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PDB: 49 results

5J3W
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BU of 5j3w by Molmil
Crystal structures reveal signaling states of a short blue light photoreceptor protein PpSB1-LOV (dark state)
Descriptor: FLAVIN MONONUCLEOTIDE, Sensory box protein
Authors:Granzin, J, Batra-Safferling, R.
Deposit date:2016-03-31
Release date:2016-06-22
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Signaling States of a Short Blue-Light Photoreceptor Protein PpSB1-LOV Revealed from Crystal Structures and Solution NMR Spectroscopy.
J.Mol.Biol., 428, 2016
7R4S
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BU of 7r4s by Molmil
Crystal structure of PpSB1-LOV-I48T mutant (dark state)
Descriptor: FLAVIN MONONUCLEOTIDE, Sensory box protein
Authors:Granzin, J, Batra-Safferling, R.
Deposit date:2022-02-09
Release date:2022-12-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Residue alterations within a conserved hydrophobic pocket influence light, oxygen, voltage photoreceptor dark recovery.
Photochem Photobiol Sci, 22, 2023
7R56
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Crystal structure of PpSB1-LOV-I48T mutant (light state)
Descriptor: FLAVIN MONONUCLEOTIDE, Sensory box protein
Authors:Granzin, J, Batra-Safferling, R.
Deposit date:2022-02-10
Release date:2022-12-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Residue alterations within a conserved hydrophobic pocket influence light, oxygen, voltage photoreceptor dark recovery.
Photochem Photobiol Sci, 22, 2023
6I8W
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Crystal structure of a membrane phospholipase A, a novel bacterial virulence factor
Descriptor: Alpha/beta fold hydrolase, CARBON DIOXIDE, ISOPROPYL ALCOHOL, ...
Authors:Granzin, J, Batra-Safferling, R.
Deposit date:2018-11-21
Release date:2019-11-27
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural, mechanistic, and physiological insights into phospholipase A-mediated membrane phospholipid degradation in Pseudomonas aeruginosa.
Elife, 11, 2022
4ZRG
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BU of 4zrg by Molmil
Visual arrestin mutant - R175E
Descriptor: CARBON DIOXIDE, S-arrestin
Authors:Granzin, J, Stadler, A, Cousin, A, Schlesinger, R, Batra-Safferling, R.
Deposit date:2015-05-12
Release date:2015-11-11
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural evidence for the role of polar core residue Arg175 in arrestin activation.
Sci Rep, 5, 2015
7ABY
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BU of 7aby by Molmil
Crystal structure of iLOV-Q489K mutant
Descriptor: ACETATE ION, FLAVIN MONONUCLEOTIDE, Phototropin-2
Authors:Granzin, J, Batra-Safferling, R.
Deposit date:2020-09-09
Release date:2021-04-21
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:The molecular basis of spectral tuning in blue- and red-shifted flavin-binding fluorescent proteins.
J.Biol.Chem., 296, 2021
1AYR
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BU of 1ayr by Molmil
ARRESTIN FROM BOVINE ROD OUTER SEGMENTS
Descriptor: ARRESTIN
Authors:Granzin, J, Wilden, U, Choe, H.-W, Labahn, J, Krafft, B, Bueldt, G.
Deposit date:1997-11-10
Release date:1998-11-25
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:X-ray crystal structure of arrestin from bovine rod outer segments.
Nature, 391, 1998
5J4E
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BU of 5j4e by Molmil
Crystal structures reveal signaling states of a short blue light photoreceptor protein PpSB1-LOV (Photoexcited state)
Descriptor: FLAVIN MONONUCLEOTIDE, Sensory box protein
Authors:Granzin, J, Batra-Safferling, R.
Deposit date:2016-04-01
Release date:2016-06-22
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.67 Å)
Cite:Signaling States of a Short Blue-Light Photoreceptor Protein PpSB1-LOV Revealed from Crystal Structures and Solution NMR Spectroscopy.
J.Mol.Biol., 428, 2016
2IF4
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Crystal structure of a multi-domain immunophilin from Arabidopsis thaliana
Descriptor: ATFKBP42
Authors:Granzin, J, Eckhoff, A, Weiergraeber, O.H.
Deposit date:2006-09-20
Release date:2006-10-31
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Crystal Structure of a Multi-domain Immunophilin from Arabidopsis thaliana: A Paradigm for Regulation of Plant ABC Transporters.
