Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 121 results

4RLF
DownloadVisualize
BU of 4rlf by Molmil
Crystal structure of a benzoate coenzyme A ligase with p-Toluic acid and o-Toluic acid
Descriptor: 2-methylbenzoic acid, 4-METHYLBENZOIC ACID, Benzoate-coenzyme A ligase, ...
Authors:Strom, S, Nosrati, M, Thornburg, C, Walker, K, Geiger, J.H.
Deposit date:2014-10-16
Release date:2015-09-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Kinetically and Crystallographically Guided Mutations of a Benzoate CoA Ligase (BadA) Elucidate Mechanism and Expand Substrate Permissivity.
Biochemistry, 54, 2015
4RM3
DownloadVisualize
BU of 4rm3 by Molmil
Crystal structure of a benzoate coenzyme A ligase with 2-Furoic acid
Descriptor: 2-FUROIC ACID, Benzoate-coenzyme A ligase
Authors:Strom, S, Nosrati, M, Thornburg, C, Walker, K.D, Geiger, J.H.
Deposit date:2014-10-18
Release date:2015-09-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Kinetically and Crystallographically Guided Mutations of a Benzoate CoA Ligase (BadA) Elucidate Mechanism and Expand Substrate Permissivity.
Biochemistry, 54, 2015
4RUU
DownloadVisualize
BU of 4ruu by Molmil
Crystal structure of the Q108K:K40L mutant of human Cellular Retinol Binding ProteinII in complex with All-trans-Retinal after 24 hour incubation at 1.4 Angstrom Resolution
Descriptor: ACETATE ION, RETINAL, Retinol-binding protein 2
Authors:Nosrati, M, Geiger, J.H.
Deposit date:2014-11-21
Release date:2014-12-10
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Tuning the electronic absorption of protein-embedded all-trans-retinal.
Science, 338, 2012
4RMN
DownloadVisualize
BU of 4rmn by Molmil
Crystal structure of a benzoate coenzyme A ligase with 2-Thiophene Carboxylic acid
Descriptor: Benzoate-coenzyme A ligase, GLYCEROL, THIOPHENE-2-CARBOXYLIC ACID
Authors:Strom, S, Nosrati, M, Thornburg, C, Walker, K.D, Geiger, J.H.
Deposit date:2014-10-21
Release date:2015-09-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Kinetically and Crystallographically Guided Mutations of a Benzoate CoA Ligase (BadA) Elucidate Mechanism and Expand Substrate Permissivity.
Biochemistry, 54, 2015
4RM2
DownloadVisualize
BU of 4rm2 by Molmil
Crystal structure of a benzoate coenzyme A ligase with 2-Fluoro benzoic acid
Descriptor: 2-fluorobenzoic acid, Benzoate-coenzyme A ligase
Authors:Strom, S, Nosrati, M, Thornburg, C, Walker, K.D, Geiger, J.H.
Deposit date:2014-10-18
Release date:2015-09-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Kinetically and Crystallographically Guided Mutations of a Benzoate CoA Ligase (BadA) Elucidate Mechanism and Expand Substrate Permissivity.
Biochemistry, 54, 2015
7ML5
DownloadVisualize
BU of 7ml5 by Molmil
Structure of the Starch Branching Enzyme I (BEI) complexed with maltododecaose from Oryza sativa L
Descriptor: Isoform 2 of 1,4-alpha-glucan-branching enzyme, chloroplastic/amyloplastic, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, ...
Authors:Nayebi Gavgani, H, Fawaz, R, Geiger, J.H.
Deposit date:2021-04-27
Release date:2021-11-17
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:A structural explanation for the mechanism and specificity of plant branching enzymes I and IIb.
J.Biol.Chem., 298, 2021
7MS9
DownloadVisualize
BU of 7ms9 by Molmil
Crystal structure of E114D mutant of Cg10062 with a covalent intermediate of the hydration of acetylenecarboxylic acid
Descriptor: 3-HYDROXY-PROPANOIC ACID, 4-oxalocrotonate tautomerase, SULFATE ION
Authors:Nayebi, G.H, Geiger, J.H, Draths, K.
Deposit date:2021-05-10
Release date:2022-02-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Cg10062 Catalysis Forges a Link between Acetylenecarboxylic Acid and Bacterial Metabolism.
Biochemistry, 60, 2021
4GKC
DownloadVisualize
BU of 4gkc by Molmil
Crystal structure of Q108K:K40L:T51V:T53C:R58W:T29L:Y19W:Q4A mutant of cellular retinol binding protein II complex with all-trans-retinal at 1.33
Descriptor: RETINAL, Retinol-binding protein 2
Authors:Nossoni, Z, Geiger, J.H.
Deposit date:2012-08-10
Release date:2012-12-26
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Tuning the electronic absorption of protein-embedded all-trans-retinal.
