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PDB: 40736 results

8RZI
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BU of 8rzi by Molmil
ZgGH129 from Zobellia galactanivorans soaked with 1,2-diF-ADG (3,6-Anhydro-2-deoxy-2-fluoro-a-D-galactopyranosyl fluoride) resulting in a trapped glycosyl-enzyme intermediate.
Descriptor: (1~{R},4~{S},5~{S},8~{S})-4-fluoranyl-2,6-dioxabicyclo[3.2.1]octan-8-ol, 1,2-ETHANEDIOL, CHLORIDE ION, ...
Authors:Roret, T, Czjzek, M, Ficko-Blean, E.
Deposit date:2024-02-12
Release date:2024-07-31
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Constrained Catalytic Itinerary of a Retaining 3,6-Anhydro-D-Galactosidase, a Key Enzyme in Red Algal Cell Wall Degradation.
Angew.Chem.Int.Ed.Engl., 2024
8QKR
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BU of 8qkr by Molmil
Plasmodium falciparum reticulocyte-binding protein homologue 5 (PfRH5) bound to R5.251
Descriptor: R5251VHCH, R5251VLCL, Reticulocyte-binding protein-like protein 5
Authors:Wright, N.D, Barrett, J.R, Bradshaw, W.J, Paterson, N.G, MacLean, E.M, Ferreira, L, McHugh, K, Koekemoer, L, Draper, S.J.
Deposit date:2023-09-16
Release date:2024-07-31
Method:X-RAY DIFFRACTION (3.234 Å)
Cite:Analysis of the Diverse Antigenic Landscape of the Malaria Invasion Protein RH5 Identifies a Potent Vaccine-Induced Human Public Antibody Clonotype.
To Be Published
8WZF
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BU of 8wzf by Molmil
Dark state SFX structure of hen egg white lysozyme microcrystals immobilized with a Mn carbonyl complex at RT.
Descriptor: CHLORIDE ION, Lysozyme C, SODIUM ION, ...
Authors:Maity, B, Shoji, M, Luo, F, Nakane, T, Abe, S, Owada, S, Kang, J, Tono, K, Tanaka, R, Thuc, T.T, Kojima, M, Hishikawa, Y, Tanaka, J, Tian, J, Noya, H, Nakasuji, Y, Asanuma, A, Yao, X, Iwata, S, Shigeta, Y, Nango, E, Ueno, T.
Deposit date:2023-11-01
Release date:2024-07-31
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Real-time observation of a metal complex-driven reaction intermediate using a porous protein crystal and serial femtosecond crystallography.
Nat Commun, 15, 2024
8WZG
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BU of 8wzg by Molmil
SFX structure of an Mn-carbonyl complex immobilized in hen egg white lysozyme microcrystals, 10 ns after photoexcitation at RT.
Descriptor: CHLORIDE ION, Lysozyme C, SODIUM ION, ...
Authors:Maity, B, Shoji, M, Luo, F, Nakane, T, Abe, S, Owada, S, Kang, J, Tono, K, Tanaka, R, Thuc, T.T, Kojima, M, Hishikawa, Y, Tanaka, J, Tian, J, Noya, H, Nakasuji, Y, Asanuma, A, Yao, X, Iwata, S, Shigeta, Y, Nango, E, Ueno, T.
Deposit date:2023-11-01
Release date:2024-07-31
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Real-time observation of a metal complex-driven reaction intermediate using a porous protein crystal and serial femtosecond crystallography.
Nat Commun, 15, 2024
8WZT
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BU of 8wzt by Molmil
SFX structure of an Mn-carbonyl complex immobilized in hen egg white lysozyme microcrystals, 1 microsecond after photoexcitation at RT.
Descriptor: CHLORIDE ION, Lysozyme C, SODIUM ION, ...
Authors:Maity, B, Shoji, M, Luo, F, Nakane, T, Abe, S, Owada, S, Kang, J, Tono, K, Tanaka, R, Thuc, T.T, Kojima, M, Hishikawa, Y, Tanaka, J, Tian, J, Noya, H, Nakasuji, Y, Asanuma, A, Yao, X, Iwata, S, Shigeta, Y, Nango, E, Ueno, T.
Deposit date:2023-11-02
Release date:2024-07-31
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Real-time observation of a metal complex-driven reaction intermediate using a porous protein crystal and serial femtosecond crystallography.
