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PDB: 56 件

8HCR
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Cryo-EM structure of the Mycobacterium tuberculosis cytochrome bcc:aa3 supercomplex and a novel inhibitor targeting subunit cytochrome cI
分子名称: CYTOCHROME AA3 SUBUNIT CtaC, CYTOCHROME AA3 SUBUNIT CtaJ, Cytochrome bc1 complex Rieske iron-sulfur subunit, ...
著者Mathiyazakan, V, Gruber, G.
登録日2022-11-02
公開日2023-05-03
最終更新日2023-09-13
実験手法ELECTRON MICROSCOPY
主引用文献Cryo-Electron Microscopy Structure of the Mycobacterium tuberculosi s Cytochrome bcc : aa 3 Supercomplex and a Novel Inhibitor Targeting Subunit Cytochrome c I.
Antimicrob.Agents Chemother., 67, 2023
4RND
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Crystal Structure of the subunit DF-assembly of the eukaryotic V-ATPase.
分子名称: GLYCEROL, V-type proton ATPase subunit D, V-type proton ATPase subunit F
著者Balakrishna, A.M, Basak, S, Gruber, G.
登録日2014-10-24
公開日2014-12-10
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.18 Å)
主引用文献Crystal Structure of Subunits D and F in Complex Gives Insight into Energy Transmission of the Eukaryotic V-ATPase from Saccharomyces cerevisiae.
J.Biol.Chem., 290, 2015
6LXG
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NMR solution structure of regulatory ACT domain of the Mycobacterium tuberculosis Rel protein
分子名称: GTP pyrophosphokinase
著者Shin, J, Singal, B, Manimekalai, M.S.S, Gruber, G.
登録日2020-02-11
公開日2020-11-04
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Atomic structure of, and valine binding to the regulatory ACT domain of the Mycobacterium tuberculosis Rel protein.
Febs J., 288, 2021
1D8S
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BU of 1d8s by Molmil
ESCHERICHIA COLI F1 ATPASE
分子名称: F1 ATPASE (ALPHA SUBUNIT), F1 ATPASE (BETA SUBUNIT), F1 ATPASE (GAMMA SUBUNIT)
著者Hausrath, A.C, Gruber, G, Matthews, B.W, Capaldi, R.A.
登録日1999-10-25
公開日1999-12-03
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (4.4 Å)
主引用文献Structural features of the gamma subunit of the Escherichia coli F(1) ATPase revealed by a 4.4-A resolution map obtained by x-ray crystallography.
Proc.Natl.Acad.Sci.USA, 96, 1999
3SSA
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Crystal structure of subunit B mutant N157T of the A1AO ATP synthase
分子名称: 4-(2-AMINOETHYL)BENZENESULFONYL FLUORIDE, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
著者Sundararaman, L, Manimekalai, M.S.S, Jeyakanthan, J, Gruber, G.
登録日2011-07-08
公開日2012-09-05
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure of subunit A mutants H156A, N157A and N157T of the A1AO ATP synthase
To be Published
3TGW
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Crystal structure of subunit B mutant H156A of the A1AO ATP synthase
分子名称: 2-(2-METHOXYETHOXY)ETHANOL, 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, 4-(2-AMINOETHYL)BENZENESULFONYL FLUORIDE, ...
著者Tadwal, V.S, Manimekalai, M.S.S, Jeyakanthan, J, Gruber, G.
登録日2011-08-18
公開日2012-09-05
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structure of subunit A mutants H156A, N157A and N157T of the A1AO ATP synthase
To be Published
3TIV
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BU of 3tiv by Molmil
Crystal structure of subunit B mutant N157A of the A1AO ATP synthase
分子名称: 2-(2-METHOXYETHOXY)ETHANOL, 4-(2-AMINOETHYL)BENZENESULFONYL FLUORIDE, CHLORIDE ION, ...
著者Tadwal, V.S, Manimekalai, M.S.S, Jeyakanthan, J, Gruber, G.
登録日2011-08-22
公開日2012-09-05
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structure of subunit A mutants H156A, N157A and N157T of the A1AO ATP synthase
To be Published
5ID2
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Asymmetry in the active site of Mycobacterium tuberculosis AhpE upon exposure to Mycothiol
分子名称: ACETATE ION, GLYCEROL, Putative peroxiredoxin Rv2238c
著者Kumar, A, Balakrishna, A.M, Gruber, G.
