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PDB: 231 results

6FA5
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BU of 6fa5 by Molmil
CRYSTAL STRUCTURE OF THE DEAH-BOX HELICASE PRP2 IN COMPLEX WITH ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DI(HYDROXYETHYL)ETHER, MAGNESIUM ION, ...
Authors:Hamann, F, Schmitt, A, Neumann, P, Ficner, R.
Deposit date:2017-12-15
Release date:2018-07-11
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.303 Å)
Cite:Crystal structure of the spliceosomal DEAH-box ATPase Prp2.
Acta Crystallogr D Struct Biol, 74, 2018
4H6C
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BU of 4h6c by Molmil
Crystal Structure of the Allene Oxide Cyclase 1 from Physcomitrella patens
Descriptor: Allene oxide cyclase, HEXANE-1,6-DIOL, PHOSPHATE ION
Authors:Neumann, P, Ficner, R.
Deposit date:2012-09-19
Release date:2012-10-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Crystal Structures of Physcomitrella patens AOC1 and AOC2: Insights into the Enzyme Mechanism and Differences in Substrate Specificity.
Plant Physiol., 160, 2012
8OMR
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BU of 8omr by Molmil
Human tRNA guanine transglycosylase (TGT) bound to tRNAAsp
Descriptor: 9-DEAZAGUANINE, Queuine tRNA-ribosyltransferase accessory subunit 2, Queuine tRNA-ribosyltransferase catalytic subunit 1, ...
Authors:Sievers, K, Neumann, P, Susac, L, Trowitzsch, S, Tampe, R, Ficner, R.
Deposit date:2023-03-31
Release date:2023-12-20
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural and functional insights into tRNA recognition by human tRNA guanine transglycosylase.
Structure, 32, 2024
8OHL
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BU of 8ohl by Molmil
PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry H09
Descriptor: (2~{R})-2-fluoranyl-2-(4-fluoranyl-1,2,4$l^{4}-triazacyclopenta-2,4-dien-1-yl)-1-phenyl-ethanone, Cyclic di-AMP synthase CdaA, MAGNESIUM ION
Authors:Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
Deposit date:2023-03-21
Release date:2024-04-03
Method:X-RAY DIFFRACTION (1.29 Å)
Cite:PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry H09
To Be Published
4ZEM
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BU of 4zem by Molmil
Crystal structure of eIF2B beta from Chaetomium thermophilum
Descriptor: Translation initiation factor eIF2b-like protein,Translation initiation factor eIF2b-like protein
Authors:Kuhle, B, Ficner, R.
Deposit date:2015-04-20
Release date:2015-09-30
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Architecture of the eIF2B regulatory subcomplex and its implications for the regulation of guanine nucleotide exchange on eIF2.
Nucleic Acids Res., 43, 2015
4ZEO
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BU of 4zeo by Molmil
Crystal structure of eIF2B delta from Chaetomium thermophilum
Descriptor: Translation initiation factor eif-2b-like protein
Authors:Kuhle, B, Ficner, R.
Deposit date:2015-04-20
Release date:2015-09-30
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Architecture of the eIF2B regulatory subcomplex and its implications for the regulation of guanine nucleotide exchange on eIF2.
Nucleic Acids Res., 43, 2015
6HVN
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BU of 6hvn by Molmil
CdaA-APO Y187A Mutant
Descriptor: CHLORIDE ION, Diadenylate cyclase, beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose
Authors:Heidemann, J.L, Neumann, P, Ficner, R.
Deposit date:2018-10-11
Release date:2019-06-05
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.234 Å)
Cite:Crystal structures of the c-di-AMP-synthesizing enzyme CdaA.
J.Biol.Chem., 294, 2019
6HVM
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BU of 6hvm by Molmil
Structural characterization of CdaA-APO
Descriptor: CHLORIDE ION, Diadenylate cyclase, beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose
Authors:Heidemann, J.L, Neumann, P, Ficner, R.
Deposit date:2018-10-11
Release date:2019-06-05
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of the c-di-AMP-synthesizing enzyme CdaA.
