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PDB: 98 results

1P9C
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BU of 1p9c by Molmil
NMR solution structure of the C-terminal ubiquitin-interacting motif of the proteasome subunit S5a
Descriptor: 26S proteasome non-ATPase regulatory subunit 4
Authors:Mueller, T.D, Feigon, J.
Deposit date:2003-05-10
Release date:2003-10-07
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural determinants for the binding of ubiquitin-like domains to the proteasome.
Embo J., 22, 2003
1P3X
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BU of 1p3x by Molmil
INTRAMOLECULAR DNA TRIPLEX WITH 1-PROPYNYL DEOXYURIDINE IN THE THIRD STRAND, NMR, 10 STRUCTURES
Descriptor: DNA (5'-D(*(PDU)P*CP*(PDU)P*(DCM)P*(PDU)P*CP*(PDU)P*(PDU))-3'), DNA (5'-D(*AP*GP*AP*GP*AP*GP*AP*A)-3'), DNA (5'-D(*TP*TP*CP*TP*CP*TP*CP*T)-3')
Authors:Phipps, A.K, Tarkoy, M, Schultze, P, Feigon, J.
Deposit date:1998-02-05
Release date:1998-05-06
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structure of an intramolecular DNA triplex containing 5-(1-propynyl)-2'-deoxyuridine residues in the third strand.
Biochemistry, 37, 1998
1RAW
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BU of 1raw by Molmil
ATP BINDING RNA APTAMER IN COMPLEX WITH AMP, NMR, 10 STRUCTURES
Descriptor: ADENOSINE MONOPHOSPHATE, RNA APTAMER
Authors:Dieckmann, T, Feigon, J.
Deposit date:1996-07-17
Release date:1997-01-27
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution Structure of an ATP-Binding RNA Aptamer Reveals a Novel Fold
RNA, 2, 1996
1RVH
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BU of 1rvh by Molmil
SOLUTION STRUCTURE OF THE DNA DODECAMER GCAAAATTTTGC
Descriptor: 5'-D(*GP*CP*AP*AP*AP*AP*TP*TP*TP*TP*GP*C)-3'
Authors:Stefl, R, Wu, H, Ravindranathan, S, Sklenar, V, Feigon, J.
Deposit date:2003-12-13
Release date:2004-02-10
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:DNA A-tract bending in three dimensions: Solving the dA4T4 vs. dT4A4 conundrum.
Proc.Natl.Acad.Sci.USA, 101, 2004
1R3X
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BU of 1r3x by Molmil
INTRAMOLECULAR DNA TRIPLEX WITH RNA THIRD STRAND, NMR, 10 STRUCTURES
Descriptor: DNA (5'-D(*AP*GP*AP*GP*AP*GP*AP*A)-3'), DNA (5'-D(*TP*TP*CP*TP*CP*TP*CP*T)-3'), RNA (5'-R(*UP*CP*UP*CP*UP*CP*UP*U)-3')
Authors:Gotfredsen, C.H, Schultze, P, Feigon, J.
Deposit date:1998-02-06
Release date:1998-05-20
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution Structure of an Intramolecular Pyrimidine-Purine-Pyrimidine Triplex Containing an RNA Third Strand
J.Am.Chem.Soc., 120, 1998
1RKJ
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BU of 1rkj by Molmil
Solution structure of the complex formed by the two N-terminal RNA-binding domains of nucleolin and a pre-rRNA target
Descriptor: 5'-R(*GP*GP*AP*UP*GP*CP*CP*UP*CP*CP*CP*GP*AP*GP*UP*GP*CP*AP*UP*CP*C)-3', Nucleolin
Authors:Johansson, C, Finger, L.D, Trantirek, L, Mueller, T.D, Kim, S, Laird-Offringa, I.A, Feigon, J.
Deposit date:2003-11-21
Release date:2004-04-27
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of the complex formed by the two N-terminal RNA-binding domains of nucleolin and a pre-rRNA target.
J.Mol.Biol., 337, 2004
1RVI
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BU of 1rvi by Molmil
SOLUTION STRUCTURE OF THE DNA DODECAMER CGTTTTAAAACG
Descriptor: 5'-D(*CP*GP*TP*TP*TP*TP*AP*AP*AP*AP*CP*G)-3'
Authors:Stefl, R, Wu, H, Ravindranathan, S, Sklenar, V, Feigon, J.
Deposit date:2003-12-13
Release date:2004-02-10
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:DNA A-tract bending in three dimensions: Solving the dA4T4 vs. dT4A4 conundrum.
