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PDB: 434 results

8I51
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BU of 8i51 by Molmil
Acyl-ACP synthetase structure bound to AMP-MC7
Descriptor: 7-methoxy-7-oxidanylidene-heptanoic acid, ADENOSINE MONOPHOSPHATE, Acyl-acyl carrier protein synthetase, ...
Authors:Huang, H, Wang, C, Chang, S, Cui, T, Xu, Y, Zhang, H, Zhou, C, Zhang, X, Feng, Y.
Deposit date:2023-01-21
Release date:2024-01-24
Last modified:2024-04-03
Method:ELECTRON MICROSCOPY (2.76 Å)
Cite:Acyl-ACP synthetase structure bound to AMP-MC7
To Be Published
8HZX
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BU of 8hzx by Molmil
Acyl-ACP synthetase structure-2
Descriptor: Acyl-acyl carrier protein synthetase
Authors:Huang, H, Wang, C, Chang, S, Cui, T, Xu, Y, Zhang, H, Zhou, C, Zhang, X, Feng, Y.
Deposit date:2023-01-09
Release date:2024-01-24
Last modified:2024-04-03
Method:ELECTRON MICROSCOPY (2.68 Å)
Cite:Acyl-ACP synthetase structure-2
To Be Published
8I49
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BU of 8i49 by Molmil
Acyl-ACP synthetase structure bound to ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Acyl-acyl carrier protein synthetase
Authors:Huang, H, Wang, C, Chang, S, Cui, T, Xu, Y, Zhang, H, Zhou, C, Zhang, X, Feng, Y.
Deposit date:2023-01-18
Release date:2024-01-24
Last modified:2024-04-03
Method:ELECTRON MICROSCOPY (2.41 Å)
Cite:Acyl-ACP synthetase structure bound to ATP.
To Be Published
5HA8
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BU of 5ha8 by Molmil
Structure of a cysteine hydrolase
Descriptor: Isochorismatase
Authors:Gao, S, Feng, Y.
Deposit date:2015-12-30
Release date:2017-01-18
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.054 Å)
Cite:Structure of a cysteine hydrolase
To Be Published
8I24
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BU of 8i24 by Molmil
Clostridium thermocellum RNA polymerase transcription open complex with SigI6 and its promoter
Descriptor: DNA (80-mer), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
Authors:Li, J, Zhang, H, Li, D, Feng, Y, Zhu, P.
Deposit date:2023-01-13
Release date:2023-10-11
Last modified:2023-11-01
Method:ELECTRON MICROSCOPY (3.36 Å)
Cite:Structure of the transcription open complex of distinct sigma I factors.
Nat Commun, 14, 2023
8I23
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BU of 8i23 by Molmil
Clostridium thermocellum RNA polymerase transcription open complex with SigI1 and its promoter
Descriptor: DNA (80-mer), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
Authors:Li, J, Zhang, H, Li, D, Feng, Y, Zhu, P.
Deposit date:2023-01-13
Release date:2023-10-11
Last modified:2023-11-01
Method:ELECTRON MICROSCOPY (3.03 Å)
Cite:Structure of the transcription open complex of distinct sigma I factors.
Nat Commun, 14, 2023
7ELN
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BU of 7eln by Molmil
Structure of Csy-AcrIF24-dsDNA
Descriptor: 54-MER DNA, AcrIF24, CRISPR type I-F/YPEST-associated protein Csy2, ...
Authors:Zhang, L, Feng, Y.
Deposit date:2021-04-12
Release date:2022-04-20
Last modified:2022-04-27
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Insights into the inhibition of type I-F CRISPR-Cas system by a multifunctional anti-CRISPR protein AcrIF24.
Nat Commun, 13, 2022
4MYD
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BU of 4myd by Molmil
1.37 Angstrom Crystal Structure of E. Coli 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase (MenH) in complex with SHCHC
Descriptor: 2-(3-CARBOXYPROPIONYL)-6-HYDROXY-CYCLOHEXA-2,4-DIENE CARBOXYLIC ACID, 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase
Authors:Sun, Y, Yin, S, Feng, Y, Li, J, Zhou, J, Liu, C, Zhu, G, Guo, Z.
Deposit date:2013-09-27
Release date:2014-04-23
Last modified:2022-08-24
Method:X-RAY DIFFRACTION (1.374 Å)
Cite:Molecular basis of the general base catalysis of an alpha / beta-hydrolase catalytic triad.