Science, 338, 2012
8DN1
DownloadVisualize
BU of 8dn1 by Molmil
Q108K:K40L:T51C:T53A:R58L:Q38F:Q4F mutant of hCRBPII bound to synthetic fluorophore CM1V at pH 7.2
Descriptor: (2E)-3-[7-(diethylamino)-2-oxo-2H-1-benzopyran-3-yl]prop-2-enal, bound form, GLYCEROL, ...
Authors:Bingham, C.R, Borhan, B, Geiger, J.H.
Deposit date:2022-07-10
Release date:2023-02-01
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:Light controlled reversible Michael addition of cysteine: a new tool for dynamic site-specific labeling of proteins.
Analyst, 148, 2023
4I9S
DownloadVisualize
BU of 4i9s by Molmil
Crystal Structure of the R111K:R132L:Y134F:T54V:R59W Mutant of the Cellular Retinoic Acid Binding Protein Type II in Complex with All-Trans Retinal at 2.58 Angstrom Resolution
Descriptor: Cellular retinoic acid-binding protein 2, RETINAL
Authors:Nosrati, M, Geiger, J.H.
Deposit date:2012-12-05
Release date:2013-10-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.58 Å)
Cite:Rational Design of a Colorimetric pH Sensor from a Soluble Retinoic Acid Chaperone.
J.Am.Chem.Soc., 135, 2013
4I9R
DownloadVisualize
BU of 4i9r by Molmil
Crystal Structure of the R111K:R132L:Y134F:T54V:R59W:A32W Mutant of the Cellular Retinoic Acid Binding Protein Type II in Complex with All-Trans Retinal at 2.6 Angstrom Resolution
Descriptor: Cellular retinoic acid-binding protein 2, RETINAL
Authors:Nosrati, M, Geiger, J.H.
Deposit date:2012-12-05
Release date:2013-10-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Rational Design of a Colorimetric pH Sensor from a Soluble Retinoic Acid Chaperone.
J.Am.Chem.Soc., 135, 2013
1JKF
DownloadVisualize
BU of 1jkf by Molmil
Holo 1L-myo-inositol-1-phosphate Synthase
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, myo-inositol-1-phosphate synthase
Authors:Stein, A.J, Geiger, J.H.
Deposit date:2001-07-12
Release date:2002-04-10
Last modified:2018-01-31
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The crystal structure and mechanism of 1-L-myo-inositol- 1-phosphate synthase
J.Biol.Chem., 277, 2002
1JKI
DownloadVisualize
BU of 1jki by Molmil
myo-Inositol-1-phosphate Synthase Complexed with an Inhibitor, 2-deoxy-glucitol-6-phosphate
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, 2-DEOXY-GLUCITOL-6-PHOSPHATE, AMMONIUM ION, ...
Authors:Stein, A.J, Geiger, J.H.
Deposit date:2001-07-12
Release date:2002-04-10
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The crystal structure and mechanism of 1-L-myo-inositol- 1-phosphate synthase
J.Biol.Chem., 277, 2002
1YTB
DownloadVisualize
BU of 1ytb by Molmil
CRYSTAL STRUCTURE OF A YEAST TBP/TATA-BOX COMPLEX
Descriptor: DNA (29MER), PROTEIN (TATA BINDING PROTEIN (TBP))
Authors:Kim, Y, Geiger, J.H, Hahn, S, Sigler, P.B.
Deposit date:1994-09-28
Release date:1995-01-26
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of a yeast TBP/TATA-box complex.
Nature, 365, 1993
1YP2
DownloadVisualize
BU of 1yp2 by Molmil
Crystal structure of potato tuber ADP-glucose pyrophosphorylase
Descriptor: Glucose-1-phosphate adenylyltransferase small subunit, PARA-MERCURY-BENZENESULFONIC ACID, SULFATE ION
Authors:Jin, X, Ballicora, M.A, Preiss, J, Geiger, J.H.
Deposit date:2005-01-29
Release date:2005-03-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Crystal structure of potato tuber ADP-glucose pyrophosphorylase.
Embo J., 24, 2005
1YP3
DownloadVisualize
BU of 1yp3 by Molmil
Crystal structure of potato tuber ADP-glucose pyrophosphorylase in complex with ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Glucose-1-phosphate adenylyltransferase small subunit, SULFATE ION
Authors:Jin, X, Ballicora, M.A, Preiss, J, Geiger, J.H.
Deposit date:2005-01-29
Release date:2005-03-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of potato tuber ADP-glucose pyrophosphorylase.
Embo J., 24, 2005
1YP4
DownloadVisualize
BU of 1yp4 by Molmil
Crystal structure of potato tuber ADP-glucose pyrophosphorylase in complex with ADP-glucose
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-DIPHOSPHATE-GLUCOSE, Glucose-1-phosphate adenylyltransferase small subunit, ...
Authors:Jin, X, Ballicora, M.A, Preiss, J, Geiger, J.H.
Deposit date:2005-01-29
Release date:2005-03-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of potato tuber ADP-glucose pyrophosphorylase.
