Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 40966 件

1M3E
DownloadVisualize
BU of 1m3e by Molmil
Succinyl-COA:3-ketoacid COA transferase from pig heart (selenomethionine)
分子名称: SUCCINYL-COA:3-KETOACID-COENZYME A TRANSFERASE
著者Bateman, K.S, Brownie, E.R, Wolodko, W.T, Fraser, M.E.
登録日2002-06-27
公開日2003-01-07
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure of the Mammalian CoA Transferase from Pig Heart
Biochemistry, 41, 2002
5V2S
DownloadVisualize
BU of 5v2s by Molmil
Crystal structure of glycoprotein B from Herpes Simplex Virus type I
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein B
著者Cooper, R.S, Heldwein, E.E.
登録日2017-03-06
公開日2018-05-16
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Structural basis for membrane anchoring and fusion regulation of the herpes simplex virus fusogen gB.
Nat. Struct. Mol. Biol., 25, 2018
6HAV
DownloadVisualize
BU of 6hav by Molmil
Crystal structure of [Fe]-hydrogenase (Hmd) from Methanococcus aeolicus in complex with FeGP and methenyl-tetrahydromethanopterin (close form A) at 1.06 A resolution
分子名称: 1-{4-[(6S,6aR,7R)-3-amino-6,7-dimethyl-1-oxo-1,2,5,6,6a,7-hexahydro-8H-imidazo[1,5-f]pteridin-10-ium-8-yl]phenyl}-1-deoxy-5-O-{5-O-[(S)-{[(1S)-1,3-dicarboxypropyl]oxy}(hydroxy)phosphoryl]-alpha-D-ribofuranosyl}-D-ribitol, 5,10-methenyltetrahydromethanopterin hydrogenase, GLYCEROL, ...
著者Huang, G, Wagner, T, Wodrich, M.D, Ataka, K, Bill, E, Ermler, U, Hu, X, Shima, S.
登録日2018-08-08
公開日2019-08-28
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.06 Å)
主引用文献The atomic-resolution crystal structure of activated [Fe]-hydrogenase
Nat Catal, 2019
1PR2
DownloadVisualize
BU of 1pr2 by Molmil
Escherichia coli Purine Nucleoside Phosphorylase Complexed with 9-beta-D-[2-deoxyribofuranosyl]-6-methylpurine and Phosphate/Sulfate
分子名称: 9-(2-DEOXY-BETA-D-RIBOFURANOSYL)-6-METHYLPURINE, PHOSPHATE ION, Purine nucleoside phosphorylase DeoD-type
著者Bennett, E.M, Li, C, Allan, P.W, Parker, W.B, Ealick, S.E.
登録日2003-06-19
公開日2003-11-25
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural basis for substrate specificity of Escherichia coli purine nucleoside phosphorylase.
J.Biol.Chem., 278, 2003
7PR1
DownloadVisualize
BU of 7pr1 by Molmil
Structure of CtAtm1 in the occluded conformation with ATP bound
分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Putative iron-sulfur protein
著者Li, P, Wang, K.T, Gourdon, P.E.
登録日2021-09-20
公開日2022-08-10
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (2.81 Å)
主引用文献Structures of Atm1 provide insight into [2Fe-2S] cluster export from mitochondria.
Nat Commun, 13, 2022
5YCF
DownloadVisualize
BU of 5ycf by Molmil
Crystal structure of Xiphophorus maculatus adenylate kinase
分子名称: Adenylate kinase isoenzyme 1, BIS(ADENOSINE)-5'-PENTAPHOSPHATE
著者Bae, E, Kim, J, Moon, S.
登録日2017-09-07
公開日2018-09-12
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.938 Å)
主引用文献Crystal structure of Xiphophorus maculatus adenylate kinase
To Be Published
6N0J
DownloadVisualize
BU of 6n0j by Molmil
The complex of CCG-222740 bound to pirin
分子名称: (3S)-N-(4-chlorophenyl)-5,5-difluoro-1-[3-(furan-2-yl)benzene-1-carbonyl]piperidine-3-carboxamide, 1,2-ETHANEDIOL, FE (III) ION, ...
著者Lisabeth, E.M, Jin, X, Neubig, R.
登録日2018-11-07
公開日2019-07-10
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Identification of Pirin as a Molecular Target of the CCG-1423/CCG-203971 Series of Antifibrotic and Antimetastatic Compounds
ACS Pharmacol Transl Sci, 2, 2019
6BJC
DownloadVisualize
BU of 6bjc by Molmil
TPX2_mini decorated GMPCPP-microtubule
分子名称: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER, ...
著者Zhang, R, Nogales, E.
登録日2017-11-05
公開日2017-11-22
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structural insight into TPX2-stimulated microtubule assembly.
Elife, 6, 2017
5D1W
DownloadVisualize
BU of 5d1w by Molmil
Crystal structure of Mycobacterium tuberculosis Rv3249c transcriptional regulator.
分子名称: PALMITIC ACID, Rv3249c transcriptional regulator
著者Chou, T.-H, Delmar, J, Su, C.-C, Yu, E.