J.Biol.Chem., 289, 2014
4MXD
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BU of 4mxd by Molmil
1.45 angstronm crystal structure of E.coli 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase (MenH)
Descriptor: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Sun, Y, Yin, S, Feng, Y, Li, J, Zhou, J, Liu, C, Zhu, G, Guo, Z.
Deposit date:2013-09-26
Release date:2014-04-23
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Molecular basis of the general base catalysis of an alpha / beta-hydrolase catalytic triad.
J.Biol.Chem., 289, 2014
6KG3
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BU of 6kg3 by Molmil
Crystal structure of Nicotinic acid mononucleotide adenylyltransferase mutant P22K/Y84V/Y118D/C132Q/W176F from Escherichia coli
Descriptor: Probable nicotinate-nucleotide adenylyltransferase
Authors:Xue, S, Zhao, Z, Wang, X, Feng, Y.
Deposit date:2019-07-10
Release date:2020-07-15
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.08 Å)
Cite:Crystal structure of Nicotinic acid mononucleotide adenylyltransferase mutant P22K/Y84V/Y118D/C132Q/W176F from Escherichia coli
To Be Published
4I7B
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BU of 4i7b by Molmil
Siah1 bound to synthetic peptide (ACE)KLRPV(ABA)MVRPTVR
Descriptor: E3 ubiquitin-protein ligase SIAH1, Protein phyllopod, ZINC ION
Authors:Santelli, E, Stebbins, J.L, Feng, Y, De, S.K, Purves, A, Motamedchaboki, K, Wu, B, Ronai, Z.A, Liddington, R.C, Pellecchia, M.
Deposit date:2012-11-30
Release date:2013-08-14
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure-based design of covalent siah inhibitors.
Chem.Biol., 20, 2013
4I7C
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BU of 4i7c by Molmil
Siah1 mutant bound to synthetic peptide (ACE)KLRPV(23P)MVRPWVR
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, E3 ubiquitin-protein ligase SIAH1, Protein phyllopod, ...
Authors:Santelli, E, Stebbins, J.L, Feng, Y, De, S.K, Purves, A, Motamedchaboki, K, Wu, B, Ronai, Z.A, Liddington, R.C, Pellecchia, M.
Deposit date:2012-11-30
Release date:2013-08-14
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure-based design of covalent siah inhibitors.
Chem.Biol., 20, 2013
4I7D
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BU of 4i7d by Molmil
Siah1 bound to synthetic peptide (ACE)KLRPVAMVRP(PRK)VR
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, E3 ubiquitin-protein ligase SIAH1, Protein phyllopod, ...
Authors:Santelli, E, Stebbins, J.L, Feng, Y, De, S.K, Purves, A, Motamedchaboki, K, Wu, B, Ronai, Z.A, Liddington, R.C, Pellecchia, M.
Deposit date:2012-11-30
Release date:2013-08-14
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure-based design of covalent siah inhibitors.
Chem.Biol., 20, 2013
5GWE
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BU of 5gwe by Molmil
cytochrome P450 CREJ
Descriptor: (4-methylphenyl) dihydrogen phosphate, Cytochrome P450, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Dong, S, liu, X, Wang, X, Feng, Y.
Deposit date:2016-09-11
Release date:2017-07-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Selective oxidation of aliphatic C-H bonds in alkylphenols by a chemomimetic biocatalytic system
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5ZMU
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BU of 5zmu by Molmil
Crystal structure of a cis-epoxysuccinate hydrolase producing D(-)-tartaric acids
Descriptor: Cis-epoxysuccinate hydrolase, ZINC ION
Authors:Dong, S, Liu, X, Wang, X, Feng, Y.
Deposit date:2018-04-06
Release date:2018-08-08
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural insight into the catalytic mechanism of a cis-epoxysuccinate hydrolase producing enantiomerically pure d(-)-tartaric acid.
Chem. Commun. (Camb.), 54, 2018
4L4P
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BU of 4l4p by Molmil
the mutant(E139A) structure in complex with xylotriose
Descriptor: Endo-1,4-beta-xylanase, beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose
Authors:An, J, Feng, Y, Wu, G.
