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PDB: 177 件

5D8F
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crystal structure of SSB and ssDNA complex from homo sapiens
分子名称: DI(HYDROXYETHYL)ETHER, DNA (5'-D(P*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), SOSS complex subunit B1
著者Li, Y.H, Gao, Z.Q, Dong, Y.H.
登録日2015-08-17
公開日2016-08-17
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献crystal structure of SSB and ssDNA complex from homo sapiens
To Be Published
3OIX
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Crystal structure of the putative dihydroorotate dehydrogenase from Streptococcus mutans
分子名称: FLAVIN MONONUCLEOTIDE, GLYCEROL, Putative dihydroorotate dehydrogenase; dihydroorotate oxidase
著者Liu, Y, Gao, Z.Q, Liu, C.P, Dong, Y.H.
登録日2010-08-20
公開日2010-09-08
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.399 Å)
主引用文献Structure of the putative dihydroorotate dehydrogenase from Streptococcus mutans
Acta Crystallogr.,Sect.F, 67, 2011
5VGZ
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Conformational Landscape of the p28-Bound Human Proteasome Regulatory Particle
分子名称: 26S proteasome complex subunit SEM1, 26S proteasome non-ATPase regulatory subunit 1, 26S proteasome non-ATPase regulatory subunit 11, ...
著者Lu, Y, Wu, J, Dong, Y, Chen, S, Sun, S, Ma, Y.B, Ouyang, Q, Finley, D, Kirschner, M.W, Mao, Y.
登録日2017-04-12
公開日2017-08-23
最終更新日2023-08-16
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献Conformational Landscape of the p28-Bound Human Proteasome Regulatory Particle.
Mol. Cell, 67, 2017
2HVW
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Crystal structure of dCMP deaminase from Streptococcus mutans
分子名称: 1,4-DIETHYLENE DIOXIDE, 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, 3,4-DIHYDRO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE, ...
著者Hou, H.F, Gao, Z.Q, Li, L.F, Liang, Y.H, Su, X.D, Dong, Y.H.
登録日2006-07-31
公開日2007-09-11
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献Crystal structures of Streptococcus mutans 2'-deoxycytidylate deaminase and its complex with substrate analog and allosteric regulator dCTP x Mg2+.
J.Mol.Biol., 377, 2008
5FTE
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Crystal structure of Pif1 helicase from Bacteroides in complex with ADP-AlF3 and ssDNA
分子名称: 5'-D(*TP*TP*TP*TP*TP*TP)-3', ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, ...
著者Chen, W.-F, Dai, Y.-X, Duan, X.-L, Liu, N.-N, Shi, W, Li, M, Dou, S.-X, Li, N, Dong, Y.-H, Rety, S, Xi, X.-G.
登録日2016-01-12
公開日2016-02-03
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.19 Å)
主引用文献Crystal Structures of the Bspif1 Helicase Reveal that a Major Movement of the 2B SH3 Domain is Required for DNA Unwinding
Nucleic Acids Res., 44, 2016
5FTC
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Crystal structure of Pif1 helicase from Bacteroides in complex with ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, CALCIUM ION, TPR DOMAIN PROTEIN
著者Chen, W.-F, Dai, Y.-X, Duan, X.-L, Liu, N.-N, Shi, W, Li, M, Dou, S.-X, Li, N, Dong, Y.-H, Rety, S, Xi, X.-G.
登録日2016-01-12
公開日2016-02-03
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.269 Å)
主引用文献Crystal Structures of the Bspif1 Helicase Reveal that a Major Movement of the 2B SH3 Domain is Required for DNA Unwinding
Nucleic Acids Res., 44, 2016
5HW4
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Crystal structure of Escherichia coli 16S rRNA methyltransferase RsmI in complex with AdoMet
分子名称: Ribosomal RNA small subunit methyltransferase I, S-ADENOSYLMETHIONINE
著者Zhao, M, Zhang, H, Dong, Y, Gong, Y.
登録日2016-01-28
公開日2016-10-19
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.211 Å)
主引用文献Structural Insights into the Methylation of C1402 in 16S rRNA by Methyltransferase RsmI
Plos One, 11, 2016
5FTD
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Crystal structure of Pif1 helicase from Bacteroides apo form
分子名称: PHOSPHATE ION, TPR DOMAIN PROTEIN
著者Chen, W.-F, Dai, Y.-X, Duan, X.-L, Liu, N.-N, Shi, W, Li, M, Dou, S.-X, Li, N, Dong, Y.-H, Rety, S, Xi, X.-G.
