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PDB: 219 results

3L5M
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BU of 3l5m by Molmil
Xenobiotic reductase A - coumarin bound
Descriptor: (R,R)-2,3-BUTANEDIOL, COUMARIN, FLAVIN MONONUCLEOTIDE, ...
Authors:Spiegelhauer, O, Dobbek, H.
Deposit date:2009-12-22
Release date:2010-03-23
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Cysteine as a modulator residue in the active site of xenobiotic reductase A: a structural, thermodynamic and kinetic study
J.Mol.Biol., 398, 2010
3L67
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BU of 3l67 by Molmil
Xenobiotic reductase A - C25S variant
Descriptor: (R,R)-2,3-BUTANEDIOL, FLAVIN MONONUCLEOTIDE, SULFATE ION, ...
Authors:Spiegelhauer, O, Dobbek, H.
Deposit date:2009-12-23
Release date:2010-03-23
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Cysteine as a modulator residue in the active site of xenobiotic reductase A: a structural, thermodynamic and kinetic study
J.Mol.Biol., 398, 2010
3L65
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BU of 3l65 by Molmil
Xenobiotic Reductase A - C25A Mutant
Descriptor: (R,R)-2,3-BUTANEDIOL, FLAVIN MONONUCLEOTIDE, SULFATE ION, ...
Authors:Spiegelhauer, O, Dobbek, H.
Deposit date:2009-12-23
Release date:2010-03-23
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Cysteine as a modulator residue in the active site of xenobiotic reductase A: a structural, thermodynamic and kinetic study
J.Mol.Biol., 398, 2010
5I7P
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BU of 5i7p by Molmil
Crystal structure of Fkbp12-IF(SlyD), a chimeric protein of human Fkbp12 and the insert in flap domain of Ecoli SlyD
Descriptor: Peptidyl-prolyl cis-trans isomerase FKBP1A,FKBP-type peptidyl-prolyl cis-trans isomerase SlyD,Peptidyl-prolyl cis-trans isomerase FKBP1A
Authors:Jakob, R.P, Knappe, T.A, Dobbek, H, Schmid, F.X.
Deposit date:2016-02-18
Release date:2017-03-08
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.002 Å)
Cite:Structural and Functional Analysis of Chaperone Domain Insertion in Fkbp12
To Be Published
5MX2
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BU of 5mx2 by Molmil
Photosystem II depleted of the Mn4CaO5 cluster at 2.55 A resolution
Descriptor: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
Authors:Zhang, M, Bommer, M, Chatterjee, R, Hussain, R, Kern, J, Yano, J, Dau, H, Dobbek, H, Zouni, A.
Deposit date:2017-01-20
Release date:2017-08-02
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.197 Å)
Cite:Structural insights into the light-driven auto-assembly process of the water-oxidizing Mn4CaO5-cluster in photosystem II.
Elife, 6, 2017
5L7P
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BU of 5l7p by Molmil
In silico-powered specific incorporation of photocaged Dopa at multiple protein sites
Descriptor: (2~{S})-2-azanyl-3-[3-[(2-nitrophenyl)methoxy]-4-oxidanyl-phenyl]propanoic acid, CALCIUM ION, CHLORIDE ION, ...
Authors:Hauf, M, Richter, F, Schneider, T, Martins, B.M, Baumann, T, Durkin, P, Dobbek, H, Moeglich, A, Budisa, N.
Deposit date:2016-06-03
Release date:2017-09-13
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Photoactivatable Mussel-Based Underwater Adhesive Proteins by an Expanded Genetic Code.
Chembiochem, 18, 2017
5LNI
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BU of 5lni by Molmil
XenA - oxidized - Y183F variant in complex with 7-hydroxycoumarin
Descriptor: 7-hydroxy-2H-chromen-2-one, FLAVIN MONONUCLEOTIDE, GLYCEROL, ...
Authors:Werther, T, Dobbek, H.
Deposit date:2016-08-04
Release date:2017-08-16
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.133 Å)
Cite:Redox-dependent substrate-cofactor interactions in the Michaelis-complex of a flavin-dependent oxidoreductase
Nat Commun, 8, 2017
5LNJ
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BU of 5lnj by Molmil
XenA - reduced - Y183F variant in complex with 7-hydroxycoumarin
Descriptor: 1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL, 7-hydroxy-2H-chromen-2-one, NADH:flavin oxidoreductase, ...
Authors:Werther, T, Dobbek, H.
