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PDB: 38 件
1SBR
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The structure and function of B. subtilis YkoF gene product: the complex with thiamin
分子名称: 3-(4-AMINO-2-METHYL-PYRIMIDIN-5-YLMETHYL)-5-(2-HYDROXY-ETHYL)-4-METHYL-THIAZOL-3-IUM, CALCIUM ION, ykoF
著者Devedjiev, Y, Surendranath, Y, Derewenda, U, Derewenda, Z.S.
登録日2004-02-11
公開日2004-10-05
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The Structure and Ligand Binding Properties of the B.subtilis YkoF Gene Product, a Member of a Novel Family of Thiamin/HMP-binding Proteins
J.Mol.Biol., 343, 2004
1S99
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The structure and function of B. subtilis YkoF gene product: ligand free protein
分子名称: ACETATE ION, CALCIUM ION, ykoF
著者Devedjiev, Y, Surendranath, Y, Derewenda, U, Derewenda, Z.S.
登録日2004-02-04
公開日2004-10-05
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献The Structure and Ligand Binding Properties of the B.subtilis YkoF Gene Product, a Member of a Novel Family of Thiamin/HMP-binding Proteins
J.Mol.Biol., 343, 2004
1EE1
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CRYSTAL STRUCTURE OF NH3-DEPENDENT NAD+ SYNTHETASE FROM BACILLUS SUBTILIS COMPLEXED WITH ONE MOLECULE ATP, TWO MOLECULES DEAMIDO-NAD+ AND ONE MG2+ ION
分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, NH(3)-DEPENDENT NAD(+) SYNTHETASE, ...
著者Devedjiev, Y, Symersky, J, Singh, R, Jedrzejas, M, Brouillette, C, Brouillette, W, Muccio, D, Chattopadhyay, D, Delucas, L.
登録日2000-01-28
公開日2001-06-06
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.06 Å)
主引用文献Stabilization of active-site loops in NH3-dependent NAD+ synthetase from Bacillus subtilis.
Acta Crystallogr.,Sect.D, 57, 2001
1VPI
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PHOSPHOLIPASE A2 INHIBITOR FROM VIPOXIN
分子名称: PHOSPHOLIPASE A2 INHIBITOR
著者Devedjiev, Y.D, Popov, A.N.
登録日1996-12-17
公開日1997-12-24
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献X-ray structure at 1.76 A resolution of a polypeptide phospholipase A2 inhibitor.
J.Mol.Biol., 266, 1997
1FYD
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CRYSTAL STRUCTURE OF NH3-DEPENDENT NAD+ SYNTHETASE FROM BACILLUS SUBTILIS COMPLEXED WITH ONE MOLECULE AMP, ONE PYROPHOSPHATE ION AND ONE MG2+ ION
分子名称: ADENOSINE MONOPHOSPHATE, MAGNESIUM ION, NH(3)-DEPENDENT NAD(+) SYNTHETASE, ...
著者Devedjiev, Y, Symersky, J, Singh, R, Brouillette, W, Muccio, D, Jedrzejas, M, Brouillette, C, DeLucas, L.
登録日2000-09-28
公開日2001-06-06
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Stabilization of active-site loops in NH3-dependent NAD+ synthetase from Bacillus subtilis.
Acta Crystallogr.,Sect.D, 57, 2001
1IH8
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NH3-dependent NAD+ Synthetase from Bacillus subtilis Complexed with AMP-CPP and Mg2+ ions.
分子名称: DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, MAGNESIUM ION, NH(3)-DEPENDENT NAD(+) synthetase
著者Devedjiev, Y, Symersky, J, Singh, R, Jedrzejas, M, Brouillette, C, Brouillette, W, Muccio, D, Chattopadhyay, D, DeLucas, L.
登録日2001-04-18
公開日2001-06-06
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Stabilization of active-site loops in NH3-dependent NAD+ synthetase from Bacillus subtilis.
Acta Crystallogr.,Sect.D, 57, 2001
1IFX
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CRYSTAL STRUCTURE OF NH3-DEPENDENT NAD+ SYNTHETASE FROM BACILLUS SUBTILIS COMPLEXED WITH TWO MOLECULES DEAMIDO-NAD
分子名称: NH(3)-DEPENDENT NAD(+) SYNTHETASE, NICOTINIC ACID ADENINE DINUCLEOTIDE
著者Devedjiev, Y, Symersky, J, Singh, R, Brouillette, W, Muccio, D, Jedrzejas, M, Brouillette, C, DeLucas, L.
登録日2001-04-13
公開日2001-06-06
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Stabilization of active-site loops in NH3-dependent NAD+ synthetase from Bacillus subtilis.