登録日2016-02-23
公開日2016-08-03
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.43 Å)
主引用文献Redox chemistry of Mycobacterium tuberculosis alkylhydroperoxide reductase E (AhpE): Structural and mechanistic insight into a mycoredoxin-1 independent reductive pathway of AhpE via mycothiol
Free Radic. Biol. Med., 97, 2016
2RKW
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Intermediate position of ATP on its trail to the binding pocket inside the subunit B mutant R416W of the energy converter A1Ao ATP synthase
分子名称: V-type ATP synthase beta chain
著者Kumar, A, Manimekalai, M.S.S, Balakrishna, A.M, Hunke, C, Gruber, G.
登録日2007-10-18
公開日2008-09-09
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.81 Å)
主引用文献Spectroscopic and crystallographic studies of the mutant R416W give insight into the nucleotide binding traits of subunit B of the A1Ao ATP synthase
Proteins, 75, 2009
5B8A
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BU of 5b8a by Molmil
Crystal structure of oxidized chimeric EcAhpC1-186-YFSKHN
分子名称: Alkyl hydroperoxide reductase subunit C,Peroxiredoxin-2, GLYCEROL, SULFATE ION
著者Kamariah, N, Sek, M.F, Eisenhaber, B, Eisenhaber, F, Gruber, G.
登録日2016-06-14
公開日2017-02-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Transition steps in peroxide reduction and a molecular switch for peroxide robustness of prokaryotic peroxiredoxins.
Sci Rep, 6, 2016
3M4Y
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BU of 3m4y by Molmil
Structural characterization of the subunit A mutant P235A of the A-ATP synthase
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETIC ACID, ...
著者Manimekalai, M.S, Balakrishna, A.M, Kumar, A, Priya, R, Biukovic, G, Jeyakanthan, J, Gruber, G.
登録日2010-03-12
公開日2011-01-26
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献The critical roles of residues P235 and F236 of subunit A of the motor protein A-ATP synthase in P-loop formation and nucleotide binding.
J.Mol.Biol., 401, 2010
5B8B
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BU of 5b8b by Molmil
Crystal structure of reduced chimeric E.coli AhpC1-186-YFSKHN
分子名称: Alkyl hydroperoxide reductase subunit C,Peroxiredoxin-2, SULFATE ION
著者Kamariah, N, Sek, M.F, Eisenhaber, B, Eisenhaber, F, Gruber, G.
登録日2016-06-14
公開日2017-02-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Transition steps in peroxide reduction and a molecular switch for peroxide robustness of prokaryotic peroxiredoxins.
Sci Rep, 6, 2016
3QG1
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BU of 3qg1 by Molmil
Crystal structure of P-loop G239A mutant of subunit A of the A1AO ATP synthase
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETIC ACID, V-type ATP synthase alpha chain
著者Ragunathan, P, Manimekalai, M.S.S, Kumar, A, Jeyakanthan, J, Gruber, G.
登録日2011-01-24
公開日2011-10-05
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Conserved glycine residues in the P-loop of ATP synthases form a doorframe for nucleotide entrance.
J.Mol.Biol., 413, 2011
3QIA
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BU of 3qia by Molmil
Crystal structure of P-loop G237A mutant of subunit A of the A1AO ATP synthase
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETIC ACID, ...
著者Ragunathan, P, Manimekalai, M.S.S, Jeyakanthan, J, Gruber, G.
登録日2011-01-26
公開日2011-10-05
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Conserved glycine residues in the P-loop of ATP synthases form a doorframe for nucleotide entrance.
J.Mol.Biol., 413, 2011
6IL7
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BU of 6il7 by Molmil
Structure of Enterococcus faecalis (V583) alkylhydroperoxide reductase subunit F (AhpF) C503A mutant
分子名称: SULFATE ION, Thioredoxin reductase/glutathione-related protein
著者Toh, Y.K, Shin, J, Balakrishna, A.M, Eisenhaber, F, Eisenhaber, B, Gruber, G.
登録日2018-10-17
公開日2019-05-22
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Effect of the additional cysteine 503 of vancomycin-resistant Enterococcus faecalis (V583) alkylhydroperoxide reductase subunit F (AhpF) and the mechanism of AhpF and subunit C assembling.
Free Radic. Biol. Med., 138, 2019
3QJY
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BU of 3qjy by Molmil
Crystal structure of P-loop G234A mutant of subunit A of the A1AO ATP synthase
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETIC ACID, ...
著者Ragunathan, P, Manimekalai, M.S.S, Jeyakanthan, J, Gruber, G.
登録日2011-01-31
公開日2011-10-05
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Conserved glycine residues in the P-loop of ATP synthases form a doorframe for nucleotide entrance.
J.Mol.Biol., 413, 2011
3HGF
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Expression, purification, spectroscopical and crystallographical studies of segments of the nucleotide binding domain of the reticulocyte binding protein Py235 of Plasmodium yoelii
分子名称: Rhoptry protein fragment
著者Gruber, A, Manimekalai, M.S.S, Balakrishna, A.M, Hunke, C, Jeyakanthan, J, Preiser, P.R, Gruber, G.