Nat Commun, 15, 2024
8WZV
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BU of 8wzv by Molmil
SFX structure of an Mn-carbonyl complex immobilized in hen egg white lysozyme microcrystals, 1 microsecond after photoexcitation with 40 microJoules laser intensity at RT.
Descriptor: CHLORIDE ION, Lysozyme C, SODIUM ION, ...
Authors:Maity, B, Shoji, M, Luo, F, Nakane, T, Abe, S, Owada, S, Kang, J, Tono, K, Tanaka, R, Thuc, T.T, Kojima, M, Hishikawa, Y, Tanaka, J, Tian, J, Noya, H, Nakasuji, Y, Asanuma, A, Yao, X, Iwata, S, Shigeta, Y, Nango, E, Ueno, T.
Deposit date:2023-11-02
Release date:2024-07-31
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Real-time observation of a metal complex-driven reaction intermediate using a porous protein crystal and serial femtosecond crystallography.
Nat Commun, 15, 2024
8RZK
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BU of 8rzk by Molmil
The Michaelis complex of ZgGH129 D486N from Zobellia galactanivorans with neo-b/k-oligo-carrageenan tetrasaccharide (beta-kappa neo-oligo-carrageenan DP4).
Descriptor: 1,2-ETHANEDIOL, 3,6-anhydro-alpha-D-galactopyranose-(1-3)-beta-D-galactopyranose-(1-4)-3,6-anhydro-alpha-D-galactopyranose-(1-3)-4-O-sulfo-beta-D-galactopyranose, CHLORIDE ION, ...
Authors:Roret, T, Czjzek, M, Ficko-Blean, E.
Deposit date:2024-02-12
Release date:2024-07-31
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Constrained Catalytic Itinerary of a Retaining 3,6-Anhydro-D-Galactosidase, a Key Enzyme in Red Algal Cell Wall Degradation.
Angew.Chem.Int.Ed.Engl., 2024
8TJS
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BU of 8tjs by Molmil
CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO GPZ6-a.01 FAB
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Antibody GPZ6-a.01 Heavy Chain, ...
Authors:Morano, N.C, Becker, J.E, Shapiro, L.
Deposit date:2023-07-24
Release date:2024-07-31
Method:ELECTRON MICROSCOPY (3.31 Å)
Cite:CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO GPZ6-a.01 FAB
To Be Published
2PNH
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BU of 2pnh by Molmil
Escherichia coli PriB E39A variant
Descriptor: Primosomal replication protein n
Authors:Lopper, M.E, Keck, J.L.
Deposit date:2007-04-24
Release date:2007-08-07
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:A hand-off mechanism for primosome assembly in replication restart.
Mol.Cell, 26, 2007
1ACW
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BU of 1acw by Molmil
SOLUTION NMR STRUCTURE OF P01, A NATURAL SCORPION PEPTIDE STRUCTURALLY ANALOGOUS TO SCORPION TOXINS SPECIFIC FOR APAMIN-SENSITIVE POTASSIUM CHANNEL, 25 STRUCTURES
Descriptor: NATURAL SCORPION PEPTIDE P01
Authors:Blanc, E, Fremont, V, Sizun, P, Meunier, S, Van Rietschoten, J, Thevand, A, Bernassau, J.M, Darbon, H.
Deposit date:1997-02-10
Release date:1997-04-01
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:Solution structure of P01, a natural scorpion peptide structurally analogous to scorpion toxins specific for apamin-sensitive potassium channel.
Proteins, 24, 1996
108D
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BU of 108d by Molmil
THE SOLUTION STRUCTURE OF A DNA COMPLEX WITH THE FLUORESCENT BIS INTERCALATOR TOTO DETERMINED BY NMR SPECTROSCOPY
Descriptor: 1,1-(4,4,8,8-TETRAMETHYL-4,8-DIAZAUNDECAMETHYLENE)-BIS-4-3-METHYL-2,3-DIHYDRO-(BENZO-1,3-THIAZOLE)-2-METHYLIDENE)-QUINOLINIUM, DNA (5'-D(*CP*GP*CP*TP*AP*GP*CP*G)-3')
Authors:Spielmann, H.P, Wemmer, D.E, Jacobsen, J.P.
