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PDB: 297 件
1BK1
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ENDO-1,4-BETA-XYLANASE C
分子名称: ENDO-1,4-B-XYLANASE C
著者Fushinobu, S, Ito, K, Konno, M, Wakagi, T, Matsuzawa, H.
登録日1998-07-14
公開日1999-01-13
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystallographic and mutational analyses of an extremely acidophilic and acid-stable xylanase: biased distribution of acidic residues and importance of Asp37 for catalysis at low pH.
Protein Eng., 11, 1998
3R1M
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Structure of bifunctional fructose 1,6-bisphosphate aldolase/phosphatase (aldolase form)
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,3-DIHYDROXYACETONEPHOSPHATE, MAGNESIUM ION, ...
著者Fushinobu, S, Nishimasu, H, Hattori, D, Song, H.-J, Wakagi, T.
登録日2011-03-10
公開日2011-10-12
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural basis for the bifunctionality of fructose-1,6-bisphosphate aldolase/phosphatase.
Nature, 478, 2011
8HVB
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Crystal structure of lacto-N-biosidase StrLNBase from Streptomyces sp. strain 142, lacto-N-biose complex
分子名称: 2-acetamido-2-deoxy-alpha-D-glucopyranose, Lacto-N-biosidase, beta-D-galactopyranose
著者Fushinobu, S, Yamada, C, Fujio, N.
登録日2022-12-26
公開日2023-12-27
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure of glycoside hydrolase family 20 lacto-N-biosidase from soil bacterium Streptomyces sp. strain 142
to be published
8HVC
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Crystal structure of lacto-N-biosidase StrLNBase from Streptomyces sp. strain 142, galacto-N-biose complex 1
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Lacto-N-biosidase, beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose
著者Fushinobu, S, Yamada, C, Fujio, N.
登録日2022-12-26
公開日2023-12-27
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Crystal structure of glycoside hydrolase family 20 lacto-N-biosidase from soil bacterium Streptomyces sp. strain 142
to be published
8HVD
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Crystal structure of lacto-N-biosidase StrLNBase from Streptomyces sp. strain 142, galacto-N-biose complex 2
分子名称: Lacto-N-biosidase, beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-alpha-D-galactopyranose
著者Fushinobu, S, Yamada, C, Fujio, N.
登録日2022-12-26
公開日2023-12-27
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.41 Å)
主引用文献Crystal structure of glycoside hydrolase family 20 lacto-N-biosidase from soil bacterium Streptomyces sp. strain 142
to be published
3QG0
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Crystal Structure of Cellvibrio gilvus Cellobiose Phosphorylase Complexed with Phosphate and 1-Deoxynojirimycin
分子名称: 1-DEOXYNOJIRIMYCIN, Cellobiose Phosphorylase, PHOSPHATE ION, ...
著者Fushinobu, S, Hidaka, M, Hayashi, A.M, Wakagi, T, Shoun, H, Kitaoka, M.
登録日2011-01-24
公開日2011-09-21
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Interactions between glycoside hydrolase family 94 cellobiose phosphorylase and glucosidase inhibitors
J.Appl.Glyosci., 58, 2011
3RI9
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Xylanase C from Aspergillus kawachii F131W mutant
分子名称: Endo-1,4-beta-xylanase 3
著者Fushinobu, S, Uno, T, Kitaoka, M, Hayashi, K, Matsuzawa, H, Wakagi, T.
登録日2011-04-13
公開日2011-09-21
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Mutational analysis of fungal family 11 xylanases on pH optimum determination
J.APPL.GLYOSCI., 58, 2011
3RI8
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Xylanase C from Aspergillus kawachii D37N mutant
分子名称: Endo-1,4-beta-xylanase 3
著者Fushinobu, S, Uno, T, Kitaoka, M, Hayashi, K, Matsuzawa, H, Wakagi, T.
登録日2011-04-13
公開日2011-10-12
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Mutational analysis of fungal family 11 xylanases on pH optimum determination
J.APPL.GLYOSCI., 58, 2011
1WU5
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Crystal structure of reducing-end-xylose releasing exo-oligoxylanase complexed with xylose
分子名称: GLYCEROL, NICKEL (II) ION, beta-D-xylopyranose, ...
著者Fushinobu, S, Hidaka, M, Honda, Y, Wakagi, T, Shoun, H, Kitaoka, M.
登録日2004-12-01
公開日2005-02-22
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural Basis for the Specificity of the Reducing End Xylose-releasing Exo-oligoxylanase from Bacillus halodurans C-125
J.Biol.Chem., 280, 2005
1WU4
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Crystal structure of reducing-end-xylose releasing exo-oligoxylanase
分子名称: GLYCEROL, NICKEL (II) ION, xylanase Y
著者Fushinobu, S, Hidaka, M, Honda, Y, Wakagi, T, Shoun, H, Kitaoka, M.