登録日2015-08-04
公開日2015-09-30
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (3.59 Å)
主引用文献Structural Basis for the Regulation of the MmpL Transporters of Mycobacterium tuberculosis.
J.Biol.Chem., 290, 2015
6BMC
DownloadVisualize
BU of 6bmc by Molmil
The structure of a dimeric type II DAH7PS associated with pyocyanin biosynthesis in Pseudomonas aeruginosa
分子名称: CHLORIDE ION, COBALT (II) ION, PHOSPHOENOLPYRUVATE, ...
著者Sterritt, O.W, Jameson, G.B, Parker, E.J.
登録日2017-11-14
公開日2018-10-03
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural and functional characterisation of the entry point to pyocyanin biosynthesis inPseudomonas aeruginosadefines a new 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase subclass.
Biosci. Rep., 38, 2018
7K0R
DownloadVisualize
BU of 7k0r by Molmil
Nucleotide bound SARS-CoV-2 Nsp15
分子名称: PHOSPHATE ION, URIDINE-5'-MONOPHOSPHATE, Uridylate-specific endoribonuclease
著者Pillon, M.C, Stanley, R.E.
登録日2020-09-04
公開日2020-12-09
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Cryo-EM structures of the SARS-CoV-2 endoribonuclease Nsp15 reveal insight into nuclease specificity and dynamics.
Nat Commun, 12, 2021
3VEK
DownloadVisualize
BU of 3vek by Molmil
Both Zn Fingers of GATA1 Bound to Palindromic DNA Recognition Site, P1 Crystal Form
分子名称: DNA (5'-D(*AP*AP*GP*AP*GP*TP*CP*CP*AP*TP*CP*TP*GP*AP*TP*AP*AP*GP*AP*C)-3'), DNA (5'-D(*TP*TP*GP*TP*CP*TP*TP*AP*TP*CP*AP*GP*AP*TP*GP*GP*AP*CP*TP*C)-3'), Erythroid transcription factor, ...
著者Jacques, D.A, Ripin, N, Wilkinson-White, L.E, Guss, J.M, Matthews, J.M.
登録日2012-01-09
公開日2013-01-16
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.63 Å)
主引用文献GATA1 directly mediates interactions with closely spaced pseudopalindromic but not distantly spaced double GATA sites on DNA.
Protein Sci., 24, 2015
4ZM5
DownloadVisualize
BU of 4zm5 by Molmil
Shigella flexneri lipopolysaccharide O-antigen chain-length regulator WzzBSF - A107P mutant
分子名称: CHLORIDE ION, Chain length determinant protein, MAGNESIUM ION
著者Ericsson, D.J, Chang, C.-W, Lonhienne, T, Casey, L, Benning, F, Kobe, B, Tran, E.N.H, Morona, R.
登録日2015-05-02
公開日2016-03-23
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.47 Å)
主引用文献Structural and Biochemical Analysis of a Single Amino-Acid Mutant of WzzBSF That Alters Lipopolysaccharide O-Antigen Chain Length in Shigella flexneri.
Plos One, 10, 2015
4ZF8
DownloadVisualize
BU of 4zf8 by Molmil
Cytochrome P450 pentamutant from BM3 with bound Metyrapone
分子名称: Bifunctional P-450/NADPH-P450 reductase, METYRAPONE, NICKEL (II) ION, ...
著者Rogers, W.E, Othman, T, Heidary, D.K, Huxford, T.
登録日2015-04-21
公開日2016-07-13
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.766 Å)
主引用文献Effect of Mutation and Substrate Binding on the Stability of Cytochrome P450BM3 Variants.
Biochemistry, 55, 2016
7SGS
DownloadVisualize
BU of 7sgs by Molmil
Cryo-EM structure of full-length MAP7 bound to the microtubule
分子名称: Ensconsin, GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, ...
著者Ferro, L.S, Fang, Q, Eshun-Wilson, L, Fernandes, J, Jack, A, Farrell, D.P, Golcuk, M, Huijben, T, Costa, K, Gur, M, DiMaio, F, Nogales, E, Yildiz, A.
登録日2021-10-07
公開日2022-05-18
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structural and functional insight into regulation of kinesin-1 by microtubule-associated protein MAP7.
Science, 375, 2022
5DCW
DownloadVisualize
BU of 5dcw by Molmil
Iridoid synthase from Catharanthus roseus - ligand free structure
分子名称: 1,2-ETHANEDIOL, Iridoid synthase
著者Caputi, L, Kries, H, Stevenson, C.E.M, Kamileen, M.O, Sherden, N.H, Geu-Flores, F, Lawson, D.M, O'Connor, S.E.
登録日2015-08-24
公開日2015-10-28
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural determinants of reductive terpene cyclization in iridoid biosynthesis.
Nat.Chem.Biol., 12, 2016
6HIQ
DownloadVisualize
BU of 6hiq by Molmil
Mouse serotonin 5-HT3 receptor, serotonin-bound, I2 conformation
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 5-hydroxytryptamine receptor 3A, ...
著者Polovinkin, L, Neumann, E, Schoehn, G, Nury, H.
