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PDB: 393 results

6DW0
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BU of 6dw0 by Molmil
Cryo-EM structure of the benzodiazepine-sensitive alpha1beta1gamma2S tri-heteromeric GABAA receptor in complex with GABA (Whole map)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GAMMA-AMINO-BUTANOIC ACID, Gamma-aminobutyric acid receptor subunit alpha-1,Gamma-aminobutyric acid receptor subunit alpha-1, ...
Authors:Phulera, S, Zhu, H, Yu, J, Yoshioka, C, Gouaux, E.
Deposit date:2018-06-26
Release date:2018-08-08
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Cryo-EM structure of the benzodiazepine-sensitive alpha 1 beta 1 gamma 2S tri-heteromeric GABAAreceptor in complex with GABA.
Elife, 7, 2018
6QAO
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BU of 6qao by Molmil
Structure of human aldehyde dehydrogenase 9A1 in P21 space group
Descriptor: 4-trimethylaminobutyraldehyde dehydrogenase, DI(HYDROXYETHYL)ETHER
Authors:Morera, S, Vigouroux, A.
Deposit date:2018-12-19
Release date:2019-04-10
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:Kinetic and structural analysis of human ALDH9A1.
Biosci.Rep., 39, 2019
6HM2
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BU of 6hm2 by Molmil
Structure in P1 form of the PBP AgtB in complex with agropinic acid from A.tumefacien R10
Descriptor: 1,2-ETHANEDIOL, Agropine permease, SODIUM ION, ...
Authors:Morera, S, Marty, L, Vigouroux, A.
Deposit date:2018-09-12
Release date:2018-12-26
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Structural basis for two efficient modes of agropinic acid opine import into the bacterial pathogenAgrobacterium tumefaciens.
Biochem. J., 476, 2019
6HLY
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BU of 6hly by Molmil
Structure in P212121 form of the PBP AgtB in complex with agropinic acid from A.tumefacien R10
Descriptor: 1,2-ETHANEDIOL, Agropine permease, agropinic acid
Authors:Morera, S, Marty, L, Vigouroux, A.
Deposit date:2018-09-11
Release date:2018-12-26
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural basis for two efficient modes of agropinic acid opine import into the bacterial pathogenAgrobacterium tumefaciens.
Biochem. J., 476, 2019
6HLZ
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BU of 6hlz by Molmil
Structure in C2 form of the PBP AgtB from A.tumefacien R10 in complex with agropinic acid
Descriptor: 1,2-ETHANEDIOL, 1-ETHOXY-2-(2-ETHOXYETHOXY)ETHANE, Agropine permease, ...
Authors:Morera, S, Marty, L, Vigouroux, A.
Deposit date:2018-09-11
Release date:2018-12-26
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Structural basis for two efficient modes of agropinic acid opine import into the bacterial pathogenAgrobacterium tumefaciens.
Biochem. J., 476, 2019
6HQH
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BU of 6hqh by Molmil
Structure of Agrobacterium tumefaciens B6 strain PBP SocA complexed with Deoxyfructosylglutamine (DFG) at 1.8 A resolution
Descriptor: 1,2-ETHANEDIOL, Deoxyfructosylglutamine, Membrane-bound lytic murein transglycosylase F
Authors:Morera, S, Marty, L.
Deposit date:2018-09-25
Release date:2018-10-31
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Basis for High Specificity of Amadori Compound and Mannopine Opine Binding in Bacterial Pathogens.
J.Biol.Chem., 291, 2016
7UUY
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BU of 7uuy by Molmil
Structure of the sodium/iodide symporter (NIS)
Descriptor: 1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE, Sodium/iodide cotransporter
Authors:Ravera, S, Nicola, J.P, Salazar-De Simone, G, Sigworth, F, Karakas, E, Amzel, L.M, Bianchet, M, Carrasco, N.
Deposit date:2022-04-29
Release date:2022-12-21
Last modified:2023-01-04
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural insights into the mechanism of the sodium/iodide symporter.
Nature, 612, 2022
7UUZ
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BU of 7uuz by Molmil
Structure of the sodium/iodide symporter (NIS) in complex with perrhenate and sodium
Descriptor: 1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE, PERRHENATE, SODIUM ION, ...
Authors:Ravera, S, Nicola, J.P, Salazar-De Simone, G, Sigworth, F, Karakas, E, Amzel, L.M, Bianchet, M, Carrasco, N.