Deposit date:1995-01-31
Release date:1995-06-03
Last modified:2024-03-13
Method:SOLUTION NMR
Cite:Solution structure of a DNA complex with the fluorescent bis-intercalator TOTO determined by NMR spectroscopy.
Biochemistry, 34, 1995
1AJR
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BU of 1ajr by Molmil
REFINEMENT AND COMPARISON OF THE CRYSTAL STRUCTURES OF PIG CYTOSOLIC ASPARTATE AMINOTRANSFERASE AND ITS COMPLEX WITH 2-METHYLASPARTATE
Descriptor: ASPARTATE AMINOTRANSFERASE
Authors:Rhee, S, Silva, M.M, Hyde, C.C, Rogers, P.H, Metzler, C.M, Metzler, D.E, Arnone, A.
Deposit date:1997-05-08
Release date:1997-08-20
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Refinement and comparisons of the crystal structures of pig cytosolic aspartate aminotransferase and its complex with 2-methylaspartate.
J.Biol.Chem., 272, 1997
1A90
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BU of 1a90 by Molmil
RECOMBINANT MUTANT CHICKEN EGG WHITE CYSTATIN, NMR, 31 STRUCTURES
Descriptor: CYSTATIN
Authors:Dieckmann, T, Mitschang, L, Hofmann, M, Kos, J, Turk, V, Auerswald, E.A, Jaenicke, R, Oschkinat, H.
Deposit date:1998-04-14
Release date:1998-06-17
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:The structures of native phosphorylated chicken cystatin and of a recombinant unphosphorylated variant in solution.
J.Mol.Biol., 234, 1993
1A91
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BU of 1a91 by Molmil
SUBUNIT C OF THE F1FO ATP SYNTHASE OF ESCHERICHIA COLI; NMR, 10 STRUCTURES
Descriptor: F1FO ATPASE SUBUNIT C
Authors:Girvin, M.E, Rastogi, V.K, Abildgaard, F, Markley, J.L, Fillingame, R.H.
Deposit date:1998-04-15
Release date:1998-07-01
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of the transmembrane H+-transporting subunit c of the F1F0 ATP synthase.
Biochemistry, 37, 1998
1ADX
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BU of 1adx by Molmil
FIFTH EGF-LIKE DOMAIN OF THROMBOMODULIN (TMEGF5), NMR, 14 STRUCTURES
Descriptor: THROMBOMODULIN
Authors:Sampoli-Benitez, B.A, Hunter, M.J, Meininger, D.P, Komives, E.A.
Deposit date:1997-02-18
Release date:1997-12-24
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:Structure of the fifth EGF-like domain of thrombomodulin: An EGF-like domain with a novel disulfide-bonding pattern.
J.Mol.Biol., 273, 1997
1AK2
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BU of 1ak2 by Molmil
ADENYLATE KINASE ISOENZYME-2
Descriptor: ADENYLATE KINASE ISOENZYME-2, SULFATE ION
Authors:Schlauderer, G.J, Schulz, G.E.
Deposit date:1995-12-29
Release date:1996-06-10
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:The structure of bovine mitochondrial adenylate kinase: comparison with isoenzymes in other compartments.
Protein Sci., 5, 1996
1A2G
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BU of 1a2g by Molmil
PROBING THE STRENGTH AND CHARACTER OF AN ASP-HIS-X HYDROGEN BOND BY INTRODUCING BURIED CHARGES
Descriptor: CYTOCHROME C PEROXIDASE, PROTOPORPHYRIN IX CONTAINING FE
Authors:Cao, Y, Goodin, D.B, Mcree, D.E.
Deposit date:1998-01-02
Release date:1998-11-25
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Probing the Strength and Character of an Asp-His-X Hydrogen Bond by Introducing Buried Charges
To be Published
8E67
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BU of 8e67 by Molmil
ETV6 H396Y variant bound to DNA containing the sequence GGAT
Descriptor: Complementary 15 bp strand, GGAT-containing 15 bp DNA, Transcription factor ETV6
Authors:Scheu, K, Chan, A.C, Murphy, M.E, McIntosh, L.P.
Deposit date:2022-08-22
Release date:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The functional role of histidine within the ETV6 ETS domain
to be published
8E66
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BU of 8e66 by Molmil
ETV6 H396Y variant bound to DNA containing the sequence GGAA
Descriptor: CACODYLATE ION, Complementary 15 bp strand, GGAA-containing 15 bp DNA, ...
