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PDB: 97 件

3PB2
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BU of 3pb2 by Molmil
Characterisation of the first monomeric dihydrodipicolinate synthase variant reveals evolutionary insights
分子名称: Dihydrodipicolinate synthase, GLYCEROL
著者Pearce, F.G, Dobson, R.C.J, Jameson, G.B.
登録日2010-10-20
公開日2011-11-23
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Characterization of monomeric dihydrodipicolinate synthase variant reveals the importance of substrate binding in optimizing oligomerization.
Biochim.Biophys.Acta, 1814, 2011
3WAL
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BU of 3wal by Molmil
Crystal structure of human LC3A_2-121
分子名称: D-MALATE, Microtubule-associated proteins 1A/1B light chain 3A
著者Suzuki, H, Tabata, K, Morita, E, Kawasaki, M, Kato, R, Dobson, R.C.J, Yoshimori, T, Wakatsuki, S.
登録日2013-05-06
公開日2013-12-25
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis of the autophagy-related LC3/Atg13 LIR complex: recognition and interaction mechanism.
Structure, 22, 2014
3WAO
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BU of 3wao by Molmil
Crystal structure of Atg13 LIR-fused human LC3B_2-119
分子名称: Autophagy-related protein 13, Microtubule-associated proteins 1A/1B light chain 3B
著者Suzuki, H, Tabata, K, Morita, E, Kawasaki, M, Kato, R, Dobson, R.C.J, Yoshimori, T, Wakatsuki, S.
登録日2013-05-06
公開日2013-12-25
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural basis of the autophagy-related LC3/Atg13 LIR complex: recognition and interaction mechanism.
Structure, 22, 2014
3WAN
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BU of 3wan by Molmil
Crystal structure of Atg13 LIR-fused human LC3A_2-121
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Autophagy-related protein 13, Microtubule-associated proteins 1A/1B light chain 3A
著者Suzuki, H, Tabata, K, Morita, E, Kawasaki, M, Kato, R, Dobson, R.C.J, Yoshimori, T, Wakatsuki, S.
登録日2013-05-06
公開日2013-12-25
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Structural basis of the autophagy-related LC3/Atg13 LIR complex: recognition and interaction mechanism.
Structure, 22, 2014
3WAM
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BU of 3wam by Molmil
Crystal structure of human LC3C_8-125
分子名称: CITRIC ACID, Microtubule-associated proteins 1A/1B light chain 3C
著者Suzuki, H, Tabata, K, Morita, E, Kawasaki, M, Kato, R, Dobson, R.C.J, Yoshimori, T, Wakatsuki, S.
登録日2013-05-06
公開日2013-12-25
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structural basis of the autophagy-related LC3/Atg13 LIR complex: recognition and interaction mechanism.
Structure, 22, 2014
3WAP
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BU of 3wap by Molmil
Crystal structure of Atg13 LIR-fused human LC3C_8-125
分子名称: Autophagy-related protein 13, Microtubule-associated proteins 1A/1B light chain 3C
著者Suzuki, H, Tabata, K, Morita, E, Kawasaki, M, Kato, R, Dobson, R.C.J, Yoshimori, T, Wakatsuki, S.
登録日2013-05-06
公開日2013-12-25
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structural basis of the autophagy-related LC3/Atg13 LIR complex: recognition and interaction mechanism.
Structure, 22, 2014
2OJP
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BU of 2ojp by Molmil
The crystal structure of a dimeric mutant of Dihydrodipicolinate synthase from E.coli- DHDPS-L197Y
分子名称: Dihydrodipicolinate synthase, GLYCEROL
著者Griffin, M.D.W, Dobson, R.C.J, Antonio, L, Perugini, M.A, Jameson, G.B, Gerrard, J.A.
登録日2007-01-13
公開日2008-01-01
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Evolution of quaternary structure in a homotetrameric enzyme.
J.Mol.Biol., 380, 2008
6Q26
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BU of 6q26 by Molmil
N-Acetylmannosamine kinase from Staphylococcus aureus
分子名称: Glucokinase
著者Coombes, D, North, R.A, Dobson, R.C.J.
登録日2019-08-07
公開日2020-01-22
最終更新日2020-03-18
実験手法X-RAY DIFFRACTION (2.328 Å)
主引用文献The basis for non-canonical ROK family function in theN-acetylmannosamine kinase from the pathogenStaphylococcus aureus.