Embo J., 24, 2005
2DPQ
DownloadVisualize
BU of 2dpq by Molmil
The crystal structures of the calcium-bound con-G and con-T(K7gamma) dimeric peptides demonstrate a novel metal-dependent helix-forming motif
Descriptor: CALCIUM ION, CHLORIDE ION, Conantokin-G
Authors:Cnudde, S.E, Prorok, M, Dai, Q, Castellino, F.J, Geiger, J.H.
Deposit date:2006-05-13
Release date:2007-04-24
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:The crystal structures of the calcium-bound con-G and con-T[K7gamma] dimeric peptides demonstrate a metal-dependent helix-forming motif
J.Am.Chem.Soc., 129, 2007
2DOI
DownloadVisualize
BU of 2doi by Molmil
The X-ray crystallographic structure of the angiogenesis inhibitor, angiostatin, bound to a peptide from the group A streptococcus protein PAM
Descriptor: Angiostatin, Plasminogen-binding group A streptococcal M-like protein PAM
Authors:Cnudde, S.E, Prorok, M, Castellino, F.J, Geiger, J.H.
Deposit date:2006-04-29
Release date:2006-12-05
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:X-ray crystallographic structure of the angiogenesis inhibitor, angiostatin, bound to a peptide from the group A streptococcal surface protein PAM
Biochemistry, 45, 2006
2DOH
DownloadVisualize
BU of 2doh by Molmil
The X-ray crystallographic structure of the angiogenesis inhibitor, angiostatin, bound a to a peptide from the group A streptococcal surface protein PAM
Descriptor: 1,4-DIETHYLENE DIOXIDE, Angiostatin, Plasminogen-binding group A streptococcal M-like protein PAM
Authors:Cnudde, S.E, Prorok, M, Castellino, F.J, Geiger, J.H.
Deposit date:2006-04-29
Release date:2006-12-05
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:X-ray crystallographic structure of the angiogenesis inhibitor, angiostatin, bound to a peptide from the group A streptococcal surface protein PAM
Biochemistry, 45, 2006
2DPR
DownloadVisualize
BU of 2dpr by Molmil
The crystal structures of the calcium-bound con-G and con-T(K7Glu) dimeric peptides demonstrate a novel metal-dependent helix-forming motif
Descriptor: CALCIUM ION, Conantokin-T
Authors:Cnudde, S.E, Prorok, M, Dai, Q, Castellino, F.J, Geiger, J.H.
Deposit date:2006-05-13
Release date:2007-04-24
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The crystal structures of the calcium-bound con-G and con-T[K7gamma] dimeric peptides demonstrate a metal-dependent helix-forming motif
J.Am.Chem.Soc., 129, 2007
4LPC
DownloadVisualize
BU of 4lpc by Molmil
Crystal Structure of E.Coli Branching Enzyme in complex with maltoheptaose
Descriptor: 1,4-alpha-glucan branching enzyme GlgB, GLYCEROL, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, ...
Authors:Feng, L, Geiger, J.H.
Deposit date:2013-07-16
Release date:2015-04-01
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Crystal Structures of Escherichia coli Branching Enzyme in Complex with Linear Oligosaccharides.
Biochemistry, 54, 2015
4M7M
DownloadVisualize
BU of 4m7m by Molmil
Crystal structure of the R111K:R132Q:Y134F:T54V:R59W:A32W mutant of the Cellular Retinoic Acid Binding Protein Type II in complex with All-Trans Retinal at 2.57 Angstrom Resolution
Descriptor: Cellular retinoic acid-binding protein 2, RETINAL
Authors:Nosrati, M, Geiger, J.H.
Deposit date:2013-08-12
Release date:2013-10-09
Last modified:2014-02-19
Method:X-RAY DIFFRACTION (2.571 Å)
Cite:Rational Design of a Colorimetric pH Sensor from a Soluble Retinoic Acid Chaperone.
J.Am.Chem.Soc., 135, 2013
4M6S
DownloadVisualize
BU of 4m6s by Molmil
Crystal structure of the R111K:R132Y:Y134F:T54V:R59W:A32W mutant of the Cellular Retinoic Acid Binding Protein Type II in complex with All-Trans Retinal at 2.38 Angstrom Resolution
Descriptor: Cellular retinoic acid-binding protein 2, RETINAL
Authors:Nosrati, M, Geiger, J.H.
Deposit date:2013-08-10
Release date:2013-10-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.47 Å)
Cite:Rational Design of a Colorimetric pH Sensor from a Soluble Retinoic Acid Chaperone.
J.Am.Chem.Soc., 135, 2013
4LQ1
DownloadVisualize
BU of 4lq1 by Molmil
Crystal Structure of E.Coli Branching Enzyme in complex with maltohexaose
Descriptor: 1,4-alpha-glucan branching enzyme GlgB, GLYCEROL, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, ...
Authors:Feng, L, Geiger, J.H.
Deposit date:2013-07-17
Release date:2015-04-01
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Crystal Structures of Escherichia coli Branching Enzyme in Complex with Linear Oligosaccharides.
Biochemistry, 54, 2015

221051

数据于2024-06-12公开中

PDB statisticsPDBj update infoContact PDBjnumon