Acta Crystallogr.,Sect.D, 57, 2001
1FJ2
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Crystal structure of the human acyl protein thioesterase 1 at 1.5 A resolution
分子名称: BROMIDE ION, PROTEIN (ACYL PROTEIN THIOESTERASE 1)
著者Devedjiev, Y, Dauter, Z, Kuznetsov, S, Jones, T, Derewenda, Z.
登録日2000-08-07
公開日2000-11-29
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal structure of the human acyl protein thioesterase I from a single X-ray data set to 1.5 A.
Structure Fold.Des., 8, 2000
1TBU
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Crystal structure of N-terminal domain of yeast peroxisomal thioesterase-1
分子名称: FORMIC ACID, Peroxisomal acyl-coenzyme A thioester hydrolase 1
著者Devedjiev, Y.D, Li, J, Derewenda, U, Derewenda, Z.S.
登録日2004-05-20
公開日2005-10-04
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of N-terminal domain of yeast peroxisomal thioesterase-1
To be Published
2BJO
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Crystal Structure of the Organic Hydroperoxide Resistance Protein OhrB of Bacillus subtilis
分子名称: ORGANIC HYDROPEROXIDE RESISTANCE PROTEIN OHRB
著者Cooper, D.R, Surendranath, Y, Bielnicki, J, Devedjiev, Y, Joachimiak, A, Derewenda, Z.S.
登録日2005-02-04
公開日2006-03-09
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure of the Bacillus Subtilis Ohrb Hydroperoxide-Resistance Protein in a Fully Oxidized State.
Acta Crystallogr.,Sect.D, 63, 2007
2PNR
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Crystal Structure of the asymmetric Pdk3-l2 Complex
分子名称: DIHYDROLIPOIC ACID, Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 3
著者Vassylyev, D.G, Steussy, C.N, Devedjiev, Y.
登録日2007-04-25
公開日2007-08-21
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal Structure of an Asymmetric complex of Pyruvate Dehydrogenase Kinase 3 with Lipoyl domain 2 and its Biological Implications
J.Mol.Biol., 370, 2007
5DDI
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Crystal structure of glyceraldehyde-3-phosphate dehydrogenase from pig muscle - holo enzyme - at 2.40 Angstrom resolution
分子名称: Glyceraldehyde-3-phosphate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SULFATE ION
著者Dimova, M, Devedjiev, Y.D.
登録日2015-08-24
公開日2016-08-24
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Novel enhancer binding site found in bacteria and eukaryota but not in archea.
To Be Published
5TSO
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CRYSTAL STRUCTURE OF GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE FROM PIG MUSCLE COMPLEXED WITH ORTHOPHENANTHROLINE AT 1.90 ANGSTROM RESOLUTION
分子名称: 1,10-PHENANTHROLINE, GLYCEROL, Glyceraldehyde-3-phosphate dehydrogenase, ...
著者Dimova, M, Devedjiev, Y.D.
登録日2016-10-30
公開日2017-05-03
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Novel Enhancer Binding Site Found In Bacteria And Eukaryota But Not In Archea.
To Be Published
1YBO
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Crystal structure of the PDZ tandem of human syntenin with syndecan peptide
分子名称: Syndecan-4, Syntenin 1
著者Grembecka, J, Cooper, D.R, Cierpicki, T, Kang, B.S, Devedjiev, Y, Derewenda, Z.
登録日2004-12-21
公開日2006-01-10
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The binding of the PDZ tandem of syntenin to target proteins
Biochemistry, 45, 2006
1Y7M
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Crystal Structure of the B. subtilis YkuD protein at 2 A resolution
分子名称: CADMIUM ION, SULFATE ION, hypothetical protein BSU14040
著者Bielnicki, J.A, Devedjiev, Y, Derewenda, U, Dauter, Z, Joachimiak, A, Derewenda, Z.S, Midwest Center for Structural Genomics (MCSG)
登録日2004-12-09
公開日2005-03-01
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献B. subtilis ykuD protein at 2.0 A resolution: insights into the structure and function of a novel, ubiquitous family of bacterial enzymes.
Proteins, 62, 2006
1KQP
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NH3-DEPENDENT NAD+ SYNTHETASE FROM BACILLUS SUBTILIS AT 1 A RESOLUTION
分子名称: 1,2-ETHANEDIOL, MAGNESIUM ION, NH(3)-dependent NAD(+) synthetase, ...
著者Symersky, J, Devedjiev, Y, Moore, K, Brouillette, C, DeLucas, L.
登録日2002-01-07
公開日2002-06-28
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.03 Å)
主引用文献NH3-dependent NAD+ synthetase from Bacillus subtilis at 1 A resolution.
Acta Crystallogr.,Sect.D, 58, 2002
1H4R
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Crystal Structure of the FERM domain of Merlin, the Neurofibromatosis 2 Tumor Suppressor Protein.