Deposit date:2022-04-29
Release date:2022-12-21
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural insights into the mechanism of the sodium/iodide symporter.
Nature, 612, 2022
7UV0
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BU of 7uv0 by Molmil
Structure of the sodium/iodide symporter (NIS) in complex with iodide and sodium
Descriptor: 1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE, IODIDE ION, SODIUM ION, ...
Authors:Ravera, S, Nicola, J.P, Salazar-De Simone, G, Sigworth, F, Karakas, E, Amzel, L.M, Bianchet, M, Carrasco, N.
Deposit date:2022-04-29
Release date:2022-12-21
Last modified:2023-01-04
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural insights into the mechanism of the sodium/iodide symporter.
Nature, 612, 2022
4POW
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BU of 4pow by Molmil
Structure of the PBP NocT in complex with pyronopaline
Descriptor: 1,2-ETHANEDIOL, 1-[(1S)-4-carbamimidamido-1-carboxybutyl]-5-oxo-D-proline, Nopaline-binding periplasmic protein
Authors:Morera, S, Vigouroux, A.
Deposit date:2014-02-26
Release date:2014-10-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Agrobacterium uses a unique ligand-binding mode for trapping opines and acquiring a competitive advantage in the niche construction on plant host.
Plos Pathog., 10, 2014
4PZ2
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BU of 4pz2 by Molmil
Structure of Zm ALDH2-6 (RF2F) in complex with NAD
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Morera, S, Vigouroux, A, Kopecny, D.
Deposit date:2014-03-28
Release date:2015-03-18
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Role and structural characterization of plant aldehyde dehydrogenases from family 2 and family 7.
Biochem.J., 468, 2015
4PXL
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BU of 4pxl by Molmil
Structure of Zm ALDH2-3 (RF2C) in complex with NAD
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, Cytosolic aldehyde dehydrogenase RF2C, ...
Authors:Morera, S, Vigouroux, A, Kopecny, D.
Deposit date:2014-03-24
Release date:2015-03-18
Last modified:2015-05-20
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Role and structural characterization of plant aldehyde dehydrogenases from family 2 and family 7.
Biochem.J., 468, 2015
4HS1
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BU of 4hs1 by Molmil
High-resolution crystal structure of Glutaredoxin like protein NrdH from Mycobacterium tuberculosis.
Descriptor: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Phulera, S, Mande, S.C.
Deposit date:2012-10-29
Release date:2013-06-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (0.87 Å)
Cite:The Crystal Structure of Mycobacterium tuberculosis NrdH at 0.87 A Suggests a Possible Mode of Its Activity.
Biochemistry, 52, 2013
5Y3C
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BU of 5y3c by Molmil
Crystal structure of zebrafish Ccd1 DIX domain
Descriptor: Dixin-A
Authors:Terawaki, S, Shibata, N, Higuchi, Y.
Deposit date:2017-07-28
Release date:2017-09-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Structural basis for Ccd1 auto-inhibition in the Wnt pathway through homomerization of the DIX domain.
Sci Rep, 7, 2017
5Y3B
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BU of 5y3b by Molmil
Crystal structure of mouse Ccd1 DIX domain
Descriptor: Dixin
Authors:Terawaki, S, Shibata, N, Higuchi, Y.
Deposit date:2017-07-28
Release date:2017-09-06
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural basis for Ccd1 auto-inhibition in the Wnt pathway through homomerization of the DIX domain.
Sci Rep, 7, 2017
3N2S
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BU of 3n2s by Molmil
Structure of NfrA1 nitroreductase from B. subtilis
Descriptor: CHLORIDE ION, FLAVIN MONONUCLEOTIDE, NADPH-dependent nitro/flavin reductase
Authors:Morera, S, Gueguen-Chaignon, V, Meyer, P, Cortial, S, Ouazzani, J.
Deposit date:2010-05-19
Release date:2010-09-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:NADH oxidase activity of Bacillus subtilis nitroreductase NfrA1: insight into its biological role.
Febs Lett., 584, 2010
4PP0
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BU of 4pp0 by Molmil
Structure of the PBP NocT-M117N in complex with pyronopaline
Descriptor: 1,2-ETHANEDIOL, 1-[(1S)-4-carbamimidamido-1-carboxybutyl]-5-oxo-D-proline, DI(HYDROXYETHYL)ETHER, ...