登録日2004-12-01
公開日2005-02-22
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Structural Basis for the Specificity of the Reducing End Xylose-releasing Exo-oligoxylanase from Bacillus halodurans C-125
J.Biol.Chem., 280, 2005
1WU6
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Crystal structure of reducing-end-xylose releasing exo-oligoxylanase E70A mutant complexed with xylobiose
分子名称: GLYCEROL, NICKEL (II) ION, beta-D-xylopyranose-(1-4)-beta-D-xylopyranose, ...
著者Fushinobu, S, Hidaka, M, Honda, Y, Wakagi, T, Shoun, H, Kitaoka, M.
登録日2004-12-01
公開日2005-02-22
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Structural Basis for the Specificity of the Reducing End Xylose-releasing Exo-oligoxylanase from Bacillus halodurans C-125
J.Biol.Chem., 280, 2005
3QFZ
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Crystal Structure of Cellvibrio gilvus Cellobiose Phosphorylase Complexed with Sulfate and 1-Deoxynojirimycin
分子名称: 1-DEOXYNOJIRIMYCIN, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Cellobiose Phosphorylase, ...
著者Fushinobu, S, Hidaka, M, Hayashi, A.M, Wakagi, T, Shoun, H, Kitaoka, M.
登録日2011-01-24
公開日2011-09-21
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.39 Å)
主引用文献Interactions between glycoside hydrolase family 94 cellobiose phosphorylase and glucosidase inhibitors
J.Appl.Glyosci., 58, 2011
3QFY
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Crystal Structure of Cellvibrio gilvus Cellobiose Phosphorylase Complexed with Sulfate and Isofagomine
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 5-HYDROXYMETHYL-3,4-DIHYDROXYPIPERIDINE, Cellobiose Phosphorylase, ...
著者Fushinobu, S, Hidaka, M, Hayashi, A.M, Wakagi, T, Shoun, H, Kitaoka, M.
登録日2011-01-24
公開日2011-09-21
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Interactions between glycoside hydrolase family 94 cellobiose phosphorylase and glucosidase inhibitors
J.Appl.Glyosci., 58, 2011
2DRR
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BU of 2drr by Molmil
Crystal structure of reducing-end-xylose releasing exo-oligoxylanase D263N mutant
分子名称: GLYCEROL, NICKEL (II) ION, Xylanase Y
著者Fushinobu, S, Hidaka, M, Honda, Y, Wakagi, T, Shoun, H, Kitaoka, M.
登録日2006-06-12
公開日2006-06-27
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural explanation for the acquisition of glycosynthase activity
J.Biochem., 2009
2DRS
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BU of 2drs by Molmil
Crystal structure of reducing-end-xylose releasing exo-oligoxylanase D263S mutant
分子名称: GLYCEROL, NICKEL (II) ION, Xylanase Y
著者Fushinobu, S, Hidaka, M, Honda, Y, Wakagi, T, Shoun, H, Kitaoka, M.
登録日2006-06-12
公開日2006-06-27
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural explanation for the acquisition of glycosynthase activity
J.Biochem., 2009
2DRO
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BU of 2dro by Molmil
Crystal structure of reducing-end-xylose releasing exo-oligoxylanase D263C mutant
分子名称: GLYCEROL, NICKEL (II) ION, Xylanase Y
著者Fushinobu, S, Hidaka, M, Honda, Y, Wakagi, T, Shoun, H, Kitaoka, M.
登録日2006-06-12
公開日2006-06-27
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural explanation for the acquisition of glycosynthase activity
J.Biochem., 2009
2DRQ
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BU of 2drq by Molmil
Crystal structure of reducing-end-xylose releasing exo-oligoxylanase D263G mutant
分子名称: GLYCEROL, NICKEL (II) ION, Xylanase Y
著者Fushinobu, S, Hidaka, M, Honda, Y, Wakagi, T, Shoun, H, Kitaoka, M.
登録日2006-06-12
公開日2006-06-27
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural explanation for the acquisition of glycosynthase activity
J.Biochem., 2009
2DEP
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BU of 2dep by Molmil
Crystal Structure of xylanase B from Clostridium stercorarium F9
分子名称: Thermostable celloxylanase
著者Fushinobu, S, Nishimoto, M, Miyanaga, A, Kitaoka, M, Hayashi, K.
