Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 393 件

3N2S
DownloadVisualize
BU of 3n2s by Molmil
Structure of NfrA1 nitroreductase from B. subtilis
分子名称: CHLORIDE ION, FLAVIN MONONUCLEOTIDE, NADPH-dependent nitro/flavin reductase
著者Morera, S, Gueguen-Chaignon, V, Meyer, P, Cortial, S, Ouazzani, J.
登録日2010-05-19
公開日2010-09-15
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献NADH oxidase activity of Bacillus subtilis nitroreductase NfrA1: insight into its biological role.
Febs Lett., 584, 2010
5CFE
DownloadVisualize
BU of 5cfe by Molmil
Bacillus subtilis AP endonuclease ExoA
分子名称: CALCIUM ION, DI(HYDROXYETHYL)ETHER, Exodeoxyribonuclease
著者Morera, S, Vigouroux, A.
登録日2015-07-08
公開日2016-07-06
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Structural comparison of AP endonucleases from the exonuclease III family reveals new amino acid residues in human AP endonuclease 1 that are involved in incision of damaged DNA.
Biochimie, 128-129, 2016
6QAK
DownloadVisualize
BU of 6qak by Molmil
Structure of human ALDH9 in P21212 space group
分子名称: 1,2-ETHANEDIOL, 4-trimethylaminobutyraldehyde dehydrogenase
著者Morera, S, Vigouroux, A, Kopecny, D.
登録日2018-12-19
公開日2019-04-10
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Kinetic and structural analysis of human ALDH9A1.
Biosci.Rep., 39, 2019
6QAO
DownloadVisualize
BU of 6qao by Molmil
Structure of human aldehyde dehydrogenase 9A1 in P21 space group
分子名称: 4-trimethylaminobutyraldehyde dehydrogenase, DI(HYDROXYETHYL)ETHER
著者Morera, S, Vigouroux, A.
登録日2018-12-19
公開日2019-04-10
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.89 Å)
主引用文献Kinetic and structural analysis of human ALDH9A1.
Biosci.Rep., 39, 2019
6DW1
DownloadVisualize
BU of 6dw1 by Molmil
Cryo-EM structure of the benzodiazepine-sensitive alpha1beta1gamma2S tri-heteromeric GABAA receptor in complex with GABA (ECD map)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GAMMA-AMINO-BUTANOIC ACID, Gamma-aminobutyric acid receptor subunit alpha-1,Gamma-aminobutyric acid receptor subunit alpha-1, ...
著者Phulera, S, Zhu, H, Yu, J, Yoshioka, C, Gouaux, E.
登録日2018-06-26
公開日2018-08-08
最終更新日2023-11-15
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Cryo-EM structure of the benzodiazepine-sensitive alpha 1 beta 1 gamma 2S tri-heteromeric GABAAreceptor in complex with GABA.
Elife, 7, 2018
6EPY
DownloadVisualize
BU of 6epy by Molmil
Structure of the PBP MelB (Atu4661) in complex with raffinose from A.fabrum C58
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, Periplasmic alpha-galactoside-binding protein, ...
著者Morera, S, Vigouroux, A.
登録日2017-10-12
公開日2018-04-11
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献The plant defense signal galactinol is specifically used as a nutrient by the bacterial pathogenAgrobacterium fabrum.
J. Biol. Chem., 293, 2018
6DW0
DownloadVisualize
BU of 6dw0 by Molmil
Cryo-EM structure of the benzodiazepine-sensitive alpha1beta1gamma2S tri-heteromeric GABAA receptor in complex with GABA (Whole map)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GAMMA-AMINO-BUTANOIC ACID, Gamma-aminobutyric acid receptor subunit alpha-1,Gamma-aminobutyric acid receptor subunit alpha-1, ...
著者Phulera, S, Zhu, H, Yu, J, Yoshioka, C, Gouaux, E.
登録日2018-06-26
公開日2018-08-08
最終更新日2023-11-15
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Cryo-EM structure of the benzodiazepine-sensitive alpha 1 beta 1 gamma 2S tri-heteromeric GABAAreceptor in complex with GABA.
Elife, 7, 2018
6RU4
DownloadVisualize
BU of 6ru4 by Molmil
Structure of the SBP FpvC from pseudomonas aeruginosa in complex with Mn2+
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, MANGANESE (II) ION, ...
著者Morera, S, Vigouroux, A.
登録日2019-05-27
公開日2019-07-31
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献A unique ferrous iron binding mode is associated with large conformational changes for the transport protein FpvC of Pseudomonas aeruginosa.
