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PDB: 2224 件

4A5N
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Redoxregulator HypR in its reduced form
分子名称: 1,2-ETHANEDIOL, BETA-MERCAPTOETHANOL, UNCHARACTERIZED HTH-TYPE TRANSCRIPTIONAL REGULATOR YYBR
著者Palm, G.J, Waack, P, Read, R.J, Hinrichs, W.
登録日2011-10-26
公開日2012-01-11
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Structural Insights Into the Redox-Switch Mechanism of the Marr/Duf24-Type Regulator Hypr
Nucleic Acids Res., 40, 2012
5CMV
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Ultrafast dynamics in myoglobin: dark-state, CO-ligated structure
分子名称: CARBON MONOXIDE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Barends, T.R.M, Foucar, L, Ardevol, A, Nass, K.J, Aquila, A, Botha, S, Doak, R.B, Falahati, K, Hartmann, E, Hilpert, M, Heinz, M, Hoffmann, M.C, Koefinger, J, Koglin, J, Kovacsova, G, Liang, M, Milathianaki, D, Lemke, H.T, Reinstein, J, Roome, C.M, Shoeman, R.L, Williams, G.J, Burghardt, I, Hummer, G, Boutet, S, Schlichting, I.
登録日2015-07-17
公開日2015-09-16
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Direct observation of ultrafast collective motions in CO myoglobin upon ligand dissociation.
Science, 350, 2015
5CND
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Ultrafast dynamics in myoglobin: 3 ps time delay
分子名称: CARBON MONOXIDE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Barends, T.R.M, Foucar, L, Ardevol, A, Nass, K.J, Aquila, A, Botha, S, Doak, R.B, Falahati, K, Hartmann, E, Hilpert, M, Heinz, M, Hoffmann, M.C, Koefinger, J, Koglin, J, Kovacsova, G, Liang, M, Milathianaki, D, Lemke, H.T, Reinstein, J, Roome, C.M, Shoeman, R.L, Williams, G.J, Burghardt, I, Hummer, G, Boutet, S, Schlichting, I.
登録日2015-07-17
公開日2015-09-16
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Direct observation of ultrafast collective motions in CO myoglobin upon ligand dissociation.
Science, 350, 2015
5CN5
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Ultrafast dynamics in myoglobin: 0 ps time delay
分子名称: CARBON MONOXIDE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Barends, T.R.M, Foucar, L, Ardevol, A, Nass, K.J, Aquila, A, Botha, S, Doak, R.B, Falahati, K, Hartmann, E, Hilpert, M, Heinz, M, Hoffmann, M.C, Koefinger, J, Koglin, J, Kovacsova, G, Liang, M, Milathianaki, D, Lemke, H.T, Reinstein, J, Roome, C.M, Shoeman, R.L, Williams, G.J, Burghardt, I, Hummer, G, Boutet, S, Schlichting, I.
登録日2015-07-17
公開日2015-09-16
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Direct observation of ultrafast collective motions in CO myoglobin upon ligand dissociation.
Science, 350, 2015
4AIU
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A complex structure of BtGH84
分子名称: (3AR,5R,6S,7R,7AR)-2,5-BIS(HYDROXYMETHYL)-5,6,7,7A-TETRAHYDRO-3AH-PYRANO[3,2-D][1,3]OXAZOLE-6,7-DIOL, CALCIUM ION, O-GLCNACASE BT_4395
著者He, Y, Davies, G.J.
登録日2012-02-13
公開日2012-06-20
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Metabolism of Vertebrate Amino Sugars with N-Glycolyl Groups: Intracellular Beta-O-Linked N-Glycolylglucosamine (Glcngc), Udp-Glcngc, and the Biochemical and Structural Rationale for the Substrate Tolerance of Beta-O-Linked Beta-N-Acetylglucosaminidase.