J.Biol.Chem., 294, 2019
6HVL
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BU of 6hvl by Molmil
CdaA complex with c-di-AMP and AMP
Descriptor: (2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide, ADENOSINE MONOPHOSPHATE, COBALT (II) ION, ...
Authors:Heidemann, J.L, Neumann, P, Ficner, R.
Deposit date:2018-10-11
Release date:2019-06-05
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structures of the c-di-AMP-synthesizing enzyme CdaA.
J.Biol.Chem., 294, 2019
5DBO
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BU of 5dbo by Molmil
Crystal structure of the tetrameric eIF2B-beta2-delta2 complex from C. thermophilum
Descriptor: Translation initiation factor eIF2b-like protein,Translation initiation factor eIF2b-like protein, Translation initiation factor eif-2b-like protein
Authors:Kuhle, B, Ficner, R.
Deposit date:2015-08-21
Release date:2015-10-07
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3 Å)
Cite:Architecture of the eIF2B regulatory subcomplex and its implications for the regulation of guanine nucleotide exchange on eIF2.
Nucleic Acids Res., 43, 2015
8OF6
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BU of 8of6 by Molmil
Structure of YtoQ
Descriptor: SULFATE ION, YtoQ
Authors:Garbers, T.B, Neumann, P, Ficner, R.
Deposit date:2023-03-14
Release date:2024-03-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of YtoQ
To Be Published
3FGW
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BU of 3fgw by Molmil
One chain form of the 66.3 kDa protein
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, IODIDE ION, ...
Authors:Lakomek, K, Dickmanns, A, Ficner, R.
Deposit date:2008-12-08
Release date:2009-09-15
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Initial insight into the function of the lysosomal 66.3 kDa protein from mouse by means of X-ray crystallography
Bmc Struct.Biol., 9, 2009
4KXY
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BU of 4kxy by Molmil
Human transketolase in complex with ThDP analogue (R)-2-(1,2-dihydroxyethyl)-3-deaza-ThDP
Descriptor: 1,2-ETHANEDIOL, 2-{4-[(4-amino-2-methylpyrimidin-5-yl)methyl]-5-[(1R)-1,2-dihydroxyethyl]-3-methylthiophen-2-yl}ethyl trihydrogen diphosphate, CALCIUM ION, ...
Authors:Neumann, P, Luedtke, S, Erixon, K.M, Leeper, F, Kluger, R, Ficner, R, Tittmann, K.
Deposit date:2013-05-28
Release date:2013-08-21
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.26 Å)
Cite:Sub-angstrom-resolution crystallography reveals physical distortions that enhance reactivity of a covalent enzymatic intermediate.
Nat Chem, 5, 2013
4KXX
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BU of 4kxx by Molmil
Human transketolase in covalent complex with donor ketose D-sedoheptulose-7-phosphate
Descriptor: (2R,3R,4S,5R,6S)-2,3,4,5,6,7-hexahydroxyheptyl dihydrogen phosphate, 1,2-ETHANEDIOL, MAGNESIUM ION, ...
Authors:Neumann, P, Luedtke, S, Ficner, R, Tittmann, K.
Deposit date:2013-05-28
Release date:2013-08-21
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.03 Å)
Cite:Sub-angstrom-resolution crystallography reveals physical distortions that enhance reactivity of a covalent enzymatic intermediate.
Nat Chem, 5, 2013
4KXV
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BU of 4kxv by Molmil
Human transketolase in covalent complex with donor ketose D-xylulose-5-phosphate, crystal 1
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, D-XYLITOL-5-PHOSPHATE, ...
Authors:Neumann, P, Luedtke, S, Ficner, R, Tittmann, K.
Deposit date:2013-05-28
Release date:2013-08-21
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (0.97 Å)
Cite:Sub-angstrom-resolution crystallography reveals physical distortions that enhance reactivity of a covalent enzymatic intermediate.
Nat Chem, 5, 2013
4KXW
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BU of 4kxw by Molmil
Human transketolase in covalent complex with donor ketose D-xylulose-5-phosphate, crystal 2
Descriptor: 1,2-ETHANEDIOL, D-XYLITOL-5-PHOSPHATE, MAGNESIUM ION, ...
