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PDB: 56 results

4MJN
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Structure of the c ring of the CF1FO ATP synthases.
Descriptor: ATP synthase subunit c, chloroplastic
Authors:Balakrishna, A.M, Gruber, G.
Deposit date:2013-09-04
Release date:2014-03-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (6 Å)
Cite:Crystallographic structure of the turbine C-ring from spinach chloroplast F-ATP synthase.
Biosci. Rep., 34, 2014
3B2Q
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Intermediate position of ATP on its trail to the binding pocket inside the subunit B mutant R416W of the energy converter A1Ao ATP synthase
Descriptor: 4-(2-AMINOETHYL)BENZENESULFONYL FLUORIDE, ADENOSINE-5'-TRIPHOSPHATE, CITRIC ACID, ...
Authors:Kumar, A, Manimekalai, M.S.S, Balakrishna, A.M, Hunke, C, Gruber, G.
Deposit date:2007-10-19
Release date:2008-09-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Spectroscopic and crystallographic studies of the mutant R416W give insight into the nucleotide binding traits of subunit B of the A1Ao ATP synthase
Proteins, 75, 2009
5X09
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BU of 5x09 by Molmil
Crystal structure of subunit A mutant P235A/S238C of the A-ATP synthase from pyrococcus horikoshii OT3
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETIC ACID, ...
Authors:Dhirendra, S, Gruber, G.
Deposit date:2017-01-20
Release date:2017-11-29
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystallographic and enzymatic insights into the mechanisms of Mg-ADP inhibition in the A1 complex of the A1AO ATP synthase
J. Struct. Biol., 201, 2018
8HCR
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Cryo-EM structure of the Mycobacterium tuberculosis cytochrome bcc:aa3 supercomplex and a novel inhibitor targeting subunit cytochrome cI
Descriptor: CYTOCHROME AA3 SUBUNIT CtaC, CYTOCHROME AA3 SUBUNIT CtaJ, Cytochrome bc1 complex Rieske iron-sulfur subunit, ...
Authors:Mathiyazakan, V, Gruber, G.
Deposit date:2022-11-02
Release date:2023-05-03
Last modified:2023-09-13
Method:ELECTRON MICROSCOPY
Cite:Cryo-Electron Microscopy Structure of the Mycobacterium tuberculosi s Cytochrome bcc : aa 3 Supercomplex and a Novel Inhibitor Targeting Subunit Cytochrome c I.
Antimicrob.Agents Chemother., 67, 2023
1D8S
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ESCHERICHIA COLI F1 ATPASE
Descriptor: F1 ATPASE (ALPHA SUBUNIT), F1 ATPASE (BETA SUBUNIT), F1 ATPASE (GAMMA SUBUNIT)
Authors:Hausrath, A.C, Gruber, G, Matthews, B.W, Capaldi, R.A.
Deposit date:1999-10-25
Release date:1999-12-03
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (4.4 Å)
Cite:Structural features of the gamma subunit of the Escherichia coli F(1) ATPase revealed by a 4.4-A resolution map obtained by x-ray crystallography.
Proc.Natl.Acad.Sci.USA, 96, 1999
6LXG
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NMR solution structure of regulatory ACT domain of the Mycobacterium tuberculosis Rel protein
Descriptor: GTP pyrophosphokinase
Authors:Shin, J, Singal, B, Manimekalai, M.S.S, Gruber, G.
Deposit date:2020-02-11
Release date:2020-11-04
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Atomic structure of, and valine binding to the regulatory ACT domain of the Mycobacterium tuberculosis Rel protein.
Febs J., 288, 2021
3HGF
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Expression, purification, spectroscopical and crystallographical studies of segments of the nucleotide binding domain of the reticulocyte binding protein Py235 of Plasmodium yoelii
Descriptor: Rhoptry protein fragment
Authors:Gruber, A, Manimekalai, M.S.S, Balakrishna, A.M, Hunke, C, Jeyakanthan, J, Preiser, P.R, Gruber, G.
Deposit date:2009-05-13
Release date:2010-02-23
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (4 Å)
Cite:Structural determination of functional units of the nucleotide binding domain (NBD94) of the reticulocyte binding protein Py235 of Plasmodium yoelii
Plos One, 5, 2010
2RKW
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Intermediate position of ATP on its trail to the binding pocket inside the subunit B mutant R416W of the energy converter A1Ao ATP synthase
Descriptor: V-type ATP synthase beta chain
Authors:Kumar, A, Manimekalai, M.S.S, Balakrishna, A.M, Hunke, C, Gruber, G.
