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PDB: 101 件
4YNG
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BU of 4yng by Molmil
Twinned pyruvate kinase from E. coli in the T-state
分子名称: Pyruvate kinase I, SULFATE ION
著者Donovan, K.A, Dobson, R.C.J.
登録日2015-03-10
公開日2015-03-25
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Grappling with anisotropic data, pseudo-merohedral twinning and pseudo-translational noncrystallographic symmetry: a case study involving pyruvate kinase.
Acta Crystallogr D Struct Biol, 72, 2016
4TLJ
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BU of 4tlj by Molmil
Ultra-high resolution crystal structure of caprine Beta-lactoglobulin
分子名称: 1,4-BUTANEDIOL, Beta-lactoglobulin
著者Crowther, J.M, Jameson, G.B, Suzuki, H, Dobson, R.C.J.
登録日2014-05-30
公開日2014-06-18
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.17 Å)
主引用文献Ultra-high resolution crystal structure of recombinant caprine beta-lactoglobulin.
Febs Lett., 588, 2014
7RUM
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BU of 7rum by Molmil
Endolysin from Escherichia coli O157:H7 phage FTEbC1, LysT84
分子名称: Endolysin, GLYCEROL
著者Love, M.J, Billington, C, Dobson, R.C.J.
登録日2021-08-17
公開日2022-02-09
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.99 Å)
主引用文献The structure and function of modular Escherichia coli O157:H7 bacteriophage FTBEc1 endolysin, LysT84: defining a new endolysin catalytic subfamily.
Biochem.J., 479, 2022
5DPS
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BU of 5dps by Molmil
Crystal structure of PLEKHM1 LIR-fused human GABARAP_2-117
分子名称: Pleckstrin homology domain-containing family M member 1,Gamma-aminobutyric acid receptor-associated protein
著者Ravichandran, A.C, Suzuki, H, Dobson, R.C.J.
登録日2015-09-14
公開日2016-09-28
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural and functional analysis of the GABARAP interaction motif (GIM).
EMBO Rep., 18, 2017
6Q26
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BU of 6q26 by Molmil
N-Acetylmannosamine kinase from Staphylococcus aureus
分子名称: Glucokinase
著者Coombes, D, North, R.A, Dobson, R.C.J.
登録日2019-08-07
公開日2020-01-22
最終更新日2020-03-18
実験手法X-RAY DIFFRACTION (2.328 Å)
主引用文献The basis for non-canonical ROK family function in theN-acetylmannosamine kinase from the pathogenStaphylococcus aureus.
J.Biol.Chem., 295, 2020
5DPR
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BU of 5dpr by Molmil
Crystal structure of PLEKHM1 LIR-fused human LC3A_2-121
分子名称: Pleckstrin homology domain-containing family M member 1,Microtubule-associated proteins 1A/1B light chain 3A
著者Ravichandran, A.C, Suzuki, H, Dobson, R.C.J.
登録日2015-09-14
公開日2016-09-28
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural and functional analysis of the GABARAP interaction motif (GIM).
EMBO Rep., 18, 2017
6Q27
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BU of 6q27 by Molmil
N-acetylmannosamine kinase with N-acetylmannosamine from Staphylococcus aureus
分子名称: 2-acetamido-2-deoxy-alpha-D-mannopyranose, Glucokinase
著者Coombes, D, Horne, C.R, Davies, J.S, Dobson, R.C.J.
登録日2019-08-07
公開日2020-01-22
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The basis for non-canonical ROK family function in theN-acetylmannosamine kinase from the pathogenStaphylococcus aureus.
J.Biol.Chem., 295, 2020
6Q28
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BU of 6q28 by Molmil
Metal ROK rebel: Characterisation of N-acetylmannosamine kinase from the pathogen Staphylococcus aureus
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, N-acetylmannosamine kinase
著者Coombes, D, Horne, C.R, Dobson, R.C.J.
登録日2019-08-07
公開日2020-01-22
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The basis for non-canonical ROK family function in theN-acetylmannosamine kinase from the pathogenStaphylococcus aureus.
J.Biol.Chem., 295, 2020
5DPW
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BU of 5dpw by Molmil
Crystal structure of PLEKHM1 LIR in complex with human LC3C_8-125
分子名称: Microtubule-associated proteins 1A/1B light chain 3C, Pleckstrin homology domain-containing family M member 1
著者Ravichandran, A.C, Suzuki, H, Dobson, R.C.J.