Proc.Natl.Acad.Sci.USA, 101, 2004
1T4L
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BU of 1t4l by Molmil
Solution structure of double-stranded RNA binding domain of S. cerevisiae RNase III (Rnt1p) in complex with the 5' terminal RNA hairpin of snR47 precursor
Descriptor: 5' terminal hairpin of snR47 precursor, Ribonuclease III
Authors:Wu, H, Henras, A, Chanfreau, G, Feigon, J.
Deposit date:2004-04-29
Release date:2004-06-01
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural basis for recognition of the AGNN tetraloop RNA fold by the double-stranded RNA-binding domain of Rnt1p RNase III.
Proc.Natl.Acad.Sci.USA, 101, 2004
1TLR
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BU of 1tlr by Molmil
SOLUTION STRUCTURE OF TETRALOOP RECEPTOR RNA, NMR, 20 STRUCTURES
Descriptor: RNA TETRALOOP RECEPTOR (5'-R(GGCCUAAGACUUCGGUUAUGGCC)-3')
Authors:Butcher, S.E, Dieckmann, T, Feigon, J.
Deposit date:1997-09-11
Release date:1997-11-12
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of a GAAA tetraloop receptor RNA.
EMBO J., 16, 1997
2LSL
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BU of 2lsl by Molmil
Solution structure of the C-terminal domain of Tetrahymena telomerase protein p65
Descriptor: Telomerase associated protein p65
Authors:Singh, M, Wang, Z, Koo, B, Patel, A, Cascio, D, Collins, K, Feigon, J.
Deposit date:2012-05-01
Release date:2012-06-20
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural Basis for Telomerase RNA Recognition and RNP Assembly by the Holoenzyme La Family Protein p65.
Mol.Cell, 47, 2012
2L1V
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BU of 2l1v by Molmil
Solution structure of a preQ1 riboswitch (Class I) aptamer bound to preQ1
Descriptor: 36-MER, 7-DEAZA-7-AMINOMETHYL-GUANINE
Authors:Kang, M, Zhang, Q, Feigon, J.
Deposit date:2010-08-06
Release date:2010-09-01
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural Insights into Riboswitch Control of the Biosynthesis of Queuosine, a Modified Nucleotide Found in the Anticodon of tRNA
Mol.Cell, 33, 2009
2L3E
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Solution structure of P2a-J2a/b-P2b of human telomerase RNA
Descriptor: 35-MER
Authors:Zhang, Q, Kim, N, Peterson, R.D, Wang, Z, Feigon, J.
Deposit date:2010-09-13
Release date:2010-11-17
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Inaugural Article: Structurally conserved five nucleotide bulge determines the overall topology of the core domain of human telomerase RNA.
Proc.Natl.Acad.Sci.USA, 107, 2010
2M8K
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BU of 2m8k by Molmil
A pyrimidine motif triple helix in the Kluyveromyces lactis telomerase RNA pseudoknot is essential for function in vivo
Descriptor: RNA (48-MER)
Authors:Cash, D.D, Cohen, O, Kim, N, Shefer, K, Brown, Y, Ulyanov, N.B, Tzfati, Y, Feigon, J.
Deposit date:2013-05-22
Release date:2013-06-19
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Pyrimidine motif triple helix in the Kluyveromyces lactis telomerase RNA pseudoknot is essential for function in vivo.
Proc.Natl.Acad.Sci.USA, 110, 2013
2MHI
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BU of 2mhi by Molmil
Solution structure of the CR4/5 domain of medaka telomerase RNA
Descriptor: Medaka telomerase RNA
Authors:Kim, N, Zhang, Q, Feigon, J.
Deposit date:2013-11-23
Release date:2013-12-25
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure and sequence elements of the CR4/5 domain of medaka telomerase RNA important for telomerase function.
Nucleic Acids Res., 42, 2014
2MIY
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BU of 2miy by Molmil
Solution NMR structure of a preQ1 Class II riboswitch from Streptococcus pneumoniae
Descriptor: 7-DEAZA-7-AMINOMETHYL-GUANINE, RNA_(59-MER)
Authors:Kang, M, Eichhorn, C.D, Feigon, J.
Deposit date:2013-12-20
Release date:2014-01-29
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural determinants for ligand capture by a class II preQ1 riboswitch.
Proc.Natl.Acad.Sci.USA, 111, 2014
2KYE
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BU of 2kye by Molmil
Solution structure of the pseudouridine modified P6.1 hairpin of human telomerase RNA
Descriptor: RNA (5'-R(*GP*AP*GP*AP*GP*(PSU)P*(PSU)P*GP*GP*GP*CP*(PSU)P*CP*(PSU)P*C)-3')
Authors:Kim, N.-K, Theimer, C.A, Mitchell, J.R, Collins, K, Feigon, J.
