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PDB: 92 件

5EJX
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X-ray Free Electron Laser Structure of Cytochrome C Peroxidase
分子名称: Cytochrome c peroxidase, mitochondrial, PHOSPHATE ION, ...
著者Doukov, T, Soltis, S.M, Baxter, E.L, Cohen, A, Song, J, McPhillips, S, Poulos, T.L, Meharenna, Y.T, Chreifi, G.
登録日2015-11-02
公開日2016-01-20
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal structure of the pristine peroxidase ferryl center and its relevance to proton-coupled electron transfer.
Proc.Natl.Acad.Sci.USA, 113, 2016
5EJT
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Thermally annealed ferryl Cytochrome C Peroxidase crystal structure
分子名称: Cytochrome c peroxidase, mitochondrial, PHOSPHATE ION, ...
著者Doukov, T, Soltis, S.M, Baxter, E.L, Cohen, A, Song, J, McPhillips, S, Poulos, T.L, Meharenna, Y.T, Chreifi, G.
登録日2015-11-02
公開日2016-01-20
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Crystal structure of the pristine peroxidase ferryl center and its relevance to proton-coupled electron transfer.
Proc.Natl.Acad.Sci.USA, 113, 2016
8F01
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Thaumatin Anomalous Dataset at 293 K and 7.1 keV
分子名称: L(+)-TARTARIC ACID, POTASSIUM ION, Thaumatin I
著者Doukov, T, Yabukarski, F, Herschlag, D.
登録日2022-11-01
公開日2023-03-15
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Obtaining anomalous and ensemble information from protein crystals from 220 K up to physiological temperatures.
Acta Crystallogr D Struct Biol, 79, 2023
8F05
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Proteinase K Anomalous Dataset at 293 K and 7.1 keV
分子名称: CALCIUM ION, Proteinase K, SULFATE ION
著者Doukov, T, Yabukarski, F, Herschlag, D.
登録日2022-11-01
公開日2023-03-15
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Obtaining anomalous and ensemble information from protein crystals from 220 K up to physiological temperatures.
Acta Crystallogr D Struct Biol, 79, 2023
8EZX
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Lysozyme Anomalous Dataset at 293 K and 7.1 keV
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Lysozyme C, ...
著者Doukov, T, Yabukarski, F, Herschlag, D.
登録日2022-11-01
公開日2023-03-15
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Obtaining anomalous and ensemble information from protein crystals from 220 K up to physiological temperatures.
Acta Crystallogr D Struct Biol, 79, 2023
8EZO
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BU of 8ezo by Molmil
Lysozyme Anomalous Dataset at 220 K and 7.1 keV
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Lysozyme C, ...
著者Doukov, T, Yabukarski, F.
登録日2022-11-01
公開日2023-03-15
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Obtaining anomalous and ensemble information from protein crystals from 220 K up to physiological temperatures.
Acta Crystallogr D Struct Biol, 79, 2023
8F0B
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BU of 8f0b by Molmil
Lysozyme Anomalous Dataset at 240 K and 7.1 keV
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Lysozyme C, ...
著者Doukov, T, Yabukarski, F, Herschlag, D.
登録日2022-11-02
公開日2023-03-15
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Obtaining anomalous and ensemble information from protein crystals from 220 K up to physiological temperatures.
Acta Crystallogr D Struct Biol, 79, 2023
8F07
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BU of 8f07 by Molmil
Proteinase K Anomalous Dataset at 273 K and 12 keV
分子名称: CALCIUM ION, Proteinase K, SULFATE ION
著者Doukov, T, Yabukarski, F, Herschlag, D.
登録日2022-11-01
公開日2023-03-15
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献Obtaining anomalous and ensemble information from protein crystals from 220 K up to physiological temperatures.
Acta Crystallogr D Struct Biol, 79, 2023
8F03
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Thaumatin Anomalous Dataset at 293 K and 12 keV
分子名称: L(+)-TARTARIC ACID, POTASSIUM ION, Thaumatin I
著者Doukov, T, Yabukarski, F, Herschlag, D.
登録日2022-11-01
公開日2023-03-15
実験手法X-RAY DIFFRACTION (1.39 Å)
主引用文献Obtaining anomalous and ensemble information from protein crystals from 220 K up to physiological temperatures.
Acta Crystallogr D Struct Biol, 79, 2023
8F00
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BU of 8f00 by Molmil
Lysozyme Anomalous Dataset at 293 K and 12 keV
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Lysozyme C, ...
著者Doukov, T, Yabukarski, F, Herschlag, D.
登録日2022-11-01
公開日2023-03-15
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Obtaining anomalous and ensemble information from protein crystals from 220 K up to physiological temperatures.