Deposit date:2016-08-04
Release date:2017-08-16
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.16 Å)
Cite:Redox-dependent substrate-cofactor interactions in the Michaelis-complex of a flavin-dependent oxidoreductase
Nat Commun, 8, 2017
5M2G
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BU of 5m2g by Molmil
PCE reductive dehalogenase from S. multivorans in complex with 2,4,6-tribromophenol
Descriptor: 2,4,6-TRIBROMOPHENOL, BENZAMIDINE, GLYCEROL, ...
Authors:Kunze, C, Bommer, M, Hagen, W.R, Uksa, M, Dobbek, H, Schubert, T, Diekert, G.
Deposit date:2016-10-12
Release date:2017-07-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Cobamide-mediated enzymatic reductive dehalogenation via long-range electron transfer.
Nat Commun, 8, 2017
5M4J
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BU of 5m4j by Molmil
Crystal Structure of Wild-Type Human Prolidase with GlyPro ligand
Descriptor: GLYCEROL, GLYCINE, PROLINE, ...
Authors:Wilk, P, Weiss, M.S, Mueller, U, Dobbek, H.
Deposit date:2016-10-18
Release date:2017-07-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Substrate specificity and reaction mechanism of human prolidase.
FEBS J., 284, 2017
5M8X
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BU of 5m8x by Molmil
PCE reductive dehalogenase from S. multivorans in complex with 2,4,5-trichlorophenol
Descriptor: 2,4,5-trichlorophenol, BENZAMIDINE, GLYCEROL, ...
Authors:Kunze, C, Bommer, M, Hagen, W.R, Uksa, M, Dobbek, H, Schubert, T, Diekert, G.
Deposit date:2016-10-30
Release date:2017-07-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.869 Å)
Cite:Cobamide-mediated enzymatic reductive dehalogenation via long-range electron transfer.
Nat Commun, 8, 2017
5MAA
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BU of 5maa by Molmil
PCE reductive dehalogenase from S. multivorans in complex with 3-bromophenol
Descriptor: 3-bromophenol, 5-Methoxybenzimidazolyl-norcobamide, BENZAMIDINE, ...
Authors:Kunze, C, Bommer, M, Hagen, W.R, Uksa, M, Dobbek, H, Schubert, T, Diekert, G.
Deposit date:2016-11-03
Release date:2017-07-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.686 Å)
Cite:Cobamide-mediated enzymatic reductive dehalogenation via long-range electron transfer.
Nat Commun, 8, 2017
5M8U
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BU of 5m8u by Molmil
PCE reductive dehalogenase from S. multivorans in complex with 4-bromophenol
Descriptor: 4-BROMOPHENOL, BENZAMIDINE, GLYCEROL, ...
Authors:Kunze, C, Bommer, M, Hagen, W.R, Uksa, M, Dobbek, H, Schubert, T, Diekert, G.
Deposit date:2016-10-30
Release date:2017-07-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Cobamide-mediated enzymatic reductive dehalogenation via long-range electron transfer.
Nat Commun, 8, 2017
5M8Z
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BU of 5m8z by Molmil
PCE reductive dehalogenase from S. multivorans in complex with 2,3-difluorophenol
Descriptor: 2,3-bis(fluoranyl)phenol, BENZAMIDINE, GLYCEROL, ...
Authors:Kunze, C, Bommer, M, Hagen, W.R, Uksa, M, Dobbek, H, Schubert, T, Diekert, G.
Deposit date:2016-10-30
Release date:2017-07-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.659 Å)
Cite:Cobamide-mediated enzymatic reductive dehalogenation via long-range electron transfer.
Nat Commun, 8, 2017
3KNQ
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BU of 3knq by Molmil
Beta Turn Optimization of the Gene-3-Protein of Filamentous Phage Fd
Descriptor: Attachment protein G3P
Authors:Jakob, R.P, Dobbek, H.
Deposit date:2009-11-12
Release date:2009-11-24
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Elimination of a cis-proline-containing loop and turn optimization stabilizes a protein and accelerates its folding.
J.Mol.Biol., 399, 2010
5MKB
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BU of 5mkb by Molmil
Maltodextrin binding protein MalE1 from L. casei BL23 without ligand
Descriptor: MalE1
Authors:Homburg, C, Bommer, M, Wuttge, S, Hobe, C, Beck, S, Dobbek, H, Deutscher, J, Licht, A, Schneider, E.
Deposit date:2016-12-03
Release date:2017-07-05
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.698 Å)
Cite:Inducer exclusion in Firmicutes: insights into the regulation of a carbohydrate ATP binding cassette transporter from Lactobacillus casei BL23 by the signal transducing protein P-Ser46-HPr.
