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PDB: 104 results

2ZQX
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BU of 2zqx by Molmil
Cytochrome P450BSbeta cocrystallized with heptanoic acid
Descriptor: Cytochrome P450 152A1, PROTOPORPHYRIN IX CONTAINING FE
Authors:Shoji, O, Fujishiro, T, Nagano, S, Hirose, T, Shiro, Y, Watanabe, Y.
Deposit date:2008-08-22
Release date:2009-08-25
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:Understanding substrate misrecognition of hydrogen peroxide dependent cytochrome P450 from Bacillus subtilis.
J.Biol.Inorg.Chem., 2010
5ZSS
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BU of 5zss by Molmil
L-Cysteine-PLP reaction intermediate of NifS from Hydrogenimonas thermophila
Descriptor: Cysteine desulfurase, N-({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)-L-CYSTEINE
Authors:Nakamura, T, Fujishiro, T, Takahashi, Y.
Deposit date:2018-04-29
Release date:2019-05-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.17 Å)
Cite:X-ray snapshots of two classes of cysteine desulfurase enzymes NifS and SufS
to be published
5ZSR
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BU of 5zsr by Molmil
NifS from Hydrogenimonas thermophila, soaked with L-cysteine for 8 min
Descriptor: Cysteine desulfurase
Authors:Nakamura, R, Fujishiro, T, Takahashi, Y.
Deposit date:2018-04-29
Release date:2019-05-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:X-ray snapshots of two classes of cysteine desulfurase enzymes NifS and SufS
to be published
5ZST
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BU of 5zst by Molmil
NifS from Hydrogenimonas thermopile in a persulfurated form
Descriptor: Cysteine desulfurase
Authors:Nakamura, R, Fujishiro, T, Takahashi, Y.
Deposit date:2018-04-29
Release date:2019-05-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Snapshots of PLP-substrate and PLP-product external aldimines as intermediates in two types of cysteine desulfurase enzymes.
Febs J., 287, 2020
5ZSQ
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BU of 5zsq by Molmil
NifS from Hydrogenimonas thermophila, soaked with L-cysteine for 4 min
Descriptor: Cysteine desulfurase
Authors:Nakamura, R, Fujishiro, T, Takahashi, Y.
Deposit date:2018-04-29
Release date:2019-05-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.211 Å)
Cite:X-ray snapshots of two classes of cysteine desulfurase enzymes NifS and SufS
to be published
5ZSK
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BU of 5zsk by Molmil
SufS from Bacillus subtilis soaked with L-cysteine for 63 sec
Descriptor: 2-[(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL)-AMINO]-PROPIONIC ACID, Cysteine desulfurase SufS
Authors:Nakamura, R, Fujishiro, T, Takahashi, Y.
Deposit date:2018-04-28
Release date:2019-05-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.24 Å)
Cite:Snapshots of PLP-substrate and PLP-product external aldimines as intermediates in two types of cysteine desulfurase enzymes.
Febs J., 287, 2020
5ZSP
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BU of 5zsp by Molmil
NifS from Hydrogenimonas thermophila
Descriptor: Cysteine desulfurase
Authors:Nakamura, R, Fujishiro, T, Takahashi, Y.
Deposit date:2018-04-29
Release date:2019-05-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:Snapshots of PLP-substrate and PLP-product external aldimines as intermediates in two types of cysteine desulfurase enzymes.
Febs J., 287, 2020
5ZSO
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BU of 5zso by Molmil
SufS from Bacillus subtilis, soaked with L-cysteine for 90 sec
Descriptor: Cysteine desulfurase SufS, DI(HYDROXYETHYL)ETHER, N-({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)-L-CYSTEINE
Authors:Nakamura, R, Fujishiro, T, Takahashi, Y.
Deposit date:2018-04-29
Release date:2019-05-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Snapshots of PLP-substrate and PLP-product external aldimines as intermediates in two types of cysteine desulfurase enzymes.
Febs J., 287, 2020
6KFY
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BU of 6kfy by Molmil
SufS from Bacillus subtilis in a resting state at 1.96 angstrom resolution
Descriptor: Cysteine desulfurase SufS, DI(HYDROXYETHYL)ETHER, SULFATE ION, ...
Authors:Nakamura, R, Takahashi, Y, Fujishiro, T.
