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PDB: 241 件
1D0K
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THE ESCHERICHIA COLI LYTIC TRANSGLYCOSYLASE SLT35 IN COMPLEX WITH TWO MURODIPEPTIDES (GLCNAC-MURNAC-L-ALA-D-GLU)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-N-acetyl-beta-muramic acid, 35KD SOLUBLE LYTIC TRANSGLYCOSYLASE, ALANINE, ...
著者van Asselt, E.J, Kalk, K.H, Dijkstra, B.W.
登録日1999-09-12
公開日2000-03-06
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献Crystallographic studies of the interactions of Escherichia coli lytic transglycosylase Slt35 with peptidoglycan.
Biochemistry, 39, 2000
1CZF
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ENDO-POLYGALACTURONASE II FROM ASPERGILLUS NIGER
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, POLYGALACTURONASE II, ZINC ION
著者van Santen, Y, Kalk, K.H, Dijkstra, B.W.
登録日1999-09-02
公開日1999-10-28
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献1.68-A crystal structure of endopolygalacturonase II from Aspergillus niger and identification of active site residues by site-directed mutagenesis.
J.Biol.Chem., 274, 1999
1D0M
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THE ESCHERICHIA COLI LYTIC TRANSGLYCOSYLASE SLT35 IN COMPLEX WITH BULGECIN A AND (GLCNAC)2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose, 35KD SOLUBLE LYTIC TRANSGLYCOSYLASE, 4-O-(4-O-SULFONYL-N-ACETYLGLUCOSAMININYL)-5-METHYLHYDROXY-L-PROLINE-TAURINE, ...
著者van Asselt, E.J, Kalk, K.H, Dijkstra, B.W.
登録日1999-09-12
公開日2000-03-06
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.47 Å)
主引用文献Crystallographic studies of the interactions of Escherichia coli lytic transglycosylase Slt35 with peptidoglycan.
Biochemistry, 39, 2000
1D0L
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THE ESCHERICHIA COLI LYTIC TRANSGLYCOSYLASE SLT35 IN COMPLEX WITH BULGECIN A
分子名称: 35KD SOLUBLE LYTIC TRANSGLYCOSYLASE, 4-O-(4-O-SULFONYL-N-ACETYLGLUCOSAMININYL)-5-METHYLHYDROXY-L-PROLINE-TAURINE, CALCIUM ION
著者van Asselt, E.J, Kalk, K.H, Dijkstra, B.W.
登録日1999-09-12
公開日2000-03-06
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Crystallographic studies of the interactions of Escherichia coli lytic transglycosylase Slt35 with peptidoglycan.
Biochemistry, 39, 2000
2PI8
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Crystal structure of E. coli MltA with bound chitohexaose
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Membrane-bound lytic murein transglycosylase A, PHOSPHATE ION
著者van Straaten, K.E, Barends, T.R.M, Dijkstra, B.W, Thunnissen, A.M.W.H.
登録日2007-04-13
公開日2007-05-08
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structure of Escherichia coli Lytic transglycosylase MltA with bound chitohexaose: implications for peptidoglycan binding and cleavage
J.Biol.Chem., 282, 2007
2HTN
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E. coli bacterioferritin in its as-isolated form
分子名称: Bacterioferritin, FE (III) ION, PROTOPORPHYRIN IX CONTAINING FE
著者van Eerde, A, Wolterink-Van Loo, S, Van Der Oost, J, Dijkstra, B.W.
登録日2006-07-26
公開日2006-11-21
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Fortuitous structure determination of 'as-isolated' Escherichia coli bacterioferritin in a novel crystal form.
Acta Crystallogr.,Sect.F, 62, 2006
2PIC
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E. coli lytic transglycosylase MltA-D308A in apo-2 form
分子名称: Membrane-bound lytic murein transglycosylase A
著者van Straaten, K.E, Dijkstra, B.W, Thunnissen, A.M.W.H.
登録日2007-04-13
公開日2007-05-08
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structure of Escherichia coli Lytic transglycosylase MltA with bound chitohexaose: implications for peptidoglycan binding and cleavage
J.Biol.Chem., 282, 2007
2HIH
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Crystal structure of Staphylococcus hyicus lipase
分子名称: CALCIUM ION, Lipase 46 kDa form, ZINC ION
著者Tiesinga, J.J.W, van Pouderoyen, G, Nardini, M, Dijkstra, B.W.
登録日2006-06-29
公開日2007-05-22
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.86 Å)
主引用文献Structural basis of phospholipase activity of Staphylococcus hyicus lipase.
J.Mol.Biol., 371, 2007
2PJJ
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E. coli lytic transglycosylase MltA-D308A in apo-1 form
分子名称: Membrane-bound lytic murein transglycosylase A
著者van Straaten, K.E, Dijkstra, B.W, Thunnissen, A.M.W.H.