Mol. Microbiol., 105, 2017
4EO0
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BU of 4eo0 by Molmil
crystal structure of the pilus binding domain of the filamentous phage IKe
Descriptor: Attachment protein G3P
Authors:Jakob, R.P, Geitner, A.J, Weininger, U, Balbach, J, Dobbek, H, Schmid, F.X.
Deposit date:2012-04-13
Release date:2012-05-30
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Structural and energetic basis of infection by the filamentous bacteriophage IKe.
Mol.Microbiol., 84, 2012
4EO1
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BU of 4eo1 by Molmil
crystal structure of the TolA binding domain from the filamentous phage IKe
Descriptor: Attachment protein G3P, MAGNESIUM ION
Authors:Jakob, R.P, Geitner, A.J, Weininger, U, Balbach, J, Dobbek, H, Schmid, F.X.
Deposit date:2012-04-13
Release date:2012-05-30
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural and energetic basis of infection by the filamentous bacteriophage IKe.
Mol.Microbiol., 84, 2012
5I7Q
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BU of 5i7q by Molmil
Crystal structure of Fkbp12-IF(SlpA), a chimeric protein of human Fkbp12 and the insert in flap domain of Ecoli SlpA
Descriptor: Peptidyl-prolyl cis-trans isomerase FKBP1A,FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase,Peptidyl-prolyl cis-trans isomerase FKBP1A
Authors:Jakob, R.P, Dobbek, H, Schmid, F.X.
Deposit date:2016-02-18
Release date:2017-03-08
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural and Functional Analysis of Chaperone Domain Insertion in Fkbp12
To Be Published
5M28
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BU of 5m28 by Molmil
Maltodextrin binding protein MalE1 from L. casei BL23 bound to maltotriose
Descriptor: CHLORIDE ION, MalE1, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Homburg, C, Bommer, M, Wuttge, S, Hobe, C, Beck, S, Dobbek, H, Deutscher, J, Licht, A, Schneider, E.
Deposit date:2016-10-12
Release date:2017-07-05
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.079 Å)
Cite:Inducer exclusion in Firmicutes: insights into the regulation of a carbohydrate ATP binding cassette transporter from Lactobacillus casei BL23 by the signal transducing protein P-Ser46-HPr.
Mol. Microbiol., 105, 2017
5MBY
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BU of 5mby by Molmil
Crystal Structure of Arg184Gln mutant of Human Prolidase with Mn ions and GlyPro ligand
Descriptor: GLYCEROL, GLYCINE, HYDROXIDE ION, ...
Authors:Wilk, P, Piwowarczyk, R, Mueller, U, Dobbek, H, Weiss, M.S.
Deposit date:2016-11-09
Release date:2017-12-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural basis for prolidase deficiency disease mechanisms.
FEBS J., 285, 2018
5MBZ
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BU of 5mbz by Molmil
Crystal Structure of Ser202Phe mutant of Human Prolidase with Mn ions and GlyPro ligand
Descriptor: CHLORIDE ION, GLYCEROL, GLYCINE, ...
Authors:Wilk, P, Mueller, U, Dobbek, H, Weiss, M.S.
Deposit date:2016-11-09
Release date:2017-12-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural basis for prolidase deficiency disease mechanisms.
FEBS J., 285, 2018
5MC5
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BU of 5mc5 by Molmil
Crystal Structure of delGlu452 mutant of Human Prolidase with Mn ions and GlyPro ligand
Descriptor: GLYCEROL, GLYCINE, HYDROXIDE ION, ...
Authors:Wilk, P, Mueller, U, Dobbek, H, Weiss, M.S.
Deposit date:2016-11-09
Release date:2017-12-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for prolidase deficiency disease mechanisms.
FEBS J., 285, 2018
5MC3
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BU of 5mc3 by Molmil
Crystal Structure of Glu412Lys mutant of Human Prolidase with Mn ions and GlyPro ligand
Descriptor: GLYCEROL, GLYCINE, HYDROXIDE ION, ...
Authors:Wilk, P, Mueller, U, Dobbek, H, Weiss, M.S.
Deposit date:2016-11-09
Release date:2017-12-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Structural basis for prolidase deficiency disease mechanisms.
FEBS J., 285, 2018
5MC4
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BU of 5mc4 by Molmil
Crystal Structure of Gly448Arg mutant of Human Prolidase with Mn ions and GlyPro ligand
Descriptor: GLYCEROL, GLYCINE, HYDROXIDE ION, ...
Authors:Wilk, P, Mueller, U, Dobbek, H, Weiss, M.S.
Deposit date:2016-11-09
Release date:2017-12-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for prolidase deficiency disease mechanisms.
FEBS J., 285, 2018

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