Deposit date:2013-06-08
Release date:2014-05-07
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of CbXyn10B from Caldicellulosiruptor bescii and its mutant(E139A) in complex with xylotriose
To be Published
4L4O
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BU of 4l4o by Molmil
The crystal structure of CbXyn10B in native form
Descriptor: Endo-1,4-beta-xylanase, TRIS-HYDROXYMETHYL-METHYL-AMMONIUM
Authors:An, J, Feng, Y, Wu, G.
Deposit date:2013-06-08
Release date:2014-05-07
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal structure of CbXyn10B from Caldicellulosiruptor bescii and its mutant(E139A) in complex with xylotriose
To be Published
2LCC
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BU of 2lcc by Molmil
Solution structure of RBBP1 chromobarrel domain
Descriptor: AT-rich interactive domain-containing protein 4A
Authors:Gong, W, Feng, Y.
Deposit date:2011-04-28
Release date:2012-02-08
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural insight into recognition of methylated histone tails by retinoblastoma-binding protein 1.
J.Biol.Chem., 2012
2M00
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BU of 2m00 by Molmil
Solution structure of staphylococcal nuclease E43S mutant in the presence of ssDNA and Cd2+
Descriptor: Thermonuclease
Authors:Xie, T, Feng, Y, Shan, L, Wang, J.
Deposit date:2012-10-14
Release date:2013-03-06
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Modeling of the [E43S]SNase-ssDNA-Cd(2+) complex: Structural insight into the action of nuclease on ssDNA.
Arch.Biochem.Biophys., 532, 2013
2MAM
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BU of 2mam by Molmil
Solution structure of the interdigitated double Tudor domain of RBBP1
Descriptor: AT-rich interactive domain-containing protein 4A
Authors:Gong, W, Feng, Y.
Deposit date:2013-07-15
Release date:2014-01-15
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Retinoblastoma-binding protein 1 has an interdigitated double Tudor domain with DNA binding activity.
J.Biol.Chem., 289, 2014
2MBY
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BU of 2mby by Molmil
NMR Structure of Rrp7 C-terminal Domain
Descriptor: Ribosomal RNA-processing protein 7
Authors:Lin, J, Feng, Y, Ye, K.
Deposit date:2013-08-08
Release date:2013-09-25
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:An RNA-Binding Complex Involved in Ribosome Biogenesis Contains a Protein with Homology to tRNA CCA-Adding Enzyme.
Plos Biol., 11, 2013
2N51
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BU of 2n51 by Molmil
NMR structure of the C-terminal region of human eukaryotic elongation factor 1B
Descriptor: Elongation factor 1-delta
Authors:Wu, H, Feng, Y.
Deposit date:2015-07-02
Release date:2016-05-18
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The C-terminal region of human eukaryotic elongation factor 1B delta.
J.Biomol.Nmr, 64, 2016
2MVN
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BU of 2mvn by Molmil
Solution structure of eEF1Bdelta CAR domain in TCTP-bound state
Descriptor: Elongation factor 1-delta
Authors:Wu, H, Feng, Y.
Deposit date:2014-10-09
Release date:2015-02-04
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Evolutionarily Conserved Binding of Translationally Controlled Tumor Protein to Eukaryotic Elongation Factor 1B.
J.Biol.Chem., 290, 2015
2MVM
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BU of 2mvm by Molmil
Solution structure of eEF1Bdelta CAR domain
Descriptor: Elongation factor 1-delta
Authors:Wu, H, Feng, Y.
Deposit date:2014-10-09
Release date:2015-02-04
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Evolutionarily Conserved Binding of Translationally Controlled Tumor Protein to Eukaryotic Elongation Factor 1B.
J.Biol.Chem., 290, 2015
7D1O
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BU of 7d1o by Molmil
Crystal structure of SARS-Cov-2 main protease with narlaprevir
Descriptor: (1R,2S,5S)-3-[N-({1-[(tert-butylsulfonyl)methyl]cyclohexyl}carbamoyl)-3-methyl-L-valyl]-N-{(1S)-1-[(1R)-2-(cyclopropylamino)-1-hydroxy-2-oxoethyl]pentyl}-6,6-dimethyl-3-azabicyclo[3.1.0]hexane-2-carboxamide, 3C-like proteinase
Authors:Fu, L.F, Feng, Y, Qi, J.X.
Deposit date:2020-09-15
Release date:2020-09-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Structural basis for the inhibition of the SARS-CoV-2 main protease by the anti-HCV drug narlaprevir.
Signal Transduct Target Ther, 6, 2021

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