J.Biol.Chem., 287, 2012
4A99
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STRUCTURE OF THE TETRACYCLINE DEGRADING MONOOXYGENASE TETX IN COMPLEX WITH MINOCYCLINE
分子名称: (4S,4AS,5AR,12AS)-4,7-BIS(DIMETHYLAMINO)-3,10,12,12A-TETRAHYDROXY-1,11-DIOXO-1,4,4A,5,5A,6,11,12A-OCTAHYDROTETRACENE-2- CARBOXAMIDE, FLAVIN-ADENINE DINUCLEOTIDE, SULFATE ION, ...
著者Volkers, G, Palm, G.J, Weiss, M.S, Hinrichs, W.
登録日2011-11-25
公開日2012-12-12
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.18 Å)
主引用文献Putative Dioxygen-Binding Sites and Recognition of Tigecycline and Minocycline in the Tetracycline-Degrading Monooxygenase Tetx
Acta Crystallogr.,Sect.D, 69, 2013
1JOA
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NADH PEROXIDASE WITH CYSTEINE-SULFENIC ACID
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, NADH PEROXIDASE
著者Yeh, J.I, Claiborne, A.C, Hol, W.G.J.
登録日1996-07-02
公開日1997-01-11
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure of the native cysteine-sulfenic acid redox center of enterococcal NADH peroxidase refined at 2.8 A resolution.
Biochemistry, 35, 1996
1JVZ
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Structure of cephalosporin acylase in complex with glutaryl-7-aminocephalosporanic acid
分子名称: 7BETA-(4CARBOXYBUTANAMIDO) CEPHALOSPORANIC ACID, cephalosporin acylase alpha chain, cephalosporin acylase beta chain
著者Kim, Y, Hol, W.G.J.
登録日2001-09-01
公開日2002-09-01
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure of cephalosporin acylase in complex with glutaryl-7-aminocephalosporanic acid and glutarate: insight into the basis of its substrate specificity
CHEM.BIOL., 8, 2001
4AKE
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ADENYLATE KINASE
分子名称: ADENYLATE KINASE
著者Schlauderer, G.J, Schulz, G.E.
登録日1995-12-29
公開日1996-06-10
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Adenylate kinase motions during catalysis: an energetic counterweight balancing substrate binding.
Structure, 4, 1996
5CZF
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Crystal structure of the PaaA2-ParE2 antitoxin-toxin complex
分子名称: PaaA2, Plasmid stabilization protein ParE, SULFATE ION
著者Loris, R, Sterckx, Y.G.J.
登録日2015-07-31
公開日2016-06-01
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.671 Å)
主引用文献A unique hetero-hexadecameric architecture displayed by the Escherichia coli O157 PaaA2-ParE2 antitoxin-toxin complex.
J.Mol.Biol., 428, 2016
4AO9
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Biochemical properties and crystal structure of a novel beta- phenylalanine aminotransferase from Variovorax paradoxus
分子名称: BETA-PHENYLALANINE AMINOTRANSFERASE, GLYCEROL, PYRIDOXAL-5'-PHOSPHATE
著者Crismaru, C.G, Wybenga, G.G, Szymanski, W, Wijma, H.J, Wu, B, deWildeman, S, Poelarends, G.J, Dijkstra, B.W, Janssen, D.B.
登録日2012-03-25
公開日2012-10-24
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Biochemical Properties and Crystal Structure of a Novel Beta-Phenylalanine Aminotransferase from Variovorax Paradoxus
Appl.Environ.Microbiol., 79, 2013
1HTL
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MUTATION OF A BURIED RESIDUE CAUSES LACK OF ACTIVITY BUT NO CONFORMATIONAL CHANGE: CRYSTAL STRUCTURE OF E. COLI HEAT-LABILE ENTEROTOXIN MUTANT VAL 97--> LYS
分子名称: HEAT-LABILE ENTEROTOXIN, SUBUNIT A, SUBUNIT B
著者Merritt, E.A, Hol, W.G.J.
登録日1995-02-15
公開日1995-04-20
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Mutation of a buried residue causes loss of activity but no conformational change in the heat-labile enterotoxin of Escherichia coli.