Febs J., 287, 2020
6R6K
DownloadVisualize
BU of 6r6k by Molmil
Structure of a FpvC mutant from pseudomonas aeruginosa
分子名称: 1,2-ETHANEDIOL, ABC transporter substrate-binding protein, DI(HYDROXYETHYL)ETHER, ...
著者Morera, S, Vigouroux, A.
登録日2019-03-27
公開日2019-07-31
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献A unique ferrous iron binding mode is associated with large conformational changes for the transport protein FpvC of Pseudomonas aeruginosa.
Febs J., 287, 2020
5Y3C
DownloadVisualize
BU of 5y3c by Molmil
Crystal structure of zebrafish Ccd1 DIX domain
分子名称: Dixin-A
著者Terawaki, S, Shibata, N, Higuchi, Y.
登録日2017-07-28
公開日2017-09-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Structural basis for Ccd1 auto-inhibition in the Wnt pathway through homomerization of the DIX domain.
Sci Rep, 7, 2017
5Y3B
DownloadVisualize
BU of 5y3b by Molmil
Crystal structure of mouse Ccd1 DIX domain
分子名称: Dixin
著者Terawaki, S, Shibata, N, Higuchi, Y.
登録日2017-07-28
公開日2017-09-06
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural basis for Ccd1 auto-inhibition in the Wnt pathway through homomerization of the DIX domain.
Sci Rep, 7, 2017
6R3Z
DownloadVisualize
BU of 6r3z by Molmil
Structure of the SBP FpvC in complex with Ni2+ ion from P. aeruginosa in P212121 space group
分子名称: 1,2-ETHANEDIOL, NICKEL (II) ION, Probable adhesion protein
著者Morera, S, Marty, L.
登録日2019-03-21
公開日2019-07-31
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献A unique ferrous iron binding mode is associated with large conformational changes for the transport protein FpvC of Pseudomonas aeruginosa.
Febs J., 287, 2020
6R44
DownloadVisualize
BU of 6r44 by Molmil
Structure of the SBP FpvC in complex with Ni2+ ion from P.aeruginosa from P21 space group
分子名称: NICKEL (II) ION, Probable adhesion protein
著者Morera, S, Marty, L.
登録日2019-03-21
公開日2019-07-31
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献A unique ferrous iron binding mode is associated with large conformational changes for the transport protein FpvC of Pseudomonas aeruginosa.
Febs J., 287, 2020
6R5S
DownloadVisualize
BU of 6r5s by Molmil
Structure of the SBP FpvC from pseudomonas aeruginosa in complex with Fe(II)
分子名称: 1,2-ETHANEDIOL, Adhesion protein, FE (II) ION
著者Morera, S, Vigouroux, A.
登録日2019-03-25
公開日2019-07-31
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献A unique ferrous iron binding mode is associated with large conformational changes for the transport protein FpvC of Pseudomonas aeruginosa.
Febs J., 287, 2020
4K8M
DownloadVisualize
BU of 4k8m by Molmil
High resolution structure of M.tb NRDH
分子名称: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Phulera, S, Mande, S.C.
登録日2013-04-18
公開日2014-06-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (0.87 Å)
主引用文献The crystal structure of Mycobacterium tuberculosis NrdH at 0.87 angstrom suggests a possible mode of its activity.
Biochemistry, 52, 2013
4K1G
DownloadVisualize
BU of 4k1g by Molmil
Structure of E. coli Nfo(Endo IV)-H69A mutant bound to a cleaved DNA duplex containing a alphadA:T basepair
分子名称: DI(HYDROXYETHYL)ETHER, DNA (5'-D(*CP*GP*TP*CP*GP*TP*CP*GP*TP*GP*GP*AP*CP*GP*C)-3'), DNA (5'-D(*GP*CP*GP*TP*CP*C)-3'), ...
著者Morera, S, Vigouroux, A.
登録日2013-04-05
公開日2013-07-31
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Insight into mechanisms of 3'-5' exonuclease activity and removal of bulky 8,5'-cyclopurine adducts by apurinic/apyrimidinic endonucleases.
Proc.Natl.Acad.Sci.USA, 110, 2013
4POW
DownloadVisualize
BU of 4pow by Molmil
Structure of the PBP NocT in complex with pyronopaline
分子名称: 1,2-ETHANEDIOL, 1-[(1S)-4-carbamimidamido-1-carboxybutyl]-5-oxo-D-proline, Nopaline-binding periplasmic protein
著者Morera, S, Vigouroux, A.
