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PDB: 100 results

5DFA
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BU of 5dfa by Molmil
3D structure of the E323A catalytic mutant of Gan42B, a GH42 beta-galactosidase from G. stearothermophilus
Descriptor: Beta-galactosidase, GLYCEROL, ZINC ION
Authors:Solomon, H.V, Tabachnikov, O, Lansky, S, Feinberg, H, Govada, L, Chayen, N.E, Shoham, Y, Shoham, G.
Deposit date:2015-08-26
Release date:2015-12-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure-function relationships in Gan42B, an intracellular GH42 beta-galactosidase from Geobacillus stearothermophilus.
Acta Crystallogr.,Sect.D, 71, 2015
3IFN
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BU of 3ifn by Molmil
X-ray structure of amyloid beta peptide:antibody (Abeta1-40:12A11) complex
Descriptor: 12A11 FAB antibody heavy chain, 12A11 FAB antibody light chain, Amyloid beta A4 protein
Authors:Weis, W.I, Feinberg, H, Basi, G.S, Schenk, D.
Deposit date:2009-07-24
Release date:2009-11-17
Last modified:2013-06-19
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural correlates of antibodies associated with acute reversal of amyloid beta-related behavioral deficits in a mouse model of Alzheimer disease.
J.Biol.Chem., 285, 2010
2IT6
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BU of 2it6 by Molmil
Crystal Structure of DCSIGN-CRD with man2
Descriptor: CALCIUM ION, CD209 antigen, alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose
Authors:Weis, W.I, Feinberg, H, Castelli, R, Drickamer, K, Seeberger, P.H.
Deposit date:2006-10-19
Release date:2006-12-05
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Multiple modes of binding enhance the affinity of DC-SIGN for high mannose N-linked glycans found on viral glycoproteins.
J.Biol.Chem., 282, 2007
2IT5
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BU of 2it5 by Molmil
Crystal Structure of DCSIGN-CRD with man6
Descriptor: CALCIUM ION, CD209 antigen, DCSIGN-CRD, ...
Authors:Weis, W.I, Feinberg, H, Castelli, R, Drickamer, K, Seeberger, P.H.
Deposit date:2006-10-19
Release date:2006-12-05
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Multiple modes of binding enhance the affinity of DC-SIGN for high mannose N-linked glycans found on viral glycoproteins.
J.Biol.Chem., 282, 2007
4OIF
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BU of 4oif by Molmil
3D structure of Gan42B, a GH42 beta-galactosidase from G.
Descriptor: Beta-galactosidase, GLYCEROL, ZINC ION
Authors:Solomon, H.V, Tabachnikov, O, Feinberg, H, Shoham, Y, Shoham, G.
Deposit date:2014-01-19
Release date:2015-02-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.448 Å)
Cite:Crystallization and preliminary crystallographic analysis of GanB, a GH42 intracellular beta-galactosidase from Geobacillus stearothermophilus.
Acta Crystallogr.,Sect.F, 69, 2013
3IFL
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BU of 3ifl by Molmil
X-ray structure of amyloid beta peptide:antibody (Abeta1-7:12A11) complex
Descriptor: 12A11 FAB antibody heavy chain, 12A11 FAB antibody light chain, Amyloid beta A4 protein
Authors:Weis, W.I, Feinberg, H, Basi, G.S, Schenk, D.
Deposit date:2009-07-24
Release date:2009-11-17
Last modified:2013-06-19
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural correlates of antibodies associated with acute reversal of amyloid beta-related behavioral deficits in a mouse model of Alzheimer disease.
J.Biol.Chem., 285, 2010
6HC7
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BU of 6hc7 by Molmil
The crystal structure of BSAP, a zinc aminopeptidase from Bacillus subtilis (medium resolution)
Descriptor: ACETATE ION, Aminopeptidase Y (Arg Lys Leu preference), CHLORIDE ION, ...
Authors:Alhadeff, R, Lansky, S, Feinberg, H, Shoham, Y, Shoham, G.
Deposit date:2018-08-14
Release date:2019-08-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The crystal structure of BSAP, a zinc aminopeptidase from Bacillus subtilis (medium resolution)
To Be Published
4ZET
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BU of 4zet by Molmil
Blood dendritic cell antigen 2 (BDCA-2) complexed with GalGlcNAcMan
Descriptor: C-type lectin domain family 4 member C, CALCIUM ION, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose
Authors:Jegouzo, S.A.F, Feinberg, H, Dungarwalla, T, Drickamer, K, Weis, W.I, Taylor, M.E.
Deposit date:2015-04-20
Release date:2015-05-27
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:A Novel Mechanism for Binding of Galactose-terminated Glycans by the C-type Carbohydrate Recognition Domain in Blood Dendritic Cell Antigen 2.
J.Biol.Chem., 290, 2015
1Q3C
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BU of 1q3c by Molmil
Crystal structure of the DNA repair enzyme endonuclease-VIII (Nei) from E. coli: The E2A mutant at 2.3 resolution.