Deposit date:2019-07-09
Release date:2020-07-15
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Cycloserine enantiomers inhibit PLP-dependent cysteine desulfurase SufS via distinct mechanisms.
Febs J., 2022
7XEJ
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BU of 7xej by Molmil
SufS with D-cysteine for 5 min
Descriptor: (2~{S})-2-[(~{E})-[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylideneamino]-3-sulfanyl-propanoic acid, 1,2-ETHANEDIOL, Cysteine desulfurase SufS, ...
Authors:Nakamiura, R, Fujishiro, T.
Deposit date:2022-03-31
Release date:2023-04-05
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:X-ray crystallographic snapshots of the thioazolidine formation upon the PLP during inhibition of SufS by D-cysteine
to be published
7XES
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BU of 7xes by Molmil
NifS with L-penicillamine
Descriptor: (2~{R})-3-methyl-2-[(~{E})-[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylideneamino]-3-sulfanyl-butanoic acid, CHLORIDE ION, Cysteine desulfurase IscS, ...
Authors:Nakamura, R, Fujishiro, T.
Deposit date:2022-03-31
Release date:2023-04-05
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3 Å)
Cite:X-ray crystallographic snapshots of the thioazolidine formation upon the PLP during inhibition of SufS by D-cysteine
to be published
7XEK
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BU of 7xek by Molmil
SufS with D-cysteine for 6 h
Descriptor: (2~{S},4~{S})-2-[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]-1,3-thiazolidine-4-carboxylic acid, 1,2-ETHANEDIOL, Cysteine desulfurase SufS, ...
Authors:Nakamura, R, Fujishiro, T.
Deposit date:2022-03-31
Release date:2023-04-05
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:X-ray crystallographic snapshots of the thioazolidine formation upon the PLP during inhibition of SufS by D-cysteine
to be published
7XEN
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BU of 7xen by Molmil
SufS with L-penicillamine
Descriptor: (2~{R})-3-methyl-2-[(~{E})-[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylideneamino]-3-sulfanyl-butanoic acid, Cysteine desulfurase SufS
Authors:Nakamura, R, Fujishiro, T.
Deposit date:2022-03-31
Release date:2023-04-05
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.47 Å)
Cite:X-ray crystallographic snapshots of the thioazolidine formation upon the PLP during inhibition of SufS by D-cysteine
to be published
7XET
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BU of 7xet by Molmil
SufS with beta-cyano-L-alanine
Descriptor: (2~{E})-3-cyano-2-[[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylimino]propanoic acid, Cysteine desulfurase SufS, DI(HYDROXYETHYL)ETHER, ...
Authors:Nakamura, R, Fujishiro, T.
Deposit date:2022-03-31
Release date:2023-04-05
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Inhibition mechanism of SufS by L-propargylglycine
to be published
7XEP
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BU of 7xep by Molmil
SufS with L-propargylglycine
Descriptor: 1,2-ETHANEDIOL, Cysteine desulfurase SufS, DI(HYDROXYETHYL)ETHER, ...
Authors:Nakamura, R, Fujishiro, T.
Deposit date:2022-03-31
Release date:2023-04-05
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Inhibition mechanism of SufS by L-propargylglycine
to be published
7XEQ
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BU of 7xeq by Molmil
NifS with D-cysteine
Descriptor: (2~{S},4~{S})-2-[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]-1,3-thiazolidine-4-carboxylic acid, CHLORIDE ION, Cysteine desulfurase IscS, ...
Authors:Nakamura, R, Fujishiro, T.
Deposit date:2022-03-31
Release date:2023-04-05
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:X-ray crystallographic snapshots of the thioazolidine formation upon the PLP during inhibition of SufS by D-cysteine
to be published
7XEL
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BU of 7xel by Molmil
SufS soaked with D-penicillamine
Descriptor: 1,2-ETHANEDIOL, Cysteine desulfurase SufS, DI(HYDROXYETHYL)ETHER, ...
Authors:Nakamura, R, Fujishiro, T.
Deposit date:2022-03-31
Release date:2023-04-05
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:X-ray crystallographic snapshots of the thioazolidine formation upon the PLP during inhibition of SufS by D-cysteine
to be published
6KG1
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BU of 6kg1 by Molmil
NifS from Helicobacter pylori, soaked with L-cysteine for 180 sec
Descriptor: 2-[(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL)-AMINO]-PROPIONIC ACID, CHLORIDE ION, Cysteine desulfurase IscS, ...