Deposit date:2007-10-18
Release date:2008-09-09
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:Spectroscopic and crystallographic studies of the mutant R416W give insight into the nucleotide binding traits of subunit B of the A1Ao ATP synthase
Proteins, 75, 2009
3TGW
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Crystal structure of subunit B mutant H156A of the A1AO ATP synthase
Descriptor: 2-(2-METHOXYETHOXY)ETHANOL, 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, 4-(2-AMINOETHYL)BENZENESULFONYL FLUORIDE, ...
Authors:Tadwal, V.S, Manimekalai, M.S.S, Jeyakanthan, J, Gruber, G.
Deposit date:2011-08-18
Release date:2012-09-05
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structure of subunit A mutants H156A, N157A and N157T of the A1AO ATP synthase
To be Published
3SSA
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Crystal structure of subunit B mutant N157T of the A1AO ATP synthase
Descriptor: 4-(2-AMINOETHYL)BENZENESULFONYL FLUORIDE, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Sundararaman, L, Manimekalai, M.S.S, Jeyakanthan, J, Gruber, G.
Deposit date:2011-07-08
Release date:2012-09-05
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of subunit A mutants H156A, N157A and N157T of the A1AO ATP synthase
To be Published
3TIV
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Crystal structure of subunit B mutant N157A of the A1AO ATP synthase
Descriptor: 2-(2-METHOXYETHOXY)ETHANOL, 4-(2-AMINOETHYL)BENZENESULFONYL FLUORIDE, CHLORIDE ION, ...
Authors:Tadwal, V.S, Manimekalai, M.S.S, Jeyakanthan, J, Gruber, G.
Deposit date:2011-08-22
Release date:2012-09-05
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structure of subunit A mutants H156A, N157A and N157T of the A1AO ATP synthase
To be Published
6IL7
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Structure of Enterococcus faecalis (V583) alkylhydroperoxide reductase subunit F (AhpF) C503A mutant
Descriptor: SULFATE ION, Thioredoxin reductase/glutathione-related protein
Authors:Toh, Y.K, Shin, J, Balakrishna, A.M, Eisenhaber, F, Eisenhaber, B, Gruber, G.
Deposit date:2018-10-17
Release date:2019-05-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Effect of the additional cysteine 503 of vancomycin-resistant Enterococcus faecalis (V583) alkylhydroperoxide reductase subunit F (AhpF) and the mechanism of AhpF and subunit C assembling.
Free Radic. Biol. Med., 138, 2019
3M4Y
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Structural characterization of the subunit A mutant P235A of the A-ATP synthase
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETIC ACID, ...
Authors:Manimekalai, M.S, Balakrishna, A.M, Kumar, A, Priya, R, Biukovic, G, Jeyakanthan, J, Gruber, G.
Deposit date:2010-03-12
Release date:2011-01-26
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:The critical roles of residues P235 and F236 of subunit A of the motor protein A-ATP synthase in P-loop formation and nucleotide binding.
J.Mol.Biol., 401, 2010
2VBC
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BU of 2vbc by Molmil
Crystal structure of the NS3 protease-helicase from Dengue virus
Descriptor: DENGUE 4 NS3 FULL-LENGTH PROTEIN, PARTIAL POLYPROTEIN FOR NS2A AND NS2B, TYPE 4 PROTOTYPE DV4 H241
Authors:Luo, D.H, Xu, T, Hunke, C, Gruber, G, Vasudevan, S.G, Lescar, J.
Deposit date:2007-09-10
Release date:2007-10-30
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Crystal Structure of the Ns3 Protease-Helicase from Dengue Virus.
J.Virol., 82, 2008
2KK7
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BU of 2kk7 by Molmil
NMR solution structure of the N terminal domain of subunit E (E1-52) of A1AO ATP synthase from Methanocaldococcus jannaschii
Descriptor: V-type ATP synthase subunit E
Authors:Gayen, S, Balakrishna, A, Gruber, G.
Deposit date:2009-06-16
Release date:2009-07-14
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:NMR solution structure of the N-terminal domain of subunit E (E1-52) of A1AO ATP synthase from Methanocaldococcus jannaschii
J.Bioenerg.Biomembr., 41, 2009
2K88
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Association of subunit d (Vma6p) and E (Vma4p) with G (Vma10p) and the NMR solution structure of subunit G (G1-59) of the Saccharomyces cerevisiae V1VO ATPase
Descriptor: Vacuolar proton pump subunit G
Authors:Sankaranarayanan, N, Gayen, S, Thaker, Y, Subramanian, V, Manimekalai, M.S.S, Gruber, G.
Deposit date:2008-09-04
Release date:2009-08-11
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Assembly of subunit d (Vma6p) and G (Vma10p) and the NMR solution structure of subunit G (G(1-59)) of the Saccharomyces cerevisiae V(1)V(O) ATPase.