Descriptor: Endonuclease VIII, GLYCEROL, MAGNESIUM ION, ...
Authors:Golan, G, Zharkov, D.O, Feinberg, H, Fernandes, A.S, Zaika, E.I, Kycia, J.H, Grollman, A.P, Shoham, G.
Deposit date:2003-07-29
Release date:2004-08-03
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of the uncomplexed DNA repair enzyme endonuclease VIII indicates significant interdomain flexibility.
Nucleic Acids Res., 33, 2005
6PWS
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BU of 6pws by Molmil
Crystal structure of the cow C-type carbohydrate-recognition domain of CD23 in the presence of alpha-methyl mannoside
Descriptor: CALCIUM ION, Fc fragment of IgE receptor II, methyl alpha-D-mannopyranoside
Authors:Weis, W.I, Feinberg, H.
Deposit date:2019-07-23
Release date:2019-09-11
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1 Å)
Cite:CD23 is a glycan-binding receptor in some mammalian species.
J.Biol.Chem., 294, 2019
6PWT
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BU of 6pwt by Molmil
Crystal structure of the cow C-type carbohydrate-recognition domain of CD23 in the presence of GlcNAc2Man3 oligosaccharide
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose, CALCIUM ION, Fc fragment of IgE receptor II
Authors:Weis, W.I, Feinberg, H.
Deposit date:2019-07-23
Release date:2019-09-11
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.701 Å)
Cite:CD23 is a glycan-binding receptor in some mammalian species.
J.Biol.Chem., 294, 2019
6PWR
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BU of 6pwr by Molmil
Crystal structure of the cow C-type carbohydrate-recognition domain of CD23 in the presence of GlcNAc-beta1-2-Man
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose, CALCIUM ION, Fc fragment of IgE receptor II
Authors:Weis, W.I, Feinberg, H.
Deposit date:2019-07-23
Release date:2019-09-11
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:CD23 is a glycan-binding receptor in some mammalian species.
J.Biol.Chem., 294, 2019
3MMD
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BU of 3mmd by Molmil
Crystal structure of the W241A mutant of xylanase from Geobacillus stearothermophilus T-6 (XT6) complexed with hydrolyzed xylopentaose
Descriptor: CHLORIDE ION, Endo-1,4-beta-xylanase, SODIUM ION, ...
Authors:Solomon, V, Zolotnitsky, G, Feinberg, H, Tabachnikov, O, Shoham, Y, Shoham, G.
Deposit date:2010-04-19
Release date:2011-04-27
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural-based rational mutagenesis of xylanases from G.stearothermophilus
TO BE PUBLISHED
1ARM
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BU of 1arm by Molmil
CARBOXYPEPTIDASE A WITH ZN REPLACED BY HG
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, COPPER (II) ION, HG-CARBOXYPEPTIDASE A=ALPHA= (COX), ...
Authors:Greenblatt, H.M, Feinberg, H, Tucker, P.A, Shoham, G.
Deposit date:1994-11-22
Release date:1996-08-17
Last modified:2019-08-14
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Carboxypeptidase A: native, zinc-removed and mercury-replaced forms.
Acta Crystallogr.,Sect.D, 54, 1998
1Q39
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BU of 1q39 by Molmil
Crystal structure of the DNA repair enzyme endonuclease-VIII (Nei) from E. coli: The WT enzyme at 2.8 resolution.
Descriptor: CALCIUM ION, Endonuclease VIII, ZINC ION
Authors:Golan, G, Zharkov, D.O, Feinberg, H, Fernandes, A.S, Zaika, E.I, Kycia, J.H, Grollman, A.P, Shoham, G.
Deposit date:2003-07-29
Release date:2004-08-03
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of the uncomplexed DNA repair enzyme endonuclease VIII indicates significant interdomain flexibility.
Nucleic Acids Res., 33, 2005
7JUD
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BU of 7jud by Molmil
C-type carbohydrate-recognition domain 4 of the mannose receptor complexed with methyl-mannoside
Descriptor: CALCIUM ION, Macrophage mannose receptor 1, methyl alpha-D-mannopyranoside
Authors:Weis, W.I, Feinberg, H.
Deposit date:2020-08-19
Release date:2021-02-03
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural analysis of carbohydrate binding by the macrophage mannose receptor CD206.
J.Biol.Chem., 296, 2021
1Q3B
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BU of 1q3b by Molmil
Crystal structure of the DNA repair enzyme endonuclease-VIII (Nei) from E. coli: The R252A mutant at 2.05 resolution.
Descriptor: Endonuclease VIII, GLYCEROL, MAGNESIUM ION, ...
Authors:Golan, G, Zharkov, D.O, Feinberg, H, Fernandes, A.S, Zaika, E.I, Kycia, J.H, Grollman, A.P, Shoham, G.
