, Hafenstein, S.
登録日2014-11-24
公開日2014-12-10
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (8.8 Å)
主引用文献The enterovirus 71 procapsid binds neutralizing antibodies and rescues virus infection in vitro.
J.Virol., 89, 2015
3JD7
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BU of 3jd7 by Molmil
The novel asymmetric entry intermediate of a picornavirus captured with nanodiscs
分子名称: Capsid protein VP1, Capsid protein VP2, Capsid protein VP3, ...
著者Lee, H, Shingler, K.L, Organtini, L.J, Ashley, R.E, Makhov, A.M, Conway, J.F, Hafenstein, S.
登録日2016-04-29
公開日2016-09-14
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献The novel asymmetric entry intermediate of a picornavirus captured with nanodiscs.
Sci Adv, 2, 2016
7RYJ
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BU of 7ryj by Molmil
Cryo EM analysis reveals inherent flexibility of authentic murine papillomavirus capsids
分子名称: Major capsid protein L1
著者Hartmann, S.R, Hafenstein, S.
登録日2021-08-25
公開日2021-11-10
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Cryo EM Analysis Reveals Inherent Flexibility of Authentic Murine Papillomavirus Capsids.
Viruses, 13, 2021
3URO
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BU of 3uro by Molmil
Poliovirus receptor CD155 D1D2
分子名称: Poliovirus receptor
著者Zhang, P, Mueller, S, Morais, M.C, Bator, C.M, Bowman, V.D, Hafenstein, S, Wimmer, E, Rossmann, M.G.
登録日2011-11-22
公開日2011-12-07
実験手法X-RAY DIFFRACTION (3.5005 Å)
主引用文献Crystal structure of CD155 and electron microscopic studies of its complexes with polioviruses.
Proc.Natl.Acad.Sci.USA, 105, 2008
6UH1
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BU of 6uh1 by Molmil
Structure of the EVA71 strain 11316 capsid
分子名称: SPHINGOSINE, VP1, VP2, ...
著者Lee, H, Hafenstein, S.
登録日2019-09-26
公開日2019-12-18
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.04 Å)
主引用文献Scaffold Simplification Strategy Leads to a Novel Generation of Dual Human Immunodeficiency Virus and Enterovirus-A71 Entry Inhibitors.
J.Med.Chem., 63, 2020
6UH7
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EV-A71 strain 11316 complexed with MADAL compound 30
分子名称: SPHINGOSINE, VP1, VP2, ...
著者Lee, H, Hafenstein, S.
登録日2019-09-26
公開日2019-12-18
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (2.87 Å)
主引用文献Scaffold Simplification Strategy Leads to a Novel Generation of Dual Human Immunodeficiency Virus and Enterovirus-A71 Entry Inhibitors.
J.Med.Chem., 63, 2020
6UH6
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BU of 6uh6 by Molmil
EV-A71 strain 11316 complexed with MADAL compound 22
分子名称: SPHINGOSINE, VP1, VP2, ...
著者Lee, H, Hafenstein, S.
登録日2019-09-26
公開日2019-12-18
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (2.98 Å)
主引用文献Scaffold Simplification Strategy Leads to a Novel Generation of Dual Human Immunodeficiency Virus and Enterovirus-A71 Entry Inhibitors.
J.Med.Chem., 63, 2020
5KEP
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BU of 5kep by Molmil
High resolution cryo-EM maps of Human Papillomavirus 16 reveal L2 location and heparin-induced conformational changes
分子名称: Major capsid protein L1
著者Guan, J, Bywaters, S.M, Brendle, S.A, Ashley, R.E, Makhov, A.M, Conway, J.F, Christensen, N.D, Hafenstein, S.
登録日2016-06-10
公開日2017-01-25
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Cryoelectron Microscopy Maps of Human Papillomavirus 16 Reveal L2 Densities and Heparin Binding Site.
Structure, 25, 2017
5KEQ
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BU of 5keq by Molmil
High resolution cryo-EM maps of Human papillomavirus 16 reveal L2 location and heparin-induced conformational changes
分子名称: Major capsid protein L1
著者Guan, J, Bywaters, S.M, Brendle, S.A, Ashley, R.E, Makhov, A.M, Conway, J.F, Christensen, N.D, Hafenstein, S.
登録日2016-06-10
公開日2017-01-25
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Cryoelectron Microscopy Maps of Human Papillomavirus 16 Reveal L2 Densities and Heparin Binding Site.
Structure, 25, 2017

 

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