Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 124 件

8SOU
DownloadVisualize
BU of 8sou by Molmil
Proteinase K Multiconformer Model at 363K
分子名称: ALA-ALA-ALA-SER-VAL-LYS, CALCIUM ION, Proteinase K, ...
著者Du, S, Wankowicz, S, Yabukarski, F, Doukov, T, Herschlag, D, Fraser, J.S.
登録日2023-04-30
公開日2023-08-09
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献Refinement of multiconformer ensemble models from multi-temperature X-ray diffraction data.
Methods Enzymol., 688, 2023
8SQV
DownloadVisualize
BU of 8sqv by Molmil
Proteinase K Multiconformer Model at 333K
分子名称: CALCIUM ION, Proteinase K, SULFATE ION
著者Du, S, Wankowicz, S, Yabukarski, F, Doukov, T, Herschlag, D, Fraser, J.S.
登録日2023-05-04
公開日2023-08-09
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.22 Å)
主引用文献Refinement of multiconformer ensemble models from multi-temperature X-ray diffraction data.
Methods Enzymol., 688, 2023
8SOG
DownloadVisualize
BU of 8sog by Molmil
Proteinase K Multiconformer Model at 313K
分子名称: CALCIUM ION, Proteinase K, SULFATE ION
著者Du, S, Wankowicz, S, Yabukarski, F, Doukov, T, Herschlag, D, Fraser, J.S.
登録日2023-04-28
公開日2023-08-09
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.13 Å)
主引用文献Refinement of multiconformer ensemble models from multi-temperature X-ray diffraction data.
Methods Enzymol., 688, 2023
3I04
DownloadVisualize
BU of 3i04 by Molmil
Cyanide-bound structure of bifunctional carbon monoxide dehydrogenase/acetyl-CoA synthase from Moorella thermoacetica, cyanide-bound C-cluster
分子名称: ACETATE ION, COPPER (I) ION, CYANIDE ION, ...
著者Kung, Y, Doukov, T.I, Drennan, C.L.
登録日2009-06-24
公開日2009-09-01
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Crystallographic snapshots of cyanide- and water-bound C-clusters from bifunctional carbon monoxide dehydrogenase/acetyl-CoA synthase.
Biochemistry, 48, 2009
3Q9A
DownloadVisualize
BU of 3q9a by Molmil
Structure of neuronal nitric oxide synthase in the ferric state in complex with N-5-[2-(ethylsulfanyl)ethanimidoyl]-L-ornithine
分子名称: 5,6,7,8-TETRAHYDROBIOPTERIN, ACETATE ION, Nitric oxide synthase, ...
著者Li, H, Doukov, T, Poulos, T.L.
登録日2011-01-07
公開日2011-05-18
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.24 Å)
主引用文献Temperature-dependent spin crossover in neuronal nitric oxide synthase bound with the heme-coordinating thioether inhibitors.
J.Am.Chem.Soc., 133, 2011
3I01
DownloadVisualize
BU of 3i01 by Molmil
Native structure of bifunctional carbon monoxide dehydrogenase/acetyl-CoA synthase from Moorella thermoacetica, water-bound C-cluster.
分子名称: ACETATE ION, COPPER (I) ION, Carbon monoxide dehydrogenase/acetyl-CoA synthase subunit alpha, ...
著者Kung, Y, Doukov, T.I, Drennan, C.L.
登録日2009-06-24
公開日2009-09-01
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Crystallographic snapshots of cyanide- and water-bound C-clusters from bifunctional carbon monoxide dehydrogenase/acetyl-CoA synthase.
Biochemistry, 48, 2009
3Q99
DownloadVisualize
BU of 3q99 by Molmil
Structure of neuronal nitric oxide synthase in the ferric state in complex with N~5~-[(3-(ethylsulfanyl)propanimidoyl]-L-ornithine
分子名称: 5,6,7,8-TETRAHYDROBIOPTERIN, ACETATE ION, Nitric oxide synthase, ...
著者Li, H, Doukov, T, Poulos, T.L.
登録日2011-01-07
公開日2011-05-18
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Temperature-dependent spin crossover in neuronal nitric oxide synthase bound with the heme-coordinating thioether inhibitors.
J.Am.Chem.Soc., 133, 2011
3SZG
DownloadVisualize
BU of 3szg by Molmil
Crystal structure of C176A glutamine-dependent NAD+ synthetase from M. tuberculosis bound to AMP/PPi and NaAD+
分子名称: ADENOSINE MONOPHOSPHATE, GLYCEROL, Glutamine-dependent NAD(+) synthetase, ...
著者Chuenchor, W, Doukov, T, Gerratana, B.
登録日2011-07-19
公開日2012-04-11
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Regulation of the intersubunit ammonia tunnel in Mycobacterium tuberculosis glutamine-dependent NAD+ synthetase.
Biochem.J., 443, 2012
2VZB
DownloadVisualize
BU of 2vzb by Molmil
A Dodecameric Thioferritin in the Bacterial Domain, Characterization of the Bacterioferritin-Related Protein from Bacteroides fragilis
分子名称: BENZAMIDINE, FE (III) ION, MAGNESIUM ION, ...