Acta Crystallogr D Struct Biol, 79, 2023
8EZU
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BU of 8ezu by Molmil
Lysozyme Anomalous Dataset at 273 K and 7.1 keV
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Lysozyme C, ...
著者Doukov, T, Yabukarski, F, Herschlag, D.
登録日2022-11-01
公開日2023-03-15
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.901 Å)
主引用文献Obtaining anomalous and ensemble information from protein crystals from 220 K up to physiological temperatures.
Acta Crystallogr D Struct Biol, 79, 2023
8F06
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BU of 8f06 by Molmil
Proteinase K Anomalous Dataset at 310 K and 7.1 keV
分子名称: CALCIUM ION, Proteinase K, SULFATE ION
著者Doukov, T, Yabukarski, F, Herschlag, D.
登録日2022-11-01
公開日2023-03-15
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Obtaining anomalous and ensemble information from protein crystals from 220 K up to physiological temperatures.
Acta Crystallogr D Struct Biol, 79, 2023
8EZP
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BU of 8ezp by Molmil
Lysozyme Anomalous Dataset at 260 K and 7.1 keV
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Lysozyme C, ...
著者Doukov, T, Yabukarski, F, Herschlag, D.
登録日2022-11-01
公開日2023-03-15
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Obtaining anomalous and ensemble information from protein crystals from 220 K up to physiological temperatures.
Acta Crystallogr D Struct Biol, 79, 2023
3HSP
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BU of 3hsp by Molmil
Ternary structure of neuronal nitric oxide synthase with NHA and NO bound(2)
分子名称: 5,6,7,8-TETRAHYDROBIOPTERIN, ACETATE ION, GLYCEROL, ...
著者Doukov, T, Li, H, Soltis, M, Poulos, T.L.
登録日2009-06-10
公開日2009-10-20
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Single crystal structural and absorption spectral characterizations of nitric oxide synthase complexed with N(omega)-hydroxy-L-arginine and diatomic ligands.
Biochemistry, 48, 2009
3HSO
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BU of 3hso by Molmil
Ternary structure of neuronal nitric oxide synthase with NHA and NO bound(1)
分子名称: 5,6,7,8-TETRAHYDROBIOPTERIN, ACETATE ION, N-OMEGA-HYDROXY-L-ARGININE, ...
著者Doukov, T, Li, H, Soltis, M, Poulos, T.L.
登録日2009-06-10
公開日2009-10-20
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献Single crystal structural and absorption spectral characterizations of nitric oxide synthase complexed with N(omega)-hydroxy-L-arginine and diatomic ligands.
Biochemistry, 48, 2009
3HSN
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BU of 3hsn by Molmil
Ternary structure of neuronal nitric oxide synthase with NHA and CO bound
分子名称: 5,6,7,8-TETRAHYDROBIOPTERIN, ACETATE ION, CARBON MONOXIDE, ...
著者Doukov, T, Li, H, Soltis, M, Poulos, T.L.
登録日2009-06-10
公開日2009-10-20
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Single crystal structural and absorption spectral characterizations of nitric oxide synthase complexed with N(omega)-hydroxy-L-arginine and diatomic ligands.
Biochemistry, 48, 2009
4GED
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BU of 4ged by Molmil
Crystal Structure of the Leishmania Major Peroxidase-Cytochrome C Complex
分子名称: Ascorbate peroxidase, Cytochrome c, HEME C, ...
著者Jasion, V.S, Doukov, T, Pineda, S.H, Li, H, Poulos, T.L.
登録日2012-08-01
公開日2012-10-24
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Crystal structure of the Leishmania major peroxidase-cytochrome c complex.
Proc.Natl.Acad.Sci.USA, 109, 2012
7N2B
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BU of 7n2b by Molmil
A DARPin semi-rigidly fused to the 3TEL crystallization chaperone
分子名称: Transcription factor ETV6,Transcription factor ETV6,Transcription factor ETV6,3TEL-rigid-DARPin
著者Sarath Nawarathange, S.D, Gajjar, P, Bunn, D, Stewart, C, Doukov, T, Moody, J.D.
登録日2021-05-28
公開日2021-06-09
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.221 Å)
主引用文献Crystals of TELSAM-target protein fusions that exhibit minimal crystal contacts and lack direct inter-TELSAM contacts.
Open Biology, 12, 2022
7N1O
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The von Willebrand factor A domain of human capillary morphogenesis gene II, flexibly fused to the 1TEL crystallization chaperone
分子名称: CHLORIDE ION, MAGNESIUM ION, Transcription factor ETV6,Isoform 4 of Anthrax toxin receptor 2
著者Mathis, M.H, Bezzant, B.D, Ramirez, D.T, Sarath Nawarathnage, S.D, Doukov, T, Moody, J.D.