Authors:Neumann, P, Luedtke, S, Ficner, R, Tittmann, K.
Deposit date:2013-05-28
Release date:2013-08-21
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (0.97 Å)
Cite:Sub-angstrom-resolution crystallography reveals physical distortions that enhance reactivity of a covalent enzymatic intermediate.
Nat Chem, 5, 2013
4KXU
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BU of 4kxu by Molmil
Human transketolase in covalent complex with donor ketose D-fructose-6-phosphate
Descriptor: 1,2-ETHANEDIOL, D-SORBITOL-6-PHOSPHATE, MAGNESIUM ION, ...
Authors:Neumann, P, Luedtke, S, Ficner, R, Tittmann, K.
Deposit date:2013-05-28
Release date:2013-08-21
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (0.98 Å)
Cite:Sub-angstrom-resolution crystallography reveals physical distortions that enhance reactivity of a covalent enzymatic intermediate.
Nat Chem, 5, 2013
8OFH
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BU of 8ofh by Molmil
Streptococcus pneumoniae CdaA
Descriptor: Diadenylate cyclase
Authors:Garbers, T.B, Neumann, P, Ficner, R.
Deposit date:2023-03-15
Release date:2023-06-21
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Streptococcus pneumoniae CdaA
To Be Published
8OFG
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BU of 8ofg by Molmil
Streptococcus pneumoniae CdaA in complex with c-di-amp
Descriptor: ADENOSINE MONOPHOSPHATE, Diadenylate cyclase, GLU-ARG-LEU-LEU-GLY-GLY-TRP-LYS, ...
Authors:Garbers, T.B, Neumann, P, Ficner, R.
Deposit date:2023-03-15
Release date:2023-06-21
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Streptococcus pneumoniae CdaA in complex with c-di-amp
To Be Published
8OGN
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BU of 8ogn by Molmil
PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry A09
Descriptor: Cyclic di-AMP synthase CdaA, MAGNESIUM ION, [1,2]thiazolo[5,4-b]pyridin-3-amine
Authors:Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
Deposit date:2023-03-20
Release date:2024-03-27
Method:X-RAY DIFFRACTION (1.29 Å)
Cite:CdaA in complex with fragment F2X-Entry A09
To Be Published
8OGQ
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BU of 8ogq by Molmil
PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry B06
Descriptor: (1S)-1-(4-nitrophenyl)ethan-1-ol, Cyclic di-AMP synthase CdaA, MAGNESIUM ION
Authors:Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
Deposit date:2023-03-20
Release date:2024-03-27
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry B06
To Be Published
8OGU
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BU of 8ogu by Molmil
PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry C07
Descriptor: 3,4-dihydro-1~{H}-quinolin-2-one, Cyclic di-AMP synthase CdaA, MAGNESIUM ION
Authors:Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
Deposit date:2023-03-20
Release date:2024-03-27
Method:X-RAY DIFFRACTION (1.41 Å)
Cite:PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry C07
To Be Published
8OGM
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BU of 8ogm by Molmil
Crystal structure of CdaA from Bacillus subtilis
Descriptor: Cyclic di-AMP synthase CdaA
Authors:Garbers, T.B, Neumann, P, Weiss, M.S, Wollenhaupt, J, Ficner, R.
Deposit date:2023-03-20
Release date:2024-03-27
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Crystal structure of CdaA from Bacillus subtilis
To Be Published
8OGO
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BU of 8ogo by Molmil
PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry A12
Descriptor: 3-(propan-2-yl)-1,2,4-oxadiazol-5(4H)-one, Cyclic di-AMP synthase CdaA, MAGNESIUM ION
Authors:Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
Deposit date:2023-03-20
Release date:2024-03-27
Method:X-RAY DIFFRACTION (1.21 Å)
Cite:PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry A12
To Be Published
8OGR
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BU of 8ogr by Molmil
PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry B07
Descriptor: Cyclic di-AMP synthase CdaA, MAGNESIUM ION, N-[3-(diethylamino)phenyl]ethanamide
Authors:Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
Deposit date:2023-03-20
Release date:2024-03-27
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry B07
To Be Published

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