登録日2016-01-12
公開日2016-02-03
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.695 Å)
主引用文献Crystal Structures of the Bspif1 Helicase Reveal that a Major Movement of the 2B SH3 Domain is Required for DNA Unwinding
Nucleic Acids Res., 44, 2016
5FTF
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Crystal structure of Pif1 helicase from Bacteroides double mutant L95C-I339C
分子名称: ADENOSINE-5'-DIPHOSPHATE, TPR DOMAIN PROTEIN
著者Chen, W.-F, Dai, Y.-X, Duan, X.-L, Liu, N.-N, Shi, W, Li, M, Dou, S.-X, Li, N, Dong, Y.-H, Rety, S, Xi, X.-G.
登録日2016-01-13
公開日2016-02-03
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.412 Å)
主引用文献Crystal Structures of the Bspif1 Helicase Reveal that a Major Movement of the 2B SH3 Domain is Required for DNA Unwinding
Nucleic Acids Res., 44, 2016
5XWX
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Crystal structure of the four N-terminal immunoglogulin domains of Sidekick-1 protein
分子名称: Protein sidekick-1
著者Tang, H, Dong, Y, He, Y.
登録日2017-06-30
公開日2018-08-29
最終更新日2018-09-26
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Architecture of cell-cell adhesion mediated by sidekicks.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
4JUR
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Crystal structure of the effector Tae4 from Salmonella typhimurium in complex with the immunity Tai4 from Enterobacter cloacae
分子名称: Putative cytoplasmic protein, Uncharacterized protein
著者Zhang, H, Gao, Z.Q, Dong, Y.H.
登録日2013-03-25
公開日2014-02-05
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Insights into the cross-immunity mechanism within effector families of bacteria type VI secretion system from the structure of StTae4-EcTai4 complex
Plos One, 8, 2013
5FTB
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Crystal structure of Pif1 helicase from Bacteroides in complex with AMPPNP
分子名称: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, POTASSIUM ION, ...
著者Chen, W.-F, Dai, Y.-X, Duan, X.-L, Liu, N.-N, Shi, W, Li, M, Dou, S.-X, Li, N, Dong, Y.-H, Rety, S, Xi, X.-G.
登録日2016-01-12
公開日2016-02-03
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.38 Å)
主引用文献Crystal Structures of the Bspif1 Helicase Reveal that a Major Movement of the 2B SH3 Domain is Required for DNA Unwinding
Nucleic Acids Res., 44, 2016
5I8J
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Crystal structure of Dmd from phage RB69
分子名称: Dmd discriminator of mRNA degradation
著者Wei, Y, Zhang, H, Gao, Z.Q, Dong, Y.H.
登録日2016-02-19
公開日2017-02-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structural characterizations of phage antitoxin Dmd and its interactions with bacterial toxin RnlA
Biochem. Biophys. Res. Commun., 472, 2016
2HVV
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BU of 2hvv by Molmil
Crystal structure of dCMP deaminase from Streptococcus mutans
分子名称: SULFATE ION, ZINC ION, deoxycytidylate deaminase
著者Hou, H.F, Gao, Z.Q, Li, L.F, Liang, Y.H, Su, X.D, Dong, Y.H.
登録日2006-07-31
公開日2007-09-11
最終更新日2017-10-18
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal structures of Streptococcus mutans 2'-deoxycytidylate deaminase and its complex with substrate analog and allosteric regulator dCTP x Mg2+.
J.Mol.Biol., 377, 2008
5YIM
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Structure of a Legionella effector
分子名称: SdeA
著者Feng, Y, Dong, Y, Wang, W.
登録日2017-10-05
公開日2018-05-30
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (3.394 Å)
主引用文献Structural basis of ubiquitin modification by the Legionella effector SdeA.
Nature, 557, 2018
5YIK
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Structure of a Legionella effector with its substrate
分子名称: SdeA, ubiquitin
著者Feng, Y, Dong, Y, Liu, Z.
登録日2017-10-05
公開日2018-05-30
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.102 Å)
主引用文献Structural basis of ubiquitin modification by the Legionella effector SdeA.
Nature, 557, 2018
5HY3
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Crystal structure of Escherichia coli toxin LsoA in complex with T4 phage antitoxin Dmd
分子名称: Antitoxin Dmd, mRNA endoribonuclease LsoA
著者Wan, H, Gao, Z.Q, Dong, Y.H.