Deposit date:2010-05-25
Release date:2010-06-30
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Effect of pseudouridylation on the structure and activity of the catalytically essential P6.1 hairpin in human telomerase RNA.
Nucleic Acids Res., 38, 2010
2LBW
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BU of 2lbw by Molmil
Solution structure of the S. cerevisiae H/ACA RNP protein Nhp2p-S82W mutant
Descriptor: H/ACA ribonucleoprotein complex subunit 2
Authors:Koo, B, Park, C, Fernandez, C.F, Chim, N, Ding, Y, Chanfreau, G, Feigon, J.
Deposit date:2011-04-07
Release date:2011-07-06
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structure of H/ACA RNP Protein Nhp2p Reveals Cis/Trans Isomerization of a Conserved Proline at the RNA and Nop10 Binding Interface.
J.Mol.Biol., 411, 2011
2LUJ
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BU of 2luj by Molmil
Solution structure of a parallel-stranded oligoisoguanine DNA pentaplex formed by d(T(iG)4T) in the presence of Cs ions
Descriptor: DNA (5'-D(*TP*(IGU)P*(IGU)P*(IGU)P*(IGU)P*T)-3')
Authors:Kang, M, Heuberger, B, Chaput, J.C, Switzer, C, Feigon, J.
Deposit date:2012-06-14
Release date:2012-07-25
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution Structure of a Parallel-Stranded Oligoisoguanine DNA Pentaplex Formed by d(T(iG)4T) in the Presence of Cs(+) Ions.
Angew.Chem.Int.Ed.Engl., 51, 2012
2K95
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BU of 2k95 by Molmil
Solution structure of the wild-type P2B-P3 pseudoknot of human telomerase RNA
Descriptor: Telomerase RNA P2b-P3 pseudoknot
Authors:Kim, N.-K, Zhang, Q, Zhou, J, Theimer, C.A, Peterson, R.D, Feigon, J.
Deposit date:2008-09-29
Release date:2008-11-25
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution Structure and Dynamics of the Wild-type Pseudoknot of Human Telomerase RNA.
J.Mol.Biol., 384, 2008
2M22
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Solution structure of the helix II template boundary element from Tetrahymena telomerase RNA
Descriptor: 5'-R(*GP*GP*CP*AP*GP*AP*UP*CP*UP*GP*UP*AP*AP*UP*AP*GP*AP*AP*CP*UP*GP*CP*C)-3'
Authors:Cash, D.D, Richards, R.J, Theimer, C.A, Finger, D.L, Feigon, J.
Deposit date:2012-12-11
Release date:2013-03-20
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structure of the helix II template boundary element from Tetrahymena telomerase RNA
Nucleic Acids Res., 34, 2006
2M21
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Solution structure of the Tetrahymena telomerase RNA stem IV terminal loop
Descriptor: 5'-R(*GP*GP*CP*GP*AP*UP*AP*CP*AP*CP*UP*AP*UP*UP*UP*AP*UP*CP*GP*CP*C)-3'
Authors:Cash, D.D, Richards, R.J, Wu, H, Trantirek, L, O'Connor, C.M, Feigon, J, Collins, K.
Deposit date:2012-12-11
Release date:2013-03-20
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural study of elements of Tetrahymena telomerase RNA stem-loop IV domain important for function.
Rna, 12, 2006
2MNW
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BU of 2mnw by Molmil
Solution structure of the P22S mutant of N-terminal CS domain of human Shq1
Descriptor: Protein SHQ1 homolog
Authors:Singh, M, Wang, Z, Cascio, D, Feigon, J.
Deposit date:2014-04-16
Release date:2015-01-14
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure and Interactions of the CS Domain of Human H/ACA RNP Assembly Protein Shq1.
J.Mol.Biol., 427, 2015
2LBX
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BU of 2lbx by Molmil
Solution structure of the S. cerevisiae H/ACA RNP protein Nhp2p
Descriptor: H/ACA ribonucleoprotein complex subunit 2
Authors:Koo, B, Park, C, Fernandez, C.F, Chim, N, Ding, Y, Chanfreau, G, Feigon, J.
Deposit date:2011-04-07
Release date:2011-07-06
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure of H/ACA RNP Protein Nhp2p Reveals Cis/Trans Isomerization of a Conserved Proline at the RNA and Nop10 Binding Interface.
J.Mol.Biol., 411, 2011
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