Nat.Struct.Biol., 2, 1995
4B1Q
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NMR structure of the glycosylated conotoxin CcTx from Conus consors
分子名称: CONOTOXIN CCTX, alpha-L-galactopyranose-(1-2)-beta-D-galactopyranose-(1-3)-[alpha-L-galactopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-6)]2-acetamido-2-deoxy-alpha-D-galactopyranose
著者Hocking, H.G, Gerwig, G.J, Favreau, P, Stocklin, R, Kamerling, J.P, Boelens, R.
登録日2012-07-12
公開日2013-02-06
最終更新日2020-07-29
実験手法SOLUTION NMR
主引用文献Structure of the O-Glycosylated Conopeptide Cctx from Conus Consors Venom.
Chemistry, 19, 2013
4AYP
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Structure of The GH47 processing alpha-1,2-mannosidase from Caulobacter strain K31 in complex with thiomannobioside
分子名称: CALCIUM ION, MANNOSYL-OLIGOSACCHARIDE 1,2-ALPHA-MANNOSIDASE, SODIUM ION, ...
著者Thompson, A.J, Dabin, J, Iglesias-Fernandez, J, Iglesias-Fernandez, A, Dinev, Z, Williams, S.J, Siriwardena, A, Moreland, C, Hu, T.C, Smith, D.K, Gilbert, H.J, Rovira, C, Davies, G.J.
登録日2012-06-21
公開日2013-01-30
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (0.85 Å)
主引用文献The Reaction Coordinate of a Bacterial Gh47 Alpha-Mannosidase: A Combined Quantum Mechanical and Structural Approach.
Angew.Chem.Int.Ed.Engl., 51, 2012
4B1R
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Tetracycline repressor class D mutant H100A in complex with iso-7- Chlortetracycline
分子名称: CHLORIDE ION, ISO-7-CHLORTETRACYCLINE, TETRACYCLINE REPRESSOR PROTEIN CLASS D
著者Eltschkner, S, Palm, G.J, Schneider, J, Hinrichs, W.
登録日2012-07-12
公開日2013-07-24
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Tetracycline Repressor Class D Mutant H100A in Complex with Iso-7-Chlortetracycline
To be Published
4B1L
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CARBOHYDRATE BINDING MODULE CBM66 FROM BACILLUS SUBTILIS
分子名称: LEVANASE, SODIUM ION, beta-D-fructofuranose
著者Cuskin, F, Flint, J.E, Morland, C, Basle, A, Henrissat, B, Countinho, P.M, Strazzulli, A, Solzehinkin, A, Davies, G.J, Gilbert, H.J, Gloster, T.M.
登録日2012-07-11
公開日2012-12-12
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献How Nature Can Exploit Nonspecific Catalytic and Carbohydrate Binding Modules to Create Enzymatic Specificity
Proc.Natl.Acad.Sci.USA, 109, 2012
4B3L
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Family 1 6-phospho-beta-D glycosidase from Streptococcus pyogenes
分子名称: BETA-GLUCOSIDASE
著者Stepper, J, Dabin, J, Ekloef, J.M, Thongpoo, P, Kongsaeree, P.T, Taylor, E.J, Turkenburg, J.P, Brumer, H, Davies, G.J.
登録日2012-07-24
公開日2013-01-09
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.51 Å)
主引用文献Structure and Activity of the Streptococcus Pyogenes Family Gh1 6-Phospho Beta-Glycosidase Spy1599
Acta Crystallogr.,Sect.D, 69, 2013
4B9Z
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Crystal Structure of Agd31B, alpha-transglucosylase, complexed with Acarbose
分子名称: 1,2-ETHANEDIOL, 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, ALPHA-GLUCOSIDASE, ...
著者Larsbrink, J, Izumi, A, Hemsworth, G.R, Davies, G.J, Brumer, H.
登録日2012-09-09
公開日2012-11-14
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural Enzymology of Cellvibrio Japonicus Agd31B Reveals Alpha-Transglucosylase Activity in Glycoside Hydrolase Family 31
J.Biol.Chem., 287, 2012
4AZ4
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E.coli deformylase with Co(II) and hydrosulfide
分子名称: COBALT (II) ION, HYDROSULFURIC ACID, PEPTIDE DEFORMYLASE
著者Palm, G.J, Hinrichs, W.