Biochim.Biophys.Acta, 1787, 2009
3QIA
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BU of 3qia by Molmil
Crystal structure of P-loop G237A mutant of subunit A of the A1AO ATP synthase
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETIC ACID, ...
Authors:Ragunathan, P, Manimekalai, M.S.S, Jeyakanthan, J, Gruber, G.
Deposit date:2011-01-26
Release date:2011-10-05
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Conserved glycine residues in the P-loop of ATP synthases form a doorframe for nucleotide entrance.
J.Mol.Biol., 413, 2011
4RND
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BU of 4rnd by Molmil
Crystal Structure of the subunit DF-assembly of the eukaryotic V-ATPase.
Descriptor: GLYCEROL, V-type proton ATPase subunit D, V-type proton ATPase subunit F
Authors:Balakrishna, A.M, Basak, S, Gruber, G.
Deposit date:2014-10-24
Release date:2014-12-10
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.18 Å)
Cite:Crystal Structure of Subunits D and F in Complex Gives Insight into Energy Transmission of the Eukaryotic V-ATPase from Saccharomyces cerevisiae.
J.Biol.Chem., 290, 2015
7BZ6
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Mycobacterium bovis AhpC
Descriptor: Alkyl hydroperoxide reductase C peptide
Authors:Chong, S.M.S, Neelagandan, K, Gruber, G.
Deposit date:2020-04-27
Release date:2021-03-10
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.302 Å)
Cite:Residues of helix alpha2 are critical for catalytic efficiency of mycobacterial alkylhydroperoxide reductase subunit C.
Febs Lett., 594, 2020
3QG1
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BU of 3qg1 by Molmil
Crystal structure of P-loop G239A mutant of subunit A of the A1AO ATP synthase
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETIC ACID, V-type ATP synthase alpha chain
Authors:Ragunathan, P, Manimekalai, M.S.S, Kumar, A, Jeyakanthan, J, Gruber, G.
Deposit date:2011-01-24
Release date:2011-10-05
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Conserved glycine residues in the P-loop of ATP synthases form a doorframe for nucleotide entrance.
J.Mol.Biol., 413, 2011
3QJY
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Crystal structure of P-loop G234A mutant of subunit A of the A1AO ATP synthase
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETIC ACID, ...
Authors:Ragunathan, P, Manimekalai, M.S.S, Jeyakanthan, J, Gruber, G.
Deposit date:2011-01-31
Release date:2011-10-05
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Conserved glycine residues in the P-loop of ATP synthases form a doorframe for nucleotide entrance.
J.Mol.Biol., 413, 2011
3P20
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Crystal structure of vanadate bound subunit A of the A1AO ATP synthase
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETIC ACID, ...
Authors:Manimekalai, M.S.S, Kumar, A, Jeyakanthan, J, Gruber, G.
Deposit date:2010-10-01
Release date:2011-03-30
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:The transition-like state and Pi entrance into the catalytic a subunit of the biological engine A-ATP synthase.
J.Mol.Biol., 408, 2011
5H29
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Crystal Structure of the NTD_N/C domain of Alkylhydroperoxide Reductase AhpF from Enterococcus Faecalis (V583)
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, PROLINE, SULFATE ION, ...
Authors:Balakrishna, A.M, Kwang, T.Y, Gruber, G.
Deposit date:2016-10-14
Release date:2017-11-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Novel insights into the vancomycin-resistant Enterococcus faecalis (V583) alkylhydroperoxide reductase subunit F
Biochim. Biophys. Acta, 1861, 2017
5ID2
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Asymmetry in the active site of Mycobacterium tuberculosis AhpE upon exposure to Mycothiol
Descriptor: ACETATE ION, GLYCEROL, Putative peroxiredoxin Rv2238c
Authors:Kumar, A, Balakrishna, A.M, Gruber, G.
Deposit date:2016-02-23
Release date:2016-08-03
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Redox chemistry of Mycobacterium tuberculosis alkylhydroperoxide reductase E (AhpE): Structural and mechanistic insight into a mycoredoxin-1 independent reductive pathway of AhpE via mycothiol
Free Radic. Biol. Med., 97, 2016
4QL9
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Crystal structure of C-terminus truncated Alkylhydroperoxide Reductase subunit C (AhpC1-182) from E. coli
Descriptor: Alkylhydroperoxide Reductase subunit C
Authors:Nartey, W, Kamariah, N, Gruber, G.
Deposit date:2014-06-11
Release date:2014-09-24
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Key roles of the Escherichia coli AhpC C-terminus in assembly and catalysis of alkylhydroperoxide reductase, an enzyme essential for the alleviation of oxidative stress.
Biochim.Biophys.Acta, 1837, 2014

 

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數據於2024-10-30公開中

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