J.Mol.Biol., 364, 2006
1RGK
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RNASE T1 MUTANT GLU46GLN BINDS THE INHIBITORS 2'GMP AND 2'AMP AT THE 3' SUBSITE
Descriptor: ADENOSINE-2'-MONOPHOSPHATE, CALCIUM ION, RIBONUCLEASE T1
Authors:Granzin, J, Puras-Lutzke, R, Landt, O, Grunert, H.-P, Heinemann, U, Saenger, W, Hahn, U.
Deposit date:1992-02-19
Release date:1993-01-15
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:RNase T1 mutant Glu46Gln binds the inhibitors 2'GMP and 2'AMP at the 3' subsite.
J.Mol.Biol., 225, 1992
1RGL
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BU of 1rgl by Molmil
RNASE T1 MUTANT GLU46GLN BINDS THE INHIBITORS 2'GMP AND 2'AMP AT THE 3' SUBSITE
Descriptor: CALCIUM ION, GUANOSINE-2'-MONOPHOSPHATE, RIBONUCLEASE T1
Authors:Granzin, J, Puras-Lutzke, R, Landt, O, Grunert, H.-P, Heinemann, U, Saenger, W, Hahn, U.
Deposit date:1992-02-19
Release date:1993-01-15
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:RNase T1 mutant Glu46Gln binds the inhibitors 2'GMP and 2'AMP at the 3' subsite.
J.Mol.Biol., 225, 1992
3SW1
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BU of 3sw1 by Molmil
Structure of a full-length bacterial LOV protein
Descriptor: FLAVIN MONONUCLEOTIDE, Sensory box protein
Authors:Granzin, J, Batra-Safferling, R, Jaeger, K.-E, Drepper, T, Krauss, U.
Deposit date:2011-07-13
Release date:2012-02-15
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.63 Å)
Cite:Structural Basis for the Slow Dark Recovery of a Full-Length LOV Protein from Pseudomonas putida.
J.Mol.Biol., 417, 2012
3STO
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BU of 3sto by Molmil
Serpin from the trematode Schistosoma Haematobium
Descriptor: Serine protease inhibitor
Authors:Granzin, J, Weiergraeber, O.H, Lee, X, Blanton, R.E.
Deposit date:2011-07-11
Release date:2012-05-30
Last modified:2013-01-23
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:Three-dimensional structure of a schistosome serpin revealing an unusual configuration of the helical subdomain.
Acta Crystallogr.,Sect.D, 68, 2012
6GBV
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BU of 6gbv by Molmil
A fast recovering full-length LOV protein (DsLOV) from the marine phototrophic bacterium Dinoroseobacter shibae (Dark state) - M49T mutant
Descriptor: FLAVIN MONONUCLEOTIDE, PHOSPHATE ION, Putative blue-light photoreceptor
Authors:Granzin, J, Batra-Safferling, R, Roellen, K.
Deposit date:2018-04-16
Release date:2018-07-18
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Mechanistic Basis of the Fast Dark Recovery of the Short LOV Protein DsLOV from Dinoroseobacter shibae.
Biochemistry, 57, 2018
6GBA
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BU of 6gba by Molmil
A fast recovering full-length LOV protein (DsLOV) from the marine phototrophic bacterium Dinoroseobacter shibae (Dark state) - M49A mutant
Descriptor: FLAVIN MONONUCLEOTIDE, Putative blue-light photoreceptor
Authors:Granzin, J, Batra-Safferling, R, Roellen, K.
Deposit date:2018-04-13
Release date:2018-07-18
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Mechanistic Basis of the Fast Dark Recovery of the Short LOV Protein DsLOV from Dinoroseobacter shibae.
Biochemistry, 57, 2018
6GAY
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BU of 6gay by Molmil
A fast recovering full-length LOV protein (DsLOV) from the marine phototrophic bacterium Dinoroseobacter shibae (Dark state) - M49I mutant
Descriptor: FLAVIN MONONUCLEOTIDE, Putative blue-light photoreceptor, SULFATE ION
Authors:Granzin, J, Batra-Safferling, R, Roellen, K.
Deposit date:2018-04-13
Release date:2018-07-18
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Mechanistic Basis of the Fast Dark Recovery of the Short LOV Protein DsLOV from Dinoroseobacter shibae.
Biochemistry, 57, 2018
6GB3
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BU of 6gb3 by Molmil
A fast recovering full-length LOV protein (DsLOV) from the marine phototrophic bacterium Dinoroseobacter shibae (Dark state) - M49S mutant
Descriptor: FLAVIN MONONUCLEOTIDE, Putative blue-light photoreceptor
Authors:Granzin, J, Batra-Safferling, R, Roellen, K.