Deposit date:2003-07-29
Release date:2004-08-03
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structure of the uncomplexed DNA repair enzyme endonuclease VIII indicates significant interdomain flexibility.
Nucleic Acids Res., 33, 2005
7JUF
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BU of 7juf by Molmil
C-type carbohydrate-recognition domain 4 of the mannose receptor complexed with Man-alpha1-2Man
Descriptor: CALCIUM ION, DI(HYDROXYETHYL)ETHER, Macrophage mannose receptor 1, ...
Authors:Weis, W.I, Feinberg, H.
Deposit date:2020-08-19
Release date:2021-02-03
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural analysis of carbohydrate binding by the macrophage mannose receptor CD206.
J.Biol.Chem., 296, 2021
1KWX
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BU of 1kwx by Molmil
Rat mannose protein A complexed with b-Me-Fuc.
Descriptor: CALCIUM ION, CHLORIDE ION, MANNOSE-BINDING PROTEIN A, ...
Authors:Ng, K.K, Kolatkar, A.R, Park-Snyder, S, Feinberg, H, Clark, D.A, Drickamer, K, Weis, W.I.
Deposit date:2002-01-30
Release date:2002-07-05
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Orientation of bound ligands in mannose-binding proteins. Implications for multivalent ligand recognition.
J.Biol.Chem., 277, 2002
1KWU
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BU of 1kwu by Molmil
Rat mannose binding protein A complexed with a-Me-Man
Descriptor: CALCIUM ION, CHLORIDE ION, MANNOSE-BINDING PROTEIN A, ...
Authors:Ng, K.K, Kolatkar, A.R, Park-Snyder, S, Feinberg, H, Clark, D.A, Drickamer, K, Weis, W.I.
Deposit date:2002-01-30
Release date:2002-07-05
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Orientation of bound ligands in mannose-binding proteins. Implications for multivalent ligand recognition.
J.Biol.Chem., 277, 2002
1KWW
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BU of 1kww by Molmil
Rat mannose protein A complexed with a-Me-Fuc.
Descriptor: CALCIUM ION, CHLORIDE ION, MANNOSE-BINDING PROTEIN A, ...
Authors:Ng, K.K, Kolatkar, A.R, Park-Snyder, S, Feinberg, H, Clark, D.A, Drickamer, K, Weis, W.I.
Deposit date:2002-01-30
Release date:2002-07-05
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Orientation of bound ligands in mannose-binding proteins. Implications for multivalent ligand recognition.
J.Biol.Chem., 277, 2002
1KX1
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BU of 1kx1 by Molmil
Rat mannose protein A complexed with Man6-GlcNAc2-Asn
Descriptor: CALCIUM ION, MANNOSE-BINDING PROTEIN A, alpha-D-mannopyranose, ...
Authors:Ng, K.K, Kolatkar, A.R, Park-Snyder, S, Feinberg, H, Clark, D.A, Drickamer, K, Weis, W.I.
Deposit date:2002-01-30
Release date:2002-07-05
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Orientation of bound ligands in mannose-binding proteins. Implications for multivalent ligand recognition.
J.Biol.Chem., 277, 2002
1KWY
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BU of 1kwy by Molmil
Rat mannose protein A complexed with man-a13-man.
Descriptor: CALCIUM ION, CHLORIDE ION, MANNOSE-BINDING PROTEIN A, ...
Authors:Ng, K.K, Kolatkar, A.R, Park-Snyder, S, Feinberg, H, Clark, D.A, Drickamer, K, Weis, W.I.
Deposit date:2002-01-30
Release date:2002-07-05
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Orientation of bound ligands in mannose-binding proteins. Implications for multivalent ligand recognition.
J.Biol.Chem., 277, 2002
1KWT
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BU of 1kwt by Molmil
Rat mannose binding protein A (native, MPD)
Descriptor: CALCIUM ION, CHLORIDE ION, MANNOSE-BINDING PROTEIN A
Authors:Ng, K.K.S, Kolatkar, A.R, Park-Snyder, S, Feinberg, H, Clark, D.A, Drickamer, K, Weis, W.I.
Deposit date:2002-01-30
Release date:2002-07-05
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Orientation of bound ligands in mannose-binding proteins. Implications for multivalent ligand recognition.
J.Biol.Chem., 277, 2002
1KZA
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BU of 1kza by Molmil
Complex of MBP-C and Man-a13-Man
Descriptor: CALCIUM ION, CHLORIDE ION, MANNOSE-BINDING PROTEIN C, ...
Authors:Ng, K.K, Kolatkar, A.R, Park-Snyder, S, Feinberg, H, Clark, D.A, Drickamer, K, Weis, W.I.
Deposit date:2002-02-06
Release date:2002-07-05
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Orientation of bound ligands in mannose-binding proteins. Implications for multivalent ligand recognition.
J.Biol.Chem., 277, 2002

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