登録日2018-08-30
公開日2018-11-07
最終更新日2022-09-14
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Conformational transitions of the serotonin 5-HT3receptor.
Nature, 563, 2018
1M9R
DownloadVisualize
BU of 1m9r by Molmil
human endothelial nitric oxide synthase with 3-Bromo-7-Nitroindazole bound
分子名称: 3-BROMO-7-NITROINDAZOLE, PROTOPORPHYRIN IX CONTAINING FE, ZINC ION, ...
著者Rosenfeld, R.J, Garcin, E.D, Panda, K, Andersson, G, Aberg, A, Wallace, A.V, Stuehr, D.J, Tainer, J.A, Getzoff, E.D.
登録日2002-07-29
公開日2002-08-14
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.56 Å)
主引用文献Conformational Changes in Nitric Oxide Synthases Induced by Chlorzoxazone and Nitroindazoles: Crystallographic and Computational Analyses of Inhibitor Potency
Biochemistry, 41, 2002
6W69
DownloadVisualize
BU of 6w69 by Molmil
The structure of F64, S172A Keap1-BTB domain
分子名称: Kelch-like ECH-associated protein 1
著者Mena, E.L, Gee, C.L, Kuriyan, J, Rape, M.
登録日2020-03-16
公開日2020-08-19
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.501 Å)
主引用文献Structural basis for dimerization quality control.
Nature, 586, 2020
7S1X
DownloadVisualize
BU of 7s1x by Molmil
Cryo-EM structure of human NKCC1 K289NA492EL671C bound with bumetanide
分子名称: 3-(butylamino)-4-phenoxy-5-sulfamoylbenzoic acid, CHLORIDE ION, POTASSIUM ION, ...
著者Zhao, Y.X, Cao, E.H.
登録日2021-09-02
公開日2022-05-25
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Structural basis for inhibition of the Cation-chloride cotransporter NKCC1 by the diuretic drug bumetanide
Nat Commun, 13, 2022
7S3O
DownloadVisualize
BU of 7s3o by Molmil
NMR Solution Structure of hGal(2-12)KK, a solubility-tagged truncation of the human neuropeptide galanin
分子名称: Galanin
著者Kraichely, K.N, Clinkscales, S.E, Parnham, S, Giuliano, M.W.
登録日2021-09-07
公開日2022-05-25
最終更新日2022-07-06
実験手法SOLUTION NMR
主引用文献Minimal Increments of Hydrophobic Collapse within the N-Terminus of the Neuropeptide Galanin.
Biochemistry, 61, 2022
6Q69
DownloadVisualize
BU of 6q69 by Molmil
Crystal structure of porcine ACBD3 GOLD domain in complex with 3A protein of enterovirus-G1
分子名称: Genome polyprotein, Peripherial benzodiazepine receptor associated protein
著者Smola, M, Boura, E, Klima, M.
登録日2018-12-10
公開日2019-11-13
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.747 Å)
主引用文献Structural basis for hijacking of the host ACBD3 protein by bovine and porcine enteroviruses and kobuviruses.
Arch. Virol., 165, 2020
7S3C
DownloadVisualize
BU of 7s3c by Molmil
Crystal structure of intact U2AF65 RRM-region bound to AdML-A5 oligonucleotide
分子名称: DNA/RNA (5'-R(P*UP*UP*(UD)P*AP*U)-D(P*(BRU))-R(P*CP*C)-3'), Splicing factor U2AF 65 kDa subunit
著者Glasser, E, Jenkins, J.L, Kielkopf, C.L.
登録日2021-09-05
公開日2022-05-25
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.51 Å)
主引用文献Pre-mRNA splicing factor U2AF2 recognizes distinct conformations of nucleotide variants at the center of the pre-mRNA splice site signal.
Nucleic Acids Res., 50, 2022
6PT8
DownloadVisualize
BU of 6pt8 by Molmil
Crystal Structure of CobT from Methanocaldococcus jannaschii in complex with Adenine Alpha-Ribotide and Nicotinic Acid
分子名称: ALPHA-ADENOSINE MONOPHOSPHATE, NICOTINIC ACID, PHOSPHATE ION, ...
著者Schwarzwalder, A.H, Jeter, V.L, Vecellio, A.A, Erpenbach, E, Escalante, J.C, Rayment, I.
登録日2019-07-15
公開日2020-07-22
最終更新日2024-04-10
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structural studies of the phosphoribosyltransferase involved in cobamide biosynthesis in methanogenic archaea and cyanobacteria.
Sci Rep, 12, 2022
6Q6I
DownloadVisualize
BU of 6q6i by Molmil
Lysine decarboxylase A from Pseudomonas aeruginosa
分子名称: Biodegradative arginine decarboxylase, PYRIDOXAL-5'-PHOSPHATE
著者Kandiah, E, Gutsche, I.
登録日2018-12-11
公開日2019-09-25
最終更新日2019-10-23
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Cryo-EM structure of Lysine decarboxylase A from Pseudomonas aeruginosa
To Be Published

224931

件を2024-09-11に公開中

PDB statisticsPDBj update infoContact PDBjnumon