著者Gauss, G.H, Young, M.J, Douglas, T, Lawrence, C.M.
登録日2008-07-31
公開日2009-11-17
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Characterization of the Bacteroides Fragilis Bfr Gene Product Identifies a Bacterial Dps-Like Protein and Suggests Evolutionary Links in the Ferritin Superfamily.
J.Bacteriol., 194, 2012
4DJD
DownloadVisualize
BU of 4djd by Molmil
Crystal structure of folate-free corrinoid iron-sulfur protein (CFeSP) in complex with its methyltransferase (MeTr)
分子名称: 5-methyltetrahydrofolate corrinoid/iron sulfur protein methyltransferase, CALCIUM ION, COBALAMIN, ...
著者Kung, Y, Doukov, T.I, Blasiak, L.C, Drennan, C.L.
登録日2012-02-01
公開日2012-03-14
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献Visualizing molecular juggling within a B12-dependent methyltransferase complex.
Nature, 484, 2012
3EH4
DownloadVisualize
BU of 3eh4 by Molmil
Structure of the reduced form of cytochrome ba3 oxidase from Thermus thermophilus
分子名称: COPPER (I) ION, Cytochrome c oxidase polypeptide 2A, Cytochrome c oxidase subunit 1, ...
著者Liu, B, Chen, Y, Doukov, T, Soltis, S.M, Stout, D, Fee, J.A.
登録日2008-09-11
公開日2009-04-21
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Combined microspectrophotometric and crystallographic examination of chemically reduced and X-ray radiation-reduced forms of cytochrome ba3 oxidase from Thermus thermophilus: structure of the reduced form of the enzyme.
Biochemistry, 48, 2009
3EH3
DownloadVisualize
BU of 3eh3 by Molmil
Structure of the reduced form of cytochrome ba3 oxidase from Thermus thermophilus
分子名称: COPPER (I) ION, Cytochrome c oxidase polypeptide 2A, Cytochrome c oxidase subunit 1, ...
著者Liu, B, Chen, Y, Doukov, T, Soltis, S.M, Stout, D, Fee, J.A.
登録日2008-09-11
公開日2009-04-21
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Combined microspectrophotometric and crystallographic examination of chemically reduced and X-ray radiation-reduced forms of cytochrome ba3 oxidase from Thermus thermophilus: structure of the reduced form of the enzyme.
Biochemistry, 48, 2009
2CLB
DownloadVisualize
BU of 2clb by Molmil
The structure of the DPS-like protein from Sulfolobus solfataricus reveals a bacterioferritin-like di-metal binding site within a Dps- like dodecameric assembly
分子名称: DPS-LIKE PROTEIN, FE (III) ION, ZINC ION
著者Gauss, G.H, Benas, P, Wiedenheft, B, Young, M, Douglas, T, Lawrence, C.M.
登録日2006-04-26
公開日2006-07-17
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure of the Dps-Like Protein from Sulfolobus Solfataricus Reveals a Bacterioferritin-Like Dimetal Binding Site within a Dps-Like Dodecameric Assembly.
Biochemistry, 45, 2006
7LQA
DownloadVisualize
BU of 7lqa by Molmil
X-ray radiation damage series on Proteinase K at 277K, multi-conformer model, dataset 2 (merged)
分子名称: CALCIUM ION, Proteinase K, SULFATE ION
著者Yabukarski, F, Doukov, T, Herschlag, D.
登録日2021-02-13
公開日2022-02-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.02 Å)
主引用文献Evaluating the impact of X-ray damage on conformational heterogeneity in room-temperature (277 K) and cryo-cooled protein crystals.
Acta Crystallogr D Struct Biol, 78, 2022
7LK5
DownloadVisualize
BU of 7lk5 by Molmil
X-ray radiation damage series on Thaumatin at 277K, multi-conformer model, dataset 3
分子名称: L(+)-TARTARIC ACID, Thaumatin I
著者Yabukarski, F, Doukov, T, Herschlag, D.
登録日2021-02-01
公開日2022-02-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.38 Å)
主引用文献Evaluating the impact of X-ray damage on conformational heterogeneity in room-temperature (277 K) and cryo-cooled protein crystals.
Acta Crystallogr D Struct Biol, 78, 2022
7LND
DownloadVisualize
BU of 7lnd by Molmil
X-ray radiation damage series on Thaumatin at 277K, multi-conformer model, dataset 4 (merged)
分子名称: L(+)-TARTARIC ACID, Thaumatin I
著者Yabukarski, F, Doukov, T, Herschlag, D.
登録日2021-02-06
公開日2022-02-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.22 Å)
主引用文献Evaluating the impact of X-ray damage on conformational heterogeneity in room-temperature (277 K) and cryo-cooled protein crystals.