Authors:Scheu, K, Chan, A.C, Murphy, M.E, McIntosh, L.P.
Deposit date:2022-08-22
Release date:2023-08-30
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:The functional role of histidine within the ETV6 ETS domain
to be published
6MC1
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BU of 6mc1 by Molmil
Structure of MAP kinase phosphatase 5 in complex with 3,3-dimethyl-1-((9-(methylthio)-5,6-dihydrothieno[3,4-h]quinazolin-2-yl)thio)butan-2-one, an allosteric inhibitor
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 3,3-dimethyl-1-{[9-(methylsulfanyl)-5,6-dihydrothieno[3,4-h]quinazolin-2-yl]sulfanyl}butan-2-one, ACETATE ION, ...
Authors:Gannam, Z.T.K, Anderson, K.S, Bennett, A.M, Lolis, E.
Deposit date:2018-08-30
Release date:2020-08-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:An allosteric site on MKP5 reveals a strategy for small-molecule inhibition.
Sci.Signal., 13, 2020
1A2F
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BU of 1a2f by Molmil
PROBING THE STRENGTH AND CHARACTER OF AN ASP-HIS-X HYDROGEN BOND BY INTRODUCING BURIED CHARGES
Descriptor: CYTOCHROME C PEROXIDASE, PROTOPORPHYRIN IX CONTAINING FE
Authors:Cao, Y, Goodin, D.B, Mcree, D.E.
Deposit date:1998-01-02
Release date:1998-11-25
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Probing the Strength and Character of an Asp-His-X Hydrogen Bond by Introducing Buried Charges
To be Published
1ANA
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BU of 1ana by Molmil
HELIX GEOMETRY AND HYDRATION IN AN A-DNA TETRAMER. IC-C-G-G
Descriptor: DNA (5'-D(*(C38)P*CP*GP*G)-3')
Authors:Conner, B.N, Yoon, C, Dickerson, J.L, Dickerson, R.E.
Deposit date:1982-06-04
Release date:1982-07-29
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Helix geometry and hydration in an A-DNA tetramer: IC-C-G-G
J.Mol.Biol., 174, 1984
1AE5
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BU of 1ae5 by Molmil
HUMAN HEPARIN BINDING PROTEIN
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, HEPARIN BINDING PROTEIN
Authors:Iversen, L.F, Kastrup, J.S, Bjorn, S.E, Rasmussen, P.B, Wiberg, F.C, Flodgaard, H.J, Larsen, I.K.
Deposit date:1997-03-05
Release date:1998-03-11
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of HBP, a multifunctional protein with a serine proteinase fold.
Nat.Struct.Biol., 4, 1997
1ABT
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BU of 1abt by Molmil
NMR SOLUTION STRUCTURE OF AN ALPHA-BUNGAROTOXIN(SLASH)NICOTINIC RECEPTOR PEPTIDE COMPLEX
Descriptor: ALPHA-BUNGAROTOXIN, NICOTINIC RECEPTOR PEPTIDE
Authors:Basus, V.J, Song, G, Hawrot, E.
Deposit date:1993-11-17
Release date:1994-01-31
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:NMR solution structure of an alpha-bungarotoxin/nicotinic receptor peptide complex.
Biochemistry, 32, 1993
1AC7
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BU of 1ac7 by Molmil
STRUCTURAL FEATURES OF THE DNA HAIRPIN D(ATCCTAGTTATAGGAT): THE FORMATION OF A G-A BASE PAIR IN THE LOOP, NMR, 10 STRUCTURES
Descriptor: DNA (5'-D(*AP*TP*CP*CP*TP*AP*GP*TP*TP*AP*TP*AP*GP*GP*AP*T)-3')
Authors:Van Dongen, M.J.P, Mooren, M.M.W, Willems, E.F.A, Van Der Marel, G.A, Van Boom, J.H, Wijmenga, S.S, Hilbers, C.W.
Deposit date:1997-02-14
Release date:1997-07-07
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural features of the DNA hairpin d(ATCCTA-GTTA-TAGGAT): formation of a G-A base pair in the loop.
Nucleic Acids Res., 25, 1997

223166

數據於2024-07-31公開中

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