J.Biol.Chem., 295, 2020
6Q27
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BU of 6q27 by Molmil
N-acetylmannosamine kinase with N-acetylmannosamine from Staphylococcus aureus
分子名称: 2-acetamido-2-deoxy-alpha-D-mannopyranose, Glucokinase
著者Coombes, D, Horne, C.R, Davies, J.S, Dobson, R.C.J.
登録日2019-08-07
公開日2020-01-22
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The basis for non-canonical ROK family function in theN-acetylmannosamine kinase from the pathogenStaphylococcus aureus.
J.Biol.Chem., 295, 2020
6Q28
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Metal ROK rebel: Characterisation of N-acetylmannosamine kinase from the pathogen Staphylococcus aureus
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, N-acetylmannosamine kinase
著者Coombes, D, Horne, C.R, Dobson, R.C.J.
登録日2019-08-07
公開日2020-01-22
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The basis for non-canonical ROK family function in theN-acetylmannosamine kinase from the pathogenStaphylococcus aureus.
J.Biol.Chem., 295, 2020
4DPQ
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The structure of dihydrodipicolinate synthase 2 from Arabidopsis thaliana in complex with (S)-lysine
分子名称: Dihydrodipicolinate synthase 2, chloroplastic, LYSINE, ...
著者Griffin, M.D.W, Billakanti, J.M, Gerrard, J.A, Dobson, R.C.J, Pearce, F.G.
登録日2012-02-14
公開日2012-07-18
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.202 Å)
主引用文献Characterisation of the first enzymes committed to lysine biosynthesis in Arabidopsis thaliana
Plos One, 7, 2012
4C1K
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Crystal structure of pyrococcus furiosus 3-deoxy-D-arabino- heptulosonate 7-phosphate synthase
分子名称: 2-DEHYDRO-3-DEOXYPHOSPHOHEPTONATE ALDOLASE, CADMIUM ION, CARBONATE ION, ...
著者Nazmi, A.R, Schofield, L.R, Dobson, R.C.J, Jameson, G.B, Parker, E.J.
登録日2013-08-13
公開日2013-11-20
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Destabilization of the Homotetrameric Assembly of 3-Deoxy-D-Arabino-Heptulosonate 7-Phosphate Synthase from the Hyperthermophile Pyrococcus Furiosus Enhances Enzymatic Activity
J.Mol.Biol., 426, 2014
3PG8
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Truncated form of 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase from Thermotoga maritima
分子名称: AZIDE ION, GLYCEROL, Phospho-2-dehydro-3-deoxyheptonate aldolase
著者Cross, P.J, Dobson, R.C.J, Patchett, M.L, Parker, E.J.
登録日2010-10-31
公開日2011-01-26
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Tyrosine latching of a regulatory gate affords allosteric control of aromatic amino acid biosynthesis
J.Biol.Chem., 286, 2011
3PG9
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BU of 3pg9 by Molmil
Thermotoga maritima DAH7P synthase in complex with inhibitor
分子名称: AZIDE ION, CHLORIDE ION, NITRATE ION, ...
著者Cross, P.J, Dobson, R.C.J, Patchett, M.L, Parker, E.J.
登録日2010-10-31
公開日2011-01-26
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Tyrosine latching of a regulatory gate affords allosteric control of aromatic amino acid biosynthesis
J.Biol.Chem., 286, 2011
4DPP
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BU of 4dpp by Molmil
The structure of dihydrodipicolinate synthase 2 from Arabidopsis thaliana
分子名称: Dihydrodipicolinate synthase 2, chloroplastic, SODIUM ION
著者Griffin, M.D.W, Billakanti, J.M, Gerrard, J.A, Dobson, R.C.J, Pearce, F.G.
登録日2012-02-14
公開日2012-07-18
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Characterisation of the first enzymes committed to lysine biosynthesis in Arabidopsis thaliana
Plos One, 7, 2012
3HIJ
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BU of 3hij by Molmil
Crystal structure of dihydrodipicolinate synthase from Bacillus anthracis in complex with its substrate, pyruvate
分子名称: Dihydrodipicolinate synthase, GLYCEROL, SODIUM ION
著者Voss, J.E, Scally, S.W, Dobson, R.C.J, Perugini, M.A.
登録日2009-05-20
公開日2009-11-24
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Substrate-mediated Stabilization of a Tetrameric Drug Target Reveals Achilles Heel in Anthrax.