登録日2016-02-01
公開日2016-06-22
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structural insights into the inhibition mechanism of bacterial toxin LsoA by bacteriophage antitoxin Dmd
Mol.Microbiol., 101, 2016
2G0J
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Crystal structure of SMU.848 from Streptococcus mutans
分子名称: hypothetical protein SMU.848
著者Hou, H.-F, Gao, Z.-Q, Li, L.-F, Liang, Y.-H, Su, X.-D, Dong, Y.-H.
登録日2006-02-13
公開日2006-08-08
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of SMU.848 from Streptococcus mutans
To be Published
5ID3
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Solution structure of the pore-forming region of C. elegans Mitochondrial Calcium Uniporter (MCU)
分子名称: Mitochondrial Calcium Uniporter
著者Oxenoid, K, Dong, Y, Cao, C, Cui, T, Sancak, Y, Markhard, A.L, Grabarek, Z, Kong, L, Liu, Z, Ouyang, B, Cong, Y, Mootha, V.K, Chou, J.J, Membrane Protein Structures by Solution NMR (MPSbyNMR)
登録日2016-02-23
公開日2016-05-04
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Architecture of the mitochondrial calcium uniporter.
Nature, 533, 2016
4I8O
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Crystal structure of the toxin RnlA from Escherichia coli
分子名称: TOXIN RNLA
著者Wei, Y, Gao, Z.Q, Zhang, H, Dong, Y.H.
登録日2012-12-04
公開日2013-10-23
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.104 Å)
主引用文献Structure-function studies of Escherichia coli RnlA reveal a novel toxin structure involved in bacteriophage resistance.
Mol.Microbiol., 90, 2013
3Q9S
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Crystal structure of rra(1-215) from Deinococcus Radiodurans
分子名称: DNA-binding response regulator
著者Liu, Y, Gao, Z.Q, Dong, Y.H, Ji, C.N.
登録日2011-01-09
公開日2012-01-11
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of rra(1-215) from Deinococcus Radiodurans
To be Published
7WLK
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CryoEM structure of human low-voltage activated T-type calcium channel Cav3.3 in complex with Otilonium Bromide(OB)
分子名称: 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2-[diethyl(methyl)-$l^{4}-azanyl]ethyl 4-[(2-octoxyphenyl)carbonylamino]benzoate, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者He, L, Yu, Z, Dong, Y, Chen, Q, Zhao, Y.
登録日2022-01-13
公開日2022-05-04
最終更新日2022-05-25
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structure, gating, and pharmacology of human Ca V 3.3 channel.
Nat Commun, 13, 2022
7WLL
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CryoEM structure of human low-voltage activated T-type calcium channel Cav3.3 in complex with pimozide(PMZ)
分子名称: 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2-acetamido-2-deoxy-beta-D-glucopyranose, 3-[1-[4,4-bis(4-fluorophenyl)butyl]piperidin-4-yl]-1~{H}-benzimidazol-2-one, ...
著者He, L, Yu, Z, Dong, Y, Chen, Q, Zhao, Y.
登録日2022-01-13
公開日2022-05-04
最終更新日2022-05-25
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structure, gating, and pharmacology of human Ca V 3.3 channel.
Nat Commun, 13, 2022
7WLJ
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CryoEM structure of human low-voltage activated T-type calcium channel Cav3.3 in complex with mibefradil (MIB)
分子名称: (1S,2S)-2-(2-{[3-(1H-benzimidazol-2-yl)propyl](methyl)amino}ethyl)-6-fluoro-1-(propan-2-yl)-1,2,3,4-tetrahydronaphthalen-2-yl methoxyacetate, 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者He, L, Yu, Z, Dong, Y, Chen, Q, Zhao, Y.
登録日2022-01-13
公開日2022-05-04
最終更新日2022-05-25
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Structure, gating, and pharmacology of human Ca V 3.3 channel.
Nat Commun, 13, 2022
7WLI
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CryoEM structure of human low-voltage activated T-type calcium channel CaV3.3 (apo)
分子名称: 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者He, L, Yu, Z, Dong, Y, Chen, Q, Zhao, Y.
登録日2022-01-13
公開日2022-05-04
最終更新日2024-10-30
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structure, gating, and pharmacology of human Ca V 3.3 channel.
Nat Commun, 13, 2022

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