登録日2015-09-14
公開日2016-09-28
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.185 Å)
主引用文献Structural and functional analysis of the GABARAP interaction motif (GIM).
EMBO Rep., 18, 2017
4OY5
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BU of 4oy5 by Molmil
0.89 Angstrom resolution crystal structure of (Gly-Pro-Hyp)10
分子名称: Collagen
著者Suzuki, H, Mahapatra, D, Steel, P.J, Dyer, J, Dobson, R.C.J, Gerrard, J.A, Valery, C.
登録日2014-02-10
公開日2015-03-04
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (0.89 Å)
主引用文献Sub-angstrom structure of the collagen model peptide (GPO)10 shows a hydrated triple helix with pitch variation and two proline ring conformations
To Be Published
3A5F
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BU of 3a5f by Molmil
High-resolution structure of DHDPS from Clostridium botulinum in complex with pyruvate
分子名称: Dihydrodipicolinate synthase, GLYCEROL
著者Atkinson, S.C, Dobson, R.C.J, Perugini, M.A.
登録日2009-08-06
公開日2010-06-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.19 Å)
主引用文献The high resolution structure of DHDPS from Clostridium botulinum
To be Published
4Z4B
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BU of 4z4b by Molmil
2-Pyridyl Hoechst - a New Generation DNA-Binding Radioprotector
分子名称: 5-(4-methylpiperazin-1-yl)-2'-(pyridin-2-yl)-1H,1'H-2,5'-bibenzimidazole, DNA (5'-D(*CP*GP*CP*AP*AP*AP*TP*TP*TP*GP*CP*G)-3'), MAGNESIUM ION
著者Wee, J.-Y, Dobson, R.C.J, White, J.M.
登録日2015-04-01
公開日2016-05-04
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.9652 Å)
主引用文献2-Pyridyl Hoechst - a New Generation DNA-Binding Radioprotector
To Be Published
8THJ
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BU of 8thj by Molmil
Cryo-EM structure of the Tripartite ATP-independent Periplasmic (TRAP) transporter SiaQM from Haemophilus influenzae (antiparallel dimer)
分子名称: (1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, PHOSPHATIDYLETHANOLAMINE, SODIUM ION, ...
著者Davies, J.S, Currie, M.C, Dobson, R.C.J, North, R.A.
登録日2023-07-16
公開日2023-11-22
最終更新日2024-02-28
実験手法ELECTRON MICROSCOPY (2.99 Å)
主引用文献Structural and biophysical analysis of a Haemophilus influenzae tripartite ATP-independent periplasmic (TRAP) transporter.
Elife, 12, 2024
8THI
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BU of 8thi by Molmil
Cryo-EM structure of the Tripartite ATP-independent Periplasmic (TRAP) transporter SiaQM from Haemophilus influenzae (parallel dimer)
分子名称: (1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, SODIUM ION, Sialic acid TRAP transporter permease protein SiaT
著者Davies, J.S, Currie, M.C, Dobson, R.C.J, North, R.A.
登録日2023-07-16
公開日2023-11-22
最終更新日2024-02-28
実験手法ELECTRON MICROSCOPY (3.36 Å)
主引用文献Structural and biophysical analysis of a Haemophilus influenzae tripartite ATP-independent periplasmic (TRAP) transporter.
Elife, 12, 2024
8EDQ
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BU of 8edq by Molmil
E. coli pyruvate kinase (PykF) I264F
分子名称: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Pyruvate kinase, SULFATE ION
著者Donovan, K.A, Coombes, D, Dobson, R.C.J, Cooper, T.F.
登録日2022-09-05
公開日2022-11-16
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.88 Å)
主引用文献Beneficial mutations occurring in E. coli pyruvate kinase afford new allosteric mechanisms leading to faster resumption of growth
To Be Published
8EDR
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BU of 8edr by Molmil
E. coli pyruvate kinase (PykF) P70Q
分子名称: Pyruvate kinase, SULFATE ION
著者Donovan, K.A, Coombes, D, Dobson, R.C.J, Cooper, T.F.