登録日2006-02-16
公開日2007-01-16
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Molecular anatomy of the alkaliphilic xylanase from Bacillus halodurans C-125
To be Published
1J30
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The crystal structure of sulerythrin, a rubrerythrin-like protein from a strictly aerobic and thermoacidiphilic archaeon
分子名称: 144aa long hypothetical rubrerythrin, FE (III) ION, OXYGEN MOLECULE, ...
著者Fushinobu, S, Shoun, H, Wakagi, T.
登録日2003-01-16
公開日2003-10-14
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献The Crystal Structure of Sulerythrin, A Rubrerythrin-like Protein from A Strictly Aerobic Archaeon, Sulfolobus tokodaii strain 7, shows unexpected domain swapping
Biochemistry, 42, 2003
1IUP
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BU of 1iup by Molmil
meta-Cleavage product hydrolase from Pseudomonas fluorescens IP01 (CumD) S103A mutant complexed with isobutyrates
分子名称: 2-METHYL-PROPIONIC ACID, meta-Cleavage product hydrolase
著者Fushinobu, S, Saku, T, Hidaka, M, Jun, S.-Y, Nojiri, H, Yamane, H, Shoun, H, Omori, T, Wakagi, T.
登録日2002-03-06
公開日2002-09-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structures of a meta-cleavage product hydrolase from Pseudomonas fluorescens IP01 (CumD) complexed with cleavage products
PROTEIN SCI., 11, 2002
1IUN
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meta-Cleavage product hydrolase from Pseudomonas fluorescens IP01 (CumD) S103A mutant hexagonal
分子名称: ACETATE ION, meta-Cleavage product hydrolase
著者Fushinobu, S, Saku, T, Hidaka, M, Jun, S.-Y, Nojiri, H, Yamane, H, Shoun, H, Omori, T, Wakagi, T.
登録日2002-03-06
公開日2002-09-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structures of a meta-cleavage product hydrolase from Pseudomonas fluorescens IP01 (CumD) complexed with cleavage products
PROTEIN SCI., 11, 2002
1IUO
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meta-Cleavage product hydrolase from Pseudomonas fluorescens IP01 (CumD) S103A mutant complexed with acetates
分子名称: ACETATE ION, meta-Cleavage product hydrolase
著者Fushinobu, S, Saku, T, Hidaka, M, Jun, S.-Y, Nojiri, H, Yamane, H, Shoun, H, Omori, T, Wakagi, T.
登録日2002-03-06
公開日2002-09-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structures of a meta-cleavage product hydrolase from Pseudomonas fluorescens IP01 (CumD) complexed with cleavage products
PROTEIN SCI., 11, 2002
1UK6
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Crystal structure of a meta-cleavage product hydrolase (CumD) complexed with propionate
分子名称: 2-hydroxy-6-oxo-7-methylocta-2,4-dienoate hydrolase, PROPANOIC ACID
著者Fushinobu, S, Jun, S.-Y, Hidaka, M, Nojiri, H, Yamane, H, Shoun, H, Omori, T, Wakagi, T.
登録日2003-08-19
公開日2004-09-14
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献A Series of Crystal Structures of a meta-Cleavage Product Hydrolase from Pseudomonas fluorescens IP01 (CumD) Complexed with Various Cleavage Products
BIOSCI.BIOTECHNOL.BIOCHEM., 69, 2005
1UK8
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Crystal structure of a meta-cleavage product hydrolase (CumD) complexed with n-valerate
分子名称: 2-hydroxy-6-oxo-7-methylocta-2,4-dienoate hydrolase, PENTANOIC ACID
著者Fushinobu, S, Jun, S.-Y, Hidaka, M, Nojiri, H, Yamane, H, Shoun, H, Omori, T, Wakagi, T.
登録日2003-08-19
公開日2004-09-14
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献A Series of Crystal Structures of a meta-Cleavage Product Hydrolase from Pseudomonas fluorescens IP01 (CumD) Complexed with Various Cleavage Products
BIOSCI.BIOTECHNOL.BIOCHEM., 69, 2005
1UK7
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Crystal structure of a meta-cleavage product hydrolase (CumD) complexed with n-butyrate
分子名称: 2-hydroxy-6-oxo-7-methylocta-2,4-dienoate hydrolase, butanoic acid
著者Fushinobu, S, Jun, S.-Y, Hidaka, M, Nojiri, H, Yamane, H, Shoun, H, Omori, T, Wakagi, T.
登録日2003-08-19
公開日2004-09-14
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献A Series of Crystal Structures of a meta-Cleavage Product Hydrolase from Pseudomonas fluorescens IP01 (CumD) Complexed with Various Cleavage Products
BIOSCI.BIOTECHNOL.BIOCHEM., 69, 2005

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