J.Biol.Chem., 285, 2010
6N2A
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BU of 6n2a by Molmil
Meso-Diaminopimelate Decarboxylase from Arabidopsis thaliana (Isoform 1)
分子名称: Diaminopimelate decarboxylase 1, chloroplastic, LYSINE, ...
著者Crowther, J.M, Dobson, R.C.J.
登録日2018-11-12
公開日2019-04-24
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Active site gating provides stereochemical control for meso-diaminopimelate decarboxylase
To Be Published
6N2F
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BU of 6n2f by Molmil
Meso-Diaminopimelate Decarboxylase from Arabidopsis thaliana (Isoform 2)
分子名称: Diaminopimelate decarboxylase 2, chloroplastic, LYSINE, ...
著者Crowther, J.M, Dobson, R.C.J.
登録日2018-11-12
公開日2019-04-24
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.27 Å)
主引用文献Active site gating provides stereochemical control for meso-diaminopimelate decarboxylase
To Be Published
2ATS
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BU of 2ats by Molmil
Dihydrodipicolinate synthase co-crystallised with (S)-lysine
分子名称: CHLORIDE ION, D-LYSINE, POTASSIUM ION, ...
著者Devenish, S.R.A, Dobson, R.C.J, Jameson, G.B, Gerrard, J.A.
登録日2005-08-26
公開日2006-09-19
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The co-crystallisation of (S)-lysine-bound dihydrodipicolinate synthase from E. coli indicates that domain movements are not responsible for (S)-lysine inhibition
To be published
7LOY
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BU of 7loy by Molmil
Dihydrodipicolinate synthase with pyruvate from Candidatus Liberibacter solanacearum
分子名称: 4-hydroxy-tetrahydrodipicolinate synthase
著者Gilkes, J.M, Frampton, R.A, Board, A, Sheen, C.R, Smith, G.R, Dobson, R.C.J.
登録日2021-02-11
公開日2021-03-03
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Dihydrodipicolinate synthase with pyruvate from the plant pathogen, Candidatus Liberibacter solanacearum
To Be Published
5DPT
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BU of 5dpt by Molmil
Crystal structure of PLEKHM1 LIR-fused human GABARAPL1_2-117
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Pleckstrin homology domain-containing family M member 1, Gamma-aminobutyric acid receptor-associated protein-like 1,Gamma-aminobutyric acid receptor-associated protein-like 1
著者Ravichandran, A.C, Suzuki, H, Dobson, R.C.J.
登録日2015-09-14
公開日2016-09-28
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural and functional analysis of the GABARAP interaction motif (GIM).
EMBO Rep., 18, 2017
5DPS
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BU of 5dps by Molmil
Crystal structure of PLEKHM1 LIR-fused human GABARAP_2-117
分子名称: Pleckstrin homology domain-containing family M member 1,Gamma-aminobutyric acid receptor-associated protein
著者Ravichandran, A.C, Suzuki, H, Dobson, R.C.J.
登録日2015-09-14
公開日2016-09-28
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural and functional analysis of the GABARAP interaction motif (GIM).
EMBO Rep., 18, 2017
7JZB
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BU of 7jzb by Molmil
Dihydrodipicolinate synthase S48W with lysine in the allosteric site, and pyruvate and succinic semi-aldehyde
分子名称: 4-hydroxy-tetrahydrodipicolinate synthase, LYSINE, POTASSIUM ION
著者Board, A.J, Dobson, R.C.J.
登録日2020-09-01
公開日2021-09-22
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Mapping the uncharted water channel of DHDPS
To Be Published
7JZC
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BU of 7jzc by Molmil
Dihydrodipicolinate synthase S48W mutant with lysine in the allosteric site, and pyruvate in the catalytic site
分子名称: 4-hydroxy-tetrahydrodipicolinate synthase, POTASSIUM ION
著者Board, A.J, Dobson, R.C.J.
登録日2020-09-02
公開日2021-09-22
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献Mapping the uncharted water channel of DHDPS
To Be Published
7JZD
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BU of 7jzd by Molmil
Dihydrodipicolinate synthase mutation S48W with Lysine in the allosteric site
分子名称: 4-hydroxy-tetrahydrodipicolinate synthase, GLYCEROL, POTASSIUM ION
著者Board, A.J, Dobson, R.C.J.
登録日2020-09-02
公開日2021-09-22
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Mapping the uncharted water channel of DHDPS
To Be Published

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件を2024-07-17に公開中

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