登録日2022-09-05
公開日2022-11-16
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.64 Å)
主引用文献Beneficial mutations occurring in E. coli pyruvate kinase afford new allosteric mechanisms leading to faster resumption of growth
To Be Published
8EDT
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BU of 8edt by Molmil
E. coli Pyruvate kinase (PykF) T462I
分子名称: Pyruvate kinase
著者Donovan, K.A, Coombes, D, Dobson, R.C.J, Cooper, T.F.
登録日2022-09-05
公開日2022-11-16
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Beneficial mutations occurring in E. coli pyruvate kinase afford new allosteric mechanisms leading to faster resumption of growth
To Be Published
8EDS
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BU of 8eds by Molmil
Escherichia coli pyruvate kinase (PykF) P70Q
分子名称: Pyruvate kinase, SULFATE ION
著者Donovan, K.A, Coombes, D, Dobson, R.C.J, Cooper, T.F.
登録日2022-09-05
公開日2022-11-16
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Beneficial mutations occurring in E. coli pyruvate kinase afford new allosteric mechanisms leading to faster resumption of growth
To Be Published
8EQ0
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BU of 8eq0 by Molmil
Escherichia coli pyruvate kinase G381A
分子名称: GLYCINE, Pyruvate kinase
著者Donovan, K.A, Coombes, D, Dobson, R.C.J, Cooper, T.F.
登録日2022-10-07
公開日2023-01-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.62 Å)
主引用文献Beneficial mutations occurring in E. coli pyruvate kinase afford new allosteric mechanisms leading to faster resumption of growth
To Be Published
8EQ1
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BU of 8eq1 by Molmil
Escherichia coli pyruvate kinase D127N
分子名称: Pyruvate kinase, SULFATE ION
著者Donovan, K.A, Coombes, D, Dobson, R.C.J, Cooper, T.F.
登録日2022-10-07
公開日2023-01-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.32 Å)
主引用文献Beneficial mutations occurring in E. coli pyruvate kinase afford new allosteric mechanisms leading to faster resumption of growth
To Be Published
8EQ3
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BU of 8eq3 by Molmil
Escherichia coli pyruvate kinase A301T
分子名称: IMIDAZOLE, MALONATE ION, Pyruvate kinase, ...
著者Donovan, K.A, Coombes, D, Dobson, R.C.J, Cooper, T.F.
登録日2022-10-07
公開日2023-01-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Beneficial mutations occurring in E. coli pyruvate kinase afford new allosteric mechanisms leading to faster resumption of growth
To Be Published
8EU4
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BU of 8eu4 by Molmil
Escherichia coli pyruvate kinase A301S
分子名称: Pyruvate kinase, SULFATE ION
著者Donovan, K.A, Coombes, D, Dobson, R.C.J, Cooper, T.F.
登録日2022-10-18
公開日2023-01-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Beneficial mutations occurring in E. coli pyruvate kinase afford new allosteric mechanisms leading to faster resumption of growth
To Be Published
3PB0
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BU of 3pb0 by Molmil
Characterisation of the first monomeric dihydrodipicolinate synthase variant reveals evolutionary insights
分子名称: Dihydrodipicolinate synthase, SULFATE ION
著者Pearce, F.G, Dobson, R.C.J, Jameson, G.B.
登録日2010-10-19
公開日2011-11-23
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Characterization of monomeric dihydrodipicolinate synthase variant reveals the importance of substrate binding in optimizing oligomerization.
Biochim.Biophys.Acta, 1814, 2011
3PB2
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BU of 3pb2 by Molmil
Characterisation of the first monomeric dihydrodipicolinate synthase variant reveals evolutionary insights
分子名称: Dihydrodipicolinate synthase, GLYCEROL
著者Pearce, F.G, Dobson, R.C.J, Jameson, G.B.
登録日2010-10-20
公開日2011-11-23
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Characterization of monomeric dihydrodipicolinate synthase variant reveals the importance of substrate binding in optimizing oligomerization.
Biochim.Biophys.Acta, 1814, 2011
8T9T
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BU of 8t9t by Molmil
Apo Crystal Structure of a Substrate Binding Protein (IseP) from an Isethionate TRAP Transporter
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Isethionate-binding periplasmic protein DctP
著者Newton-Vesty, M.C, Dobson, R.C.J.
登録日2023-06-25
公開日2024-06-26
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Isethionate TRAP transporter substrate binding protein structure and function
To Be Published

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件を2024-10-16に公開中

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