分子名称: MERLIN, SULFATE ION
著者Cooper, D.R, Kang, B.S, Sheffield, P, Devedjiev, Y, Derewenda, Z.S.
登録日2001-05-14
公開日2002-01-16
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The Structure of the Ferm Domain of Merlin, the Neurofibromatosis Type 2 Gene Product.
Acta Crystallogr.,Sect.D, 58, 2002
1OBZ
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Crystal structure of the complex of the PDZ tandem of syntenin with an interleukin 5 receptor alpha peptide.
分子名称: ACETATE ION, INTERLEUKIN 5 RECEPTOR ALPHA, SYNTENIN 1
著者Kang, B.S, Cooper, D.R, Devedjiev, Y, Derewenda, U, Derewenda, Z.S.
登録日2003-01-31
公開日2003-07-11
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Molecular Roots of Degenerate Specificity in Syntenin'S Pdz2 Domain: Reassessment of the Pdz Recognition Paradigm
Structure, 11, 2003
1NTE
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CRYSTAL STRUCTURE ANALYSIS OF THE SECOND PDZ DOMAIN OF SYNTENIN
分子名称: OXYGEN ATOM, Syntenin 1
著者Kang, B.S, Cooper, D.R, Devedjiev, Y, Derewenda, U, Derewenda, Z.S.
登録日2003-01-29
公開日2003-07-15
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.24 Å)
主引用文献Molecular roots of degenerate specificity in syntenin's PDZ2 domain: reassessment of the PDZ recognition paradigm.
Structure, 11, 2003
1QVY
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Crystal structure of RhoGDI K(199,200)R double mutant
分子名称: Rho GDP-dissociation inhibitor 1, SULFATE ION
著者Czepas, J, Devedjiev, Y, Krowarsh, D, Derewenda, U, Derewenda, Z.S.
登録日2003-08-29
公開日2004-02-10
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献The impact of Lys-->Arg surface mutations on the crystallization of the globular domain of RhoGDI.
Acta Crystallogr.,Sect.D, 60, 2004
1OBY
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Crystal structure of the complex of PDZ2 of syntenin with a syndecan-4 peptide.
分子名称: SULFATE ION, SYNDECAN-4, SYNTENIN 1
著者Kang, B.S, Cooper, D.R, Devedjiev, Y, Derewenda, U, Derewenda, Z.S.
登録日2003-01-31
公開日2003-07-11
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Molecular Roots of Degenerate Specificity in Syntenin'S Pdz2 Domain: Reassessment of the Pdz Recognition Paradigm
Structure, 11, 2003
1R6F
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The structure of Yersinia pestis V-antigen, an essential virulence factor and mediator of immunity against plague
分子名称: Virulence-associated V antigen
著者Derewenda, U, Mateja, A, Devedjiev, Y, Routzahn, K.M, Evdokimov, A.G, Derewenda, Z.S, Waugh, D.S.
登録日2003-10-15
公開日2004-03-09
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.17 Å)
主引用文献The structure of Yersinia pestis V-antigen, an essential virulence factor and mediator of immunity against plague
Structure, 12, 2004
1R6J
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Ultrahigh resolution Crystal Structure of syntenin PDZ2
分子名称: CHLORIDE ION, Syntenin 1
著者Kang, B.S, Devedjiev, Y, Derewenda, U, Derewenda, Z.S.
登録日2003-10-15
公開日2004-05-04
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (0.73 Å)
主引用文献The PDZ2 domain of syntenin at ultra-high resolution: bridging the gap between small molecule and macromolecular crystal chemistry
J.Mol.Biol., 338, 2004
1KMT
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Crystal structure of RhoGDI Glu(154,155)Ala mutant
分子名称: Rho GDP-dissociation inhibitor 1
著者Mateja, A, Devedjiev, Y, Krowarsh, D, Longenecker, K, Dauter, Z, Otlewski, J, Derewenda, Z.S.
登録日2001-12-17
公開日2002-12-11
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献The impact of Glu-->Ala and Glu-->Asp mutations on the crystallization properties of RhoGDI: the structure of RhoGDI at 1.3 A resolution.
Acta Crystallogr.,Sect.D, 58, 2002
1N99
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CRYSTAL STRUCTURE OF THE PDZ TANDEM OF HUMAN SYNTENIN
分子名称: Syntenin 1
著者Kang, B.S, Cooper, D.R, Jelen, F, Devedjiev, Y, Derewenda, U, Dauter, Z, Otlewski, J, Derewenda, Z.S.
登録日2002-11-22
公開日2003-04-15
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献PDZ Tandem of Human Syntenin: Crystal Structure and Functional Properties
Structure, 11, 2003

 

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