登録日2009-05-13
公開日2010-02-23
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (4 Å)
主引用文献Structural determination of functional units of the nucleotide binding domain (NBD94) of the reticulocyte binding protein Py235 of Plasmodium yoelii
Plos One, 5, 2010
3P20
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Crystal structure of vanadate bound subunit A of the A1AO ATP synthase
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETIC ACID, ...
著者Manimekalai, M.S.S, Kumar, A, Jeyakanthan, J, Gruber, G.
登録日2010-10-01
公開日2011-03-30
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献The transition-like state and Pi entrance into the catalytic a subunit of the biological engine A-ATP synthase.
J.Mol.Biol., 408, 2011
5H29
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Crystal Structure of the NTD_N/C domain of Alkylhydroperoxide Reductase AhpF from Enterococcus Faecalis (V583)
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, PROLINE, SULFATE ION, ...
著者Balakrishna, A.M, Kwang, T.Y, Gruber, G.
登録日2016-10-14
公開日2017-11-22
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Novel insights into the vancomycin-resistant Enterococcus faecalis (V583) alkylhydroperoxide reductase subunit F
Biochim. Biophys. Acta, 1861, 2017
4QL9
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Crystal structure of C-terminus truncated Alkylhydroperoxide Reductase subunit C (AhpC1-182) from E. coli
分子名称: Alkylhydroperoxide Reductase subunit C
著者Nartey, W, Kamariah, N, Gruber, G.
登録日2014-06-11
公開日2014-09-24
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Key roles of the Escherichia coli AhpC C-terminus in assembly and catalysis of alkylhydroperoxide reductase, an enzyme essential for the alleviation of oxidative stress.
Biochim.Biophys.Acta, 1837, 2014
4QL7
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Crystal structure of C-terminus truncated Alkylhydroperoxide Reductase subunit C (AhpC1-172) from E. coli
分子名称: Alkylhydroperoxide Reductase subunit C
著者Kamariah, N, Gruber, G, Eisenhaber, F, Eisenhaber, B.
登録日2014-06-11
公開日2014-09-24
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.75 Å)
主引用文献Key roles of the Escherichia coli AhpC C-terminus in assembly and catalysis of alkylhydroperoxide reductase, an enzyme essential for the alleviation of oxidative stress.
Biochim.Biophys.Acta, 1837, 2014
5YIO
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BU of 5yio by Molmil
NMR solution structure of subunit epsilon of the Mycobacterium tuberculosis F-ATP synthase
分子名称: ATP synthase epsilon chain
著者Shin, J, Ragunathan, P, Sundararaman, L, Nartey, W, Manimekalai, M.S.S, Bogdanovic, N, Gruber, G.
登録日2017-10-06
公開日2018-10-10
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献The NMR solution structure of Mycobacterium tuberculosis F-ATP synthase subunit epsilon provides new insight into energy coupling inside the rotary engine.
FEBS J., 285, 2018
7BZ6
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Mycobacterium bovis AhpC
分子名称: Alkyl hydroperoxide reductase C peptide
著者Chong, S.M.S, Neelagandan, K, Gruber, G.
登録日2020-04-27
公開日2021-03-10
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.302 Å)
主引用文献Residues of helix alpha2 are critical for catalytic efficiency of mycobacterial alkylhydroperoxide reductase subunit C.
Febs Lett., 594, 2020
2VBC
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BU of 2vbc by Molmil
Crystal structure of the NS3 protease-helicase from Dengue virus
分子名称: DENGUE 4 NS3 FULL-LENGTH PROTEIN, PARTIAL POLYPROTEIN FOR NS2A AND NS2B, TYPE 4 PROTOTYPE DV4 H241
著者Luo, D.H, Xu, T, Hunke, C, Gruber, G, Vasudevan, S.G, Lescar, J.
登録日2007-09-10
公開日2007-10-30
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献Crystal Structure of the Ns3 Protease-Helicase from Dengue Virus.
J.Virol., 82, 2008
3MFY
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Structural characterization of the subunit A mutant F236A of the A-ATP synthase from Pyrococcus horikoshii
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETIC ACID, ...
著者Balakrishna, A.M, Kumar, A, Manimekali, M.S.S, Jeyakanthan, J, Gruber, G.
登録日2010-04-05
公開日2010-07-07
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献The critical roles of residues P235 and F236 of subunit A of the motor protein A-ATP synthase in P-loop formation and nucleotide binding.
J.Mol.Biol., 401, 2010

 

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