登録日2014-02-26
公開日2014-10-22
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Agrobacterium uses a unique ligand-binding mode for trapping opines and acquiring a competitive advantage in the niche construction on plant host.
Plos Pathog., 10, 2014
4PZ2
DownloadVisualize
BU of 4pz2 by Molmil
Structure of Zm ALDH2-6 (RF2F) in complex with NAD
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
著者Morera, S, Vigouroux, A, Kopecny, D.
登録日2014-03-28
公開日2015-03-18
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Role and structural characterization of plant aldehyde dehydrogenases from family 2 and family 7.
Biochem.J., 468, 2015
4PXL
DownloadVisualize
BU of 4pxl by Molmil
Structure of Zm ALDH2-3 (RF2C) in complex with NAD
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, Cytosolic aldehyde dehydrogenase RF2C, ...
著者Morera, S, Vigouroux, A, Kopecny, D.
登録日2014-03-24
公開日2015-03-18
最終更新日2015-05-20
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Role and structural characterization of plant aldehyde dehydrogenases from family 2 and family 7.
Biochem.J., 468, 2015
4PP0
DownloadVisualize
BU of 4pp0 by Molmil
Structure of the PBP NocT-M117N in complex with pyronopaline
分子名称: 1,2-ETHANEDIOL, 1-[(1S)-4-carbamimidamido-1-carboxybutyl]-5-oxo-D-proline, DI(HYDROXYETHYL)ETHER, ...
著者Morera, S, Vigouroux, A.
登録日2014-02-26
公開日2014-10-22
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Agrobacterium uses a unique ligand-binding mode for trapping opines and acquiring a competitive advantage in the niche construction on plant host.
Plos Pathog., 10, 2014
4KPN
DownloadVisualize
BU of 4kpn by Molmil
Plant nucleoside hydrolase - PpNRh1 enzyme
分子名称: CALCIUM ION, Nucleoside N-ribohydrolase 1
著者Morera, S, Vigouroux, A, Kopecny, D.
登録日2013-05-14
公開日2013-11-27
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.35 Å)
主引用文献Structure and Function of Nucleoside Hydrolases from Physcomitrella patens and Maize Catalyzing the Hydrolysis of Purine, Pyrimidine, and Cytokinin Ribosides.
Plant Physiol., 163, 2013
4YTD
DownloadVisualize
BU of 4ytd by Molmil
Crystal structure of the C-terminal Coiled Coil of mouse Bicaudal D1
分子名称: PHOSPHATE ION, Protein bicaudal D homolog 1
著者Terawaki, S, Yoshikane, A, Higuchi, Y, Wakamatsu, K.
登録日2015-03-17
公開日2015-04-08
最終更新日2020-02-05
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural basis for cargo binding and autoinhibition of Bicaudal-D1 by a parallel coiled-coil with homotypic registry
Biochem.Biophys.Res.Commun., 460, 2015
4I8P
DownloadVisualize
BU of 4i8p by Molmil
Crystal structure of aminoaldehyde dehydrogenase 1a from Zea mays (ZmAMADH1a)
分子名称: 1,2-ETHANEDIOL, Aminoaldehyde dehydrogenase 1, DI(HYDROXYETHYL)ETHER, ...
著者Morera, S, Vigouroux, A, Kopecny, D.
登録日2012-12-04
公開日2013-02-20
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Plant ALDH10 family: identifying critical residues for substrate specificity and trapping a thiohemiacetal intermediate.
J.Biol.Chem., 288, 2013
3FJO
DownloadVisualize
BU of 3fjo by Molmil
Structure of chimeric YH CPR
分子名称: FLAVIN MONONUCLEOTIDE, FLAVIN-ADENINE DINUCLEOTIDE, NADPH-cytochrome P450 reductase
著者Morera, S, Aigrain, L, Truan, G.
登録日2008-12-15
公開日2009-06-16
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure of the open conformation of a functional chimeric NADPH cytochrome P450 reductase
Embo Rep., 10, 2009
2YVC
DownloadVisualize
BU of 2yvc by Molmil
Crystal structure of the Radixin FERM domain complexed with the NEP cytoplasmic tail
分子名称: Neprilysin, Radixin
著者Terawaki, S, Kitano, K, Hakoshima, T.
登録日2007-04-11
公開日2007-04-24
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural basis for type II membrane protein binding by ERM proteins revealed by the radixin-neutral endopeptidase 24.11 (NEP) complex
J.Biol.Chem., 282, 2007

221716

件を2024-06-26に公開中

PDB statisticsPDBj update infoContact PDBjnumon