Authors:Nakamura, R, Takahashi, Y, Fujishiro, T.
Deposit date:2019-07-09
Release date:2019-10-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Snapshots of PLP-substrate and PLP-product external aldimines as intermediates in two types of cysteine desulfurase enzymes.
Febs J., 287, 2020
6KG0
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BU of 6kg0 by Molmil
NifS from Helicobacter pylori, soaked with L-cysteine for 118 sec
Descriptor: CHLORIDE ION, Cysteine desulfurase IscS, ISOPROPYL ALCOHOL, ...
Authors:Nakamura, R, Takahashi, Y, Fujishiro, T.
Deposit date:2019-07-09
Release date:2019-10-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.78 Å)
Cite:Snapshots of PLP-substrate and PLP-product external aldimines as intermediates in two types of cysteine desulfurase enzymes.
Febs J., 287, 2020
6KFZ
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BU of 6kfz by Molmil
SufS from Bacillus subtilis, soaked with L-cysteine for 90 sec at 1.96 angstrom resolution
Descriptor: Cysteine desulfurase SufS, DI(HYDROXYETHYL)ETHER, N-({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)-L-CYSTEINE
Authors:Nakamura, R, Takahashi, Y, Fujishiro, T.
Deposit date:2019-07-09
Release date:2019-10-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Snapshots of PLP-substrate and PLP-product external aldimines as intermediates in two types of cysteine desulfurase enzymes.
Febs J., 287, 2020
7YB3
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BU of 7yb3 by Molmil
SufS with D-cysteine for 1 min
Descriptor: Cysteine desulfurase SufS, DI(HYDROXYETHYL)ETHER, TRIETHYLENE GLYCOL
Authors:Nakamura, R, Fujishiro, T.
Deposit date:2022-06-28
Release date:2023-07-05
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Snapshots of thiazolidine fomration of PLP-dependent enzyme SufS
to be published
5ZS9
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BU of 5zs9 by Molmil
SufS from Bacillus subtilis in the resting state
Descriptor: Cysteine desulfurase SufS, DI(HYDROXYETHYL)ETHER
Authors:Nakamura, R, Fujishiro, T, Takahashi, Y.
Deposit date:2018-04-28
Release date:2019-05-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Snapshots of PLP-substrate and PLP-product external aldimines as intermediates in two types of cysteine desulfurase enzymes.
Febs J., 287, 2020
7E6A
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BU of 7e6a by Molmil
Crystal structure of cysteine desulfurase SufS C361A from Bacillus subtilis
Descriptor: 1,2-ETHANEDIOL, Cysteine desulfurase SufS, DI(HYDROXYETHYL)ETHER, ...
Authors:Nakamura, R, Takahashi, Y, Fujishiro, T.
Deposit date:2021-02-22
Release date:2022-03-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Cycloserine enantiomers inhibit PLP-dependent cysteine desulfurase SufS via distinct mechanisms.
Febs J., 289, 2022
7E6E
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BU of 7e6e by Molmil
Crystal structure of PMP-bound form of cysteine desulfurase SufS R376A from Bacillus subtilis in D-cycloserine-inhibition
Descriptor: 1,2-ETHANEDIOL, 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, Cysteine desulfurase SufS, ...
Authors:Nakamura, R, Takahashi, Y, Fujishiro, T.
Deposit date:2021-02-22
Release date:2022-03-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Cycloserine enantiomers inhibit PLP-dependent cysteine desulfurase SufS via distinct mechanisms.
Febs J., 289, 2022
7E6C
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BU of 7e6c by Molmil
Crystal structure of L-cycloserine-bound form of cysteine desulfurase SufS C361A from Bacillus subtilis
Descriptor: (5-hydroxy-6-methyl-4-{[(3-oxo-2,3-dihydro-1,2-oxazol-4-yl)amino]methyl}pyridin-3-yl)methyl dihydrogen phosphate, 1,2-ETHANEDIOL, Cysteine desulfurase SufS, ...
Authors:Nakamura, R, Takahashi, Y, Fujishiro, T.
Deposit date:2021-02-22
Release date:2022-03-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Cycloserine enantiomers inhibit PLP-dependent cysteine desulfurase SufS via distinct mechanisms.
Febs J., 289, 2022

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