Deposit date:2018-04-13
Release date:2018-07-18
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.752 Å)
Cite:Mechanistic Basis of the Fast Dark Recovery of the Short LOV Protein DsLOV from Dinoroseobacter shibae.
Biochemistry, 57, 2018
8RNT
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BU of 8rnt by Molmil
STRUCTURE OF RIBONUCLEASE T1 COMPLEXED WITH ZINC(II) AT 1.8 ANGSTROMS RESOLUTION: A ZN2+.6H2O.CARBOXYLATE CLATHRATE
Descriptor: RIBONUCLEASE T1, ZINC ION
Authors:Ding, J, Choe, H.-W, Granzin, J, Saenger, W.
Deposit date:1991-09-23
Release date:1993-01-15
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of ribonuclease T1 complexed with zinc(II) at 1.8 A resolution: a Zn2+.6H2O.carboxylate clathrate.
Acta Crystallogr.,Sect.B, 48, 1992
7R5N
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BU of 7r5n by Molmil
Crystal structure of the full-length short LOV protein PF5-LOV from Pseudomonas fluorescens (dark state)
Descriptor: FLAVIN MONONUCLEOTIDE, Sensory box protein
Authors:Arinkin, V, Batra-Safferling, R, Granzin, J.
Deposit date:2022-02-11
Release date:2023-08-23
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3.45 Å)
Cite:Conserved Signal Transduction Mechanisms and Dark Recovery Kinetic Tuning in the Pseudomonadaceae Short Light, Oxygen, Voltage (LOV) Protein Family.
J.Mol.Biol., 2024
3P3K
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BU of 3p3k by Molmil
The crystal structure of translationally controlled tumor protein (TCTP) of Plasmodium falciparum
Descriptor: Translationally-controlled tumor protein homolog
Authors:Eichhorn, T, Winter, D, Dirdjaja, N, Frank, M, Krauth-Siegel, L, Granzin, J, Efferth, T.
Deposit date:2010-10-05
Release date:2011-11-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.551 Å)
Cite:Molecular interaction of artemisinin with translationally controlled tumor protein (TCTP) of Plasmodium falciparum.
Biochem Pharmacol, 85, 2013
1FIA
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BU of 1fia by Molmil
CRYSTAL STRUCTURE OF THE FACTOR FOR INVERSION STIMULATION FIS AT 2.0 ANGSTROMS RESOLUTION
Descriptor: FACTOR FOR INVERSION STIMULATION (FIS)
Authors:Kostrewa, D, Granzin, J, Choe, H.-W, Labahn, J, Saenger, W.
Deposit date:1991-12-18
Release date:1993-10-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the factor for inversion stimulation FIS at 2.0 A resolution.
J.Mol.Biol., 226, 1992
5LUV
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BU of 5luv by Molmil
Short LOV protein W619_1 in apo-state
Descriptor: CHLORIDE ION, Putative PAS/PAC sensor protein, SULFATE ION
Authors:Arinkin, V, Granzin, J, Batra-Safferling, R.
Deposit date:2016-09-12
Release date:2017-02-22
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of a LOV protein in apo-state and implications for construction of LOV-based optical tools.
Sci Rep, 7, 2017
2F4E
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N-terminal domain of FKBP42 from Arabidopsis thaliana
Descriptor: AtFKBP42
Authors:Weiergraber, O.H, Eckhoff, A, Granzin, J.
Deposit date:2005-11-23
Release date:2006-01-10
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Crystal structure of a plant immunophilin domain involved in regulation of MDR-type ABC transporters.
Febs Lett., 580, 2006
7A6P
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BU of 7a6p by Molmil
Structural determinants underlying the adduct lifetime in a short LOV protein PpSB2-LOV
Descriptor: DI(HYDROXYETHYL)ETHER, FLAVIN MONONUCLEOTIDE, Putative Sensory box protein
Authors:Arinkin, V, Granzin, J, Batra-Safferling, R.
Deposit date:2020-08-26
Release date:2021-03-10
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Structural determinants underlying the adduct lifetime in the LOV proteins of Pseudomonas putida.
Febs J., 288, 2021
3I5R
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BU of 3i5r by Molmil
PI3K SH3 domain in complex with a peptide ligand
Descriptor: Peptide ligand, Phosphatidylinositol 3-kinase regulatory subunit alpha
Authors:Batra-Safferling, R, Granzin, J, Modder, S, Hoffmann, S, Willbold, D.
Deposit date:2009-07-06
Release date:2010-03-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural studies of the phosphatidylinositol 3-kinase (PI3K) SH3 domain in complex with a peptide ligand: role of the anchor residue in ligand binding.
Biol.Chem., 391, 2010

 

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