Acta Crystallogr D Struct Biol, 78, 2022
7LPU
DownloadVisualize
BU of 7lpu by Molmil
X-ray radiation damage series on Proteinase K at 277K, multi-conformer model, dataset 1
分子名称: CALCIUM ION, Proteinase K, SULFATE ION
著者Yabukarski, F, Doukov, T, Herschlag, D.
登録日2021-02-12
公開日2022-02-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.02 Å)
主引用文献Evaluating the impact of X-ray damage on conformational heterogeneity in room-temperature (277 K) and cryo-cooled protein crystals.
Acta Crystallogr D Struct Biol, 78, 2022
7LNC
DownloadVisualize
BU of 7lnc by Molmil
X-ray radiation damage series on Thaumatin at 277K, multi-conformer model, dataset 3 (merged)
分子名称: L(+)-TARTARIC ACID, Thaumatin I
著者Yabukarski, F, Doukov, T, Herschlag, D.
登録日2021-02-06
公開日2022-02-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.22 Å)
主引用文献Evaluating the impact of X-ray damage on conformational heterogeneity in room-temperature (277 K) and cryo-cooled protein crystals.
Acta Crystallogr D Struct Biol, 78, 2022
7LN7
DownloadVisualize
BU of 7ln7 by Molmil
X-ray radiation damage series on Proteinase K at 277K, crystal structure, dataset 1
分子名称: CALCIUM ION, Proteinase K, SULFATE ION
著者Yabukarski, F, Doukov, T, Herschlag, D.
登録日2021-02-06
公開日2022-02-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.02 Å)
主引用文献Evaluating the impact of X-ray damage on conformational heterogeneity in room-temperature (277 K) and cryo-cooled protein crystals.
Acta Crystallogr D Struct Biol, 78, 2022
7LFG
DownloadVisualize
BU of 7lfg by Molmil
X-ray radiation damage series on Thaumatin at 277K, crystal structure, dataset 1
分子名称: L(+)-TARTARIC ACID, Thaumatin I
著者Yabukarski, F, Doukov, T, Herschlag, D.
登録日2021-01-17
公開日2022-02-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.22 Å)
主引用文献Evaluating the impact of X-ray damage on conformational heterogeneity in room-temperature (277 K) and cryo-cooled protein crystals.
Acta Crystallogr D Struct Biol, 78, 2022
7LOQ
DownloadVisualize
BU of 7loq by Molmil
X-ray radiation damage series on Lysozyme at 277K, multi-conformer model, dataset 2
分子名称: CHLORIDE ION, Lysozyme C, SODIUM ION
著者Yabukarski, F, Doukov, T, Herschlag, D.
登録日2021-02-10
公開日2022-02-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Evaluating the impact of X-ray damage on conformational heterogeneity in room-temperature (277 K) and cryo-cooled protein crystals.
Acta Crystallogr D Struct Biol, 78, 2022
7LJV
DownloadVisualize
BU of 7ljv by Molmil
X-ray radiation damage series on Thaumatin at 277K, crystal structure, dataset 4
分子名称: L(+)-TARTARIC ACID, Thaumatin I
著者Yabukarski, F, Doukov, T, Herschlag, D.
登録日2021-01-31
公開日2022-02-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Evaluating the impact of X-ray damage on conformational heterogeneity in room-temperature (277 K) and cryo-cooled protein crystals.
Acta Crystallogr D Struct Biol, 78, 2022
7LN9
DownloadVisualize
BU of 7ln9 by Molmil
X-ray radiation damage series on Lysozyme at 277K, multi-conformer model, dataset 1
分子名称: CHLORIDE ION, Lysozyme C, SODIUM ION
著者Yabukarski, F, Doukov, T, Herschlag, D.
登録日2021-02-06
公開日2022-02-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.13 Å)
主引用文献Evaluating the impact of X-ray damage on conformational heterogeneity in room-temperature (277 K) and cryo-cooled protein crystals.
Acta Crystallogr D Struct Biol, 78, 2022
7LPV
DownloadVisualize
BU of 7lpv by Molmil
X-ray radiation damage series on Proteinase K at 277K, multi-conformer model, dataset 2
分子名称: CALCIUM ION, Proteinase K, SULFATE ION
著者Yabukarski, F, Doukov, T, Herschlag, D.
登録日2021-02-12
公開日2022-02-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Evaluating the impact of X-ray damage on conformational heterogeneity in room-temperature (277 K) and cryo-cooled protein crystals.
Acta Crystallogr D Struct Biol, 78, 2022
7LPL
DownloadVisualize
BU of 7lpl by Molmil
X-ray radiation damage series on Lysozyme at 277K, multi-conformer model, dataset 3 (merged)
分子名称: CHLORIDE ION, Lysozyme C, SODIUM ION
著者Yabukarski, F, Doukov, T, Herschlag, D.
登録日2021-02-12
公開日2022-02-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.14 Å)
主引用文献Evaluating the impact of X-ray damage on conformational heterogeneity in room-temperature (277 K) and cryo-cooled protein crystals.
Acta Crystallogr D Struct Biol, 78, 2022

222926

件を2024-07-24に公開中

PDB statisticsPDBj update infoContact PDBjnumon