登録日2007-04-16
公開日2007-05-08
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.46 Å)
主引用文献Structure of Escherichia coli Lytic transglycosylase MltA with bound chitohexaose: implications for peptidoglycan binding and cleavage
J.Biol.Chem., 282, 2007
1OXS
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Crystal structure of GlcV, the ABC-ATPase of the glucose ABC transporter from Sulfolobus solfataricus
分子名称: ABC transporter, ATP binding protein, IODIDE ION
著者Verdon, G, Albers, S.V, Dijkstra, B.W, Driessen, A.J, Thunnissen, A.M.
登録日2003-04-03
公開日2003-06-17
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystal structures of the ATPase subunit of the glucose ABC transporter from Sulfolobus solfataricus: nucleotide-free and nucleotide-bound conformations
J.Mol.Biol., 330, 2003
1OXT
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Crystal structure of GlcV, the ABC-ATPase of the glucose ABC transporter from Sulfolobus solfataricus
分子名称: ABC transporter, ATP binding protein
著者Verdon, G, Albers, S.V, Dijkstra, B.W, Driessen, A.J, Thunnissen, A.M.
登録日2003-04-03
公開日2003-06-17
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structures of the ATPase subunit of the glucose ABC transporter from Sulfolobus solfataricus: nucleotide-free and nucleotide-bound conformations
J.Mol.Biol., 330, 2003
1QD6
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OUTER MEMBRANE PHOSPHOLIPASE A FROM ESCHERICHIA COLI
分子名称: 1-HEXADECANOSULFONIC ACID, CALCIUM ION, OUTER MEMBRANE PHOSPHOLIPASE (OMPLA), ...
著者Snijder, H.J, Ubarretxena-Belandia, I, Blaauw, M, Kalk, K.H, Verheij, H.M, Egmond, M.R, Dekker, N, Dijkstra, B.W.
登録日1999-07-09
公開日1999-10-25
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural evidence for dimerization-regulated activation of an integral membrane phospholipase.
Nature, 401, 1999
1QD5
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OUTER MEMBRANE PHOSPHOLIPASE A FROM ESCHERICHIA COLI
分子名称: OUTER MEMBRANE PHOSPHOLIPASE A, octyl beta-D-glucopyranoside
著者Snijder, H.J, Ubarretxena-Belandia, I, Blaauw, M, Kalk, K.H, Verheij, H.M, Egmond, M.R, Dekker, N, Dijkstra, B.W.
登録日1999-07-09
公開日1999-10-25
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.17 Å)
主引用文献Structural evidence for dimerization-regulated activation of an integral membrane phospholipase.
Nature, 401, 1999
1OXV
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Crystal structure of GlcV, the ABC-ATPase of the glucose ABC transporter from Sulfolobus solfataricus
分子名称: ABC transporter, ATP binding protein, IODIDE ION, ...
著者Verdon, G, Albers, S.V, Dijkstra, B.W, Driessen, A.J, Thunnissen, A.M.
登録日2003-04-03
公開日2003-06-17
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal structures of the ATPase subunit of the glucose ABC transporter from Sulfolobus solfataricus: nucleotide-free and nucleotide-bound conformations
J.Mol.Biol., 330, 2003
1OXU
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Crystal structure of GlcV, the ABC-ATPase of the glucose ABC transporter from Sulfolobus solfataricus
分子名称: ABC transporter, ATP binding protein, ADENOSINE-5'-DIPHOSPHATE, ...
著者Verdon, G, Albers, S.V, Dijkstra, B.W, Driessen, A.J, Thunnissen, A.M.
登録日2003-04-03
公開日2003-06-17
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structures of the ATPase subunit of the glucose ABC transporter from Sulfolobus solfataricus: nucleotide-free and nucleotide-bound conformations
J.Mol.Biol., 330, 2003
1EX9
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CRYSTAL STRUCTURE OF THE PSEUDOMONAS AERUGINOSA LIPASE COMPLEXED WITH RC-(RP,SP)-1,2-DIOCTYLCARBAMOYL-GLYCERO-3-O-OCTYLPHOSPHONATE
分子名称: CALCIUM ION, LACTONIZING LIPASE, OCTYL-PHOSPHINIC ACID 1,2-BIS-OCTYLCARBAMOYLOXY-ETHYL ESTER
著者Nardini, M, Lang, D.A, Liebeton, K, Jaeger, K.-E, Dijkstra, B.W.
登録日2000-05-02
公開日2000-10-18
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.54 Å)
主引用文献Crystal structure of pseudomonas aeruginosa lipase in the open conformation. The prototype for family I.1 of bacterial lipases.