Authors:Morera, S, Vigouroux, A.
Deposit date:2014-02-26
Release date:2014-10-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Agrobacterium uses a unique ligand-binding mode for trapping opines and acquiring a competitive advantage in the niche construction on plant host.
Plos Pathog., 10, 2014
5CFG
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BU of 5cfg by Molmil
C2 crystal form of APE1 with Mg2+
Descriptor: DNA-(apurinic or apyrimidinic site) lyase, MAGNESIUM ION
Authors:Morera, S, Vigouroux, A.
Deposit date:2015-07-08
Release date:2016-07-06
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural comparison of AP endonucleases from the exonuclease III family reveals new amino acid residues in human AP endonuclease 1 that are involved in incision of damaged DNA.
Biochimie, 128-129, 2016
2YVC
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BU of 2yvc by Molmil
Crystal structure of the Radixin FERM domain complexed with the NEP cytoplasmic tail
Descriptor: Neprilysin, Radixin
Authors:Terawaki, S, Kitano, K, Hakoshima, T.
Deposit date:2007-04-11
Release date:2007-04-24
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural basis for type II membrane protein binding by ERM proteins revealed by the radixin-neutral endopeptidase 24.11 (NEP) complex
J.Biol.Chem., 282, 2007
4I8P
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BU of 4i8p by Molmil
Crystal structure of aminoaldehyde dehydrogenase 1a from Zea mays (ZmAMADH1a)
Descriptor: 1,2-ETHANEDIOL, Aminoaldehyde dehydrogenase 1, DI(HYDROXYETHYL)ETHER, ...
Authors:Morera, S, Vigouroux, A, Kopecny, D.
Deposit date:2012-12-04
Release date:2013-02-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Plant ALDH10 family: identifying critical residues for substrate specificity and trapping a thiohemiacetal intermediate.
J.Biol.Chem., 288, 2013
5CFE
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BU of 5cfe by Molmil
Bacillus subtilis AP endonuclease ExoA
Descriptor: CALCIUM ION, DI(HYDROXYETHYL)ETHER, Exodeoxyribonuclease
Authors:Morera, S, Vigouroux, A.
Deposit date:2015-07-08
Release date:2016-07-06
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Structural comparison of AP endonucleases from the exonuclease III family reveals new amino acid residues in human AP endonuclease 1 that are involved in incision of damaged DNA.
Biochimie, 128-129, 2016
4I8Q
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BU of 4i8q by Molmil
Structure of the aminoaldehyde dehydrogenase 1 E260A mutant from Solanum lycopersicum (SlAMADH1-E260A)
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Morera, S, Vigouroux, A, Kopecny, D.
Deposit date:2012-12-04
Release date:2013-02-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Plant ALDH10 family: identifying critical residues for substrate specificity and trapping a thiohemiacetal intermediate.
J.Biol.Chem., 288, 2013
4I9B
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BU of 4i9b by Molmil
Structure of aminoaldehyde dehydrogenase 1 from Solanum lycopersium (SlAMADH1) with a thiohemiacetal intermediate
Descriptor: (2-hydroxyethoxy)acetaldehyde, 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, ...
Authors:Morera, S, Vigouroux, A, Kopecny, D.
Deposit date:2012-12-05
Release date:2013-02-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Plant ALDH10 family: identifying critical residues for substrate specificity and trapping a thiohemiacetal intermediate.
J.Biol.Chem., 288, 2013
3X23
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BU of 3x23 by Molmil
Radixin complex
Descriptor: Peptide from Matrix metalloproteinase-14, Radixin
Authors:Terawaki, S, Kitano, K, Aoyama, M, Mori, T, Hakoshima, T.
Deposit date:2014-12-09
Release date:2015-10-21
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.396 Å)
Cite:MT1-MMP recognition by ERM proteins and its implication in CD44 shedding
Genes Cells, 20, 2015
4PXN
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BU of 4pxn by Molmil
Structure of Zm ALDH7 in complex with NAD
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Uncharacterized protein
Authors:Morera, S, Vigouroux, A, Kopecny, D.
Deposit date:2014-03-24
Release date:2015-03-18
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.94 Å)
Cite:Role and structural characterization of plant aldehyde dehydrogenases from family 2 and family 7.
Biochem.J., 468, 2015

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