登録日2021-05-27
公開日2021-06-09
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.77 Å)
主引用文献Crystals of TELSAM-target protein fusions that exhibit minimal crystal contacts and lack direct inter-TELSAM contacts.
Open Biology, 12, 2022
8FZV
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BU of 8fzv by Molmil
The von Willebrand factor A domain of human capillary morphogenesis gene II, flexibly fused to the 1TEL crystallization chaperone, Ala-Ala linker variant, expressed with SUMO tag
分子名称: MAGNESIUM ION, Transcription factor ETV6,Anthrax toxin receptor 2, UNKNOWN ATOM OR ION
著者Pedroza Romo, M.J, Soleimani, S, Doukov, T, Lebedev, A, Moody, J.D.
登録日2023-01-30
公開日2023-07-19
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.29 Å)
主引用文献Increasing the bulk of the 1TEL-target linker and retaining the 10×His tag in a 1TEL-CMG2-vWa construct improves crystal order and diffraction limits.
Acta Crystallogr D Struct Biol, 79, 2023
8FZU
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BU of 8fzu by Molmil
The von Willebrand factor A domain of human capillary morphogenesis gene II, flexibly fused to the 1TEL crystallization chaperone, Thr-Val linker variant, Expressed with SUMO tag
分子名称: POTASSIUM ION, SULFATE ION, Transcription factor ETV6,Anthrax toxin receptor 2
著者Gajjar, P.L, Litchfield, C.M, Callahan, M, Redd, N, Doukov, T, Lebedev, A, Moody, J.D.
登録日2023-01-30
公開日2023-07-19
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Increasing the bulk of the 1TEL-target linker and retaining the 10×His tag in a 1TEL-CMG2-vWa construct improves crystal order and diffraction limits.
Acta Crystallogr D Struct Biol, 79, 2023
8ASH
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Crystal structure of d(CCGGGGTACCCCGG) with XRB
分子名称: 4-[(~{E})-(3,6-dimethyl-1,3-benzothiazol-2-yl)iminomethyl]-~{N},~{N}-dimethyl-aniline, DNA (5'-D(*CP*CP*GP*GP*GP*GP*TP*AP*CP*CP*CP*CP*GP*G)-3')
著者Sbirkova-Dimitrova, H.I, Shivachev, B.L, Rusev, R, Kuvandjiev, N, Heroux, A, Doukov, T.
登録日2022-08-19
公開日2023-01-18
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.837 Å)
主引用文献Structural Characterization of Alzheimer DNA Promoter Sequences from the Amyloid Precursor Gene in the Presence of Thioflavin T and Analogs
Crystals, 12, 2022
8ASK
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BU of 8ask by Molmil
Crystal structure of d(GCCCACCACGGC)
分子名称: DNA (5'-D(P*GP*CP*CP*CP*AP*CP*CP*AP*CP*GP*GP*C)-3'), DNA (5'-D(P*GP*CP*CP*GP*TP*GP*GP*TP*GP*GP*GP*C)-3')
著者Sbirkova-Dimitrova, H.I, Shivachev, B.L, Rusev, R, Heroux, A, Doukov, T, Kuvandjiev, N.
登録日2022-08-19
公開日2023-01-18
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.955 Å)
主引用文献Structural Characterization of Alzheimer DNA Promoter Sequences from the Amyloid Precursor Gene in the Presence of Thioflavin T and Analogs
Crystals, 12, 2022
6P44
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Crystal Structure of Ketosteroid Isomerase D38N mutant from Mycobacterium hassiacum (mhKSI) bound to 3,4-dinitrophenol
分子名称: 3,4-dinitrophenol, GUANIDINE, SULFATE ION, ...
著者Yabukarski, F, Doukov, T, Pinney, M, Herschlag, D.
登録日2019-05-25
公開日2020-05-27
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.251 Å)
主引用文献Parallel molecular mechanisms for enzyme temperature adaptation.
Science, 371, 2021
6P3L
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Crystal Structure of Ketosteroid Isomerase from Mycobacterium hassiacum (mhKSI)
分子名称: GUANIDINE, SULFATE ION, SnoaL-like domain protein
著者Yabukarski, F, Doukov, T, Pinney, M, Herschlag, D.
登録日2019-05-23
公開日2020-05-27
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.571 Å)
主引用文献Parallel molecular mechanisms for enzyme temperature adaptation.
Science, 371, 2021

 

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