J.Biol.Chem., 275, 2000
2DHE
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CRYSTALLOGRAPHIC ANALYSIS OF THE CATALYTIC MECHANISM OF HALOALKANE DEHALOGENASE
分子名称: CHLORIDE ION, HALOALKANE DEHALOGENASE
著者Verschueren, K.H.G, Dijkstra, B.W.
登録日1993-06-24
公開日1994-08-31
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.13 Å)
主引用文献Crystallographic analysis of the catalytic mechanism of haloalkane dehalogenase.
Nature, 363, 1993
2DHC
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CRYSTALLOGRAPHIC ANALYSIS OF THE CATALYTIC MECHANISM OF HALOALKANE DEHALOGENASE
分子名称: 1,2-DICHLOROETHANE, HALOALKANE DEHALOGENASE
著者Verschueren, K.H.G, Dijkstra, B.W.
登録日1993-09-08
公開日1994-07-31
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystallographic analysis of the catalytic mechanism of haloalkane dehalogenase.
Nature, 363, 1993
2DHD
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CRYSTALLOGRAPHIC ANALYSIS OF THE CATALYTIC MECHANISM OF HALOALKANE DEHALOGENASE
分子名称: CHLORIDE ION, HALOALKANE DEHALOGENASE
著者Verschueren, K.H.G, Dijkstra, B.W.
登録日1993-09-08
公開日1994-07-31
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.13 Å)
主引用文献Crystallographic analysis of the catalytic mechanism of haloalkane dehalogenase.
Nature, 363, 1993
1FP8
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STRUCTURE OF THE AMYLOMALTASE FROM THERMUS THERMOPHILUS HB8 IN SPACE GROUP P21212
分子名称: 4-ALPHA-GLUCANOTRANSFERASE, CHLORIDE ION, MERCURY (II) ION
著者Uitdehaag, J.C.M, Euverink, G.J, van der Veen, B.A, van der Maarel, M, Dijkstra, B.W.
登録日2000-08-31
公開日2003-09-02
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure and mechanism of the amylomaltase from Thermus thermophilus HB8
To be Published
1H1M
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CRYSTAL STRUCTURE OF QUERCETIN 2,3-DIOXYGENASE ANAEROBICALLY COMPLEXED WITH THE SUBSTRATE KAEMPFEROL
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Steiner, R.A, Dijkstra, B.W.
登録日2002-07-19
公開日2002-11-28
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Anaerobic Enzyme.Substrate Structures Provide Insight Into the Reaction Mechanism of the Copper- Dependent Quercetin 2,3-Dioxygenase.
Proc.Natl.Acad.Sci.USA, 99, 2002
1GQH
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Quercetin 2,3-dioxygenase in complex with the inhibitor kojic acid
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 5-HYDROXY-2-(HYDROXYMETHYL)-4H-PYRAN-4-ONE, ...
著者Steiner, R.A, Dijkstra, B.W.
登録日2001-11-23
公開日2002-06-21
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Functional Analysis of the Copper-Dependent Quercetin 2,3-Dioxygenase.1.Ligand-Induced Coordination Changes Probed by X-Ray Crystallography: Inhibition, Ordering Effect and Mechanistic Insights
Biochemistry, 41, 2002
1GQG
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Quercetin 2,3-dioxygenase in complex with the inhibitor diethyldithiocarbamate
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, COPPER (II) ION, ...
著者Steiner, R.A, Dijkstra, B.W.
登録日2001-11-23
公開日2002-06-21
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Functional Analysis of the Copper-Dependent Quercetin 2,3-Dioxygenase.1.Ligand-Induced Coordination Changes Probed by X-Ray Crystallography: Inhibition, Ordering Effect and Mechanistic Insights
Biochemistry, 41, 2002
2EDC
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CRYSTALLOGRAPHIC AND FLUORESCENCE STUDIES OF THE INTERACTION OF HALOALKANE DEHALOGENASE WITH HALIDE IONS: STUDIES WITH HALIDE COMPOUNDS REVEAL A HALIDE BINDING SITE IN THE ACTIVE SITE
分子名称: HALOALKANE DEHALOGENASE, IODIDE ION
著者Verschueren, K.H.G, Dijkstra, B.W.
登録日1993-08-31
公開日1994-01-31
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystallographic and fluorescence studies of the interaction of haloalkane dehalogenase with halide ions. Studies with halide compounds reveal a halide binding site in the active site.
Biochemistry, 32, 1993
2YKU
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Structural Determinants of the Beta-Selectivity of a Bacterial Aminotransferase
分子名称: 1,2-ETHANEDIOL, BETA-TRANSAMINASE, GLYCEROL, ...
著者Wybenga, G.G, Crismaru, C.G, Janssen, D.B, Dijkstra, B.W.
登録日2011-05-30
公開日2012-05-30
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural Determinants of the Beta-Selectivity of a Bacterial Aminotransferase.
J.Biol.Chem., 287, 2012

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