登録日2012-06-22
公開日2012-08-22
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献A Fret Enzyme-Based Probe for Monitoring Hydrogen Sulfide.
Inorg.Chem., 51, 2012
1IIZ
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Crystal Structure of the Induced Antibacterial Protein from Tasar Silkworm, Antheraea mylitta
分子名称: LYSOZYME
著者Jain, D, Nair, D.T, Swaminathan, G.J, Abraham, E.G, Nagaraju, J, Salunke, D.M.
登録日2001-04-24
公開日2001-12-12
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure of the induced antibacterial protein from tasar silkworm, Antheraea mylitta. Implications to molecular evolution.
J.Biol.Chem., 276, 2001
4B2V
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S64, a spider venom toxin peptide from Sicarius dolichocephalus
分子名称: S64
著者Loening, N.M, Wilson, Z.N, Zobel-Thropp, P.A, Binford, G.J.
登録日2012-07-18
公開日2013-01-16
最終更新日2013-02-06
実験手法SOLUTION NMR
主引用文献Solution Structures of Two Homologous Venom Peptides from Sicarius Dolichocephalus
Plos One, 8, 2013
4B3A
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Tetracycline repressor class D mutant H100A in complex with tetracycline
分子名称: CHLORIDE ION, MAGNESIUM ION, TETRACYCLINE, ...
著者Eltschkner, S, Schindler, S, Palm, G.J, Schneider, J, Hinrichs, W.
登録日2012-07-23
公開日2013-06-12
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Thermodynamics, cooperativity and stability of the tetracycline repressor (TetR) upon tetracycline binding.
Biochim Biophys Acta Proteins Proteom, 1868, 2020
4BA0
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Crystal Structure of Agd31B, alpha-transglucosylase, complexed with 5F-alpha-GlcF
分子名称: 1,2-ETHANEDIOL, 5-fluoro-beta-D-glucopyranose, ALPHA-GLUCOSIDASE, ...
著者Larsbrink, J, Izumi, A, Hemsworth, G.R, Davies, G.J, Brumer, H.
登録日2012-09-09
公開日2012-11-14
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural Enzymology of Cellvibrio Japonicus Agd31B Reveals Alpha-Transglucosylase Activity in Glycoside Hydrolase Family 31
J.Biol.Chem., 287, 2012
4B9Y
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Crystal Structure of Apo Agd31B, alpha-transglucosylase in Glycoside Hydrolase Family 31
分子名称: 1,2-ETHANEDIOL, ALPHA-GLUCOSIDASE, PUTATIVE, ...
著者Larsbrink, J, Izumi, A, Hemsworth, G.R, Davies, G.J, Brumer, H.
登録日2012-09-09
公開日2012-11-14
最終更新日2013-01-16
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural Enzymology of Cellvibrio Japonicus Agd31B Reveals Alpha-Transglucosylase Activity in Glycoside Hydrolase Family 31
J.Biol.Chem., 287, 2012
4AYR
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Structure of The GH47 processing alpha-1,2-mannosidase from Caulobacter strain K31 in complex with noeuromycin
分子名称: (3S,4R,5R)-3,4-DIHYDROXY-5-(HYDROXYMETHYL)PIPERIDIN-2-ONE, 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, CALCIUM ION, ...
著者Thompson, A.J, Dabin, J, Iglesias-Fernandez, J, Iglesias-Fernandez, A, Dinev, Z, Williams, S.J, Siriwardena, A, Moreland, C, Hu, T.C, Smith, D.K, Gilbert, H.J, Rovira, C, Davies, G.J.
登録日2012-06-21
公開日2013-01-30
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献The Reaction Coordinate of a Bacterial Gh47 Alpha-Mannosidase: A Combined Quantum Mechanical and Structural Approach.
Angew.Chem.Int.Ed.Engl., 51, 2012

224004

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