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PDB: 257 results

5VER
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BU of 5ver by Molmil
MOUSE KYNURENINE AMINOTRANSFERASE III, RE-REFINEMENT OF THE PDB STRUCTURE 3E2Z
Descriptor: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, ...
Authors:Wlodawer, A, Dauter, Z, Minor, W, Stanfield, R, Porebski, P, Jaskolski, M, Pozharski, E, Weichenberger, C.X, Rupp, B.
Deposit date:2017-04-05
Release date:2017-11-29
Last modified:2022-04-13
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:Detect, correct, retract: How to manage incorrect structural models.
FEBS J., 285, 2018
5VEP
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BU of 5vep by Molmil
MOUSE KYNURENINE AMINOTRANSFERASE III, RE-REFINEMENT OF THE PDB STRUCTURE 3E2F
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Wlodawer, A, Dauter, Z, Minor, W, Stanfield, R, Porebski, P, Jaskolski, M, Pozharski, E, Weichenberger, C.X, Rupp, B.
Deposit date:2017-04-05
Release date:2017-11-29
Last modified:2022-04-13
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Detect, correct, retract: How to manage incorrect structural models.
FEBS J., 285, 2018
5VF5
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BU of 5vf5 by Molmil
Crystal structure of the vicilin from Solanum melongena, re-refinement
Descriptor: ACETATE ION, COPPER (II) ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Porebski, P.J, Wlodawer, A, Dauter, Z, Minor, W, Stanfield, R, Jaskolski, M, Pozharski, E, Weichenberger, C.X, Rupp, B.
Deposit date:2017-04-06
Release date:2017-12-06
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Detect, correct, retract: How to manage incorrect structural models.
FEBS J., 285, 2018
5VLB
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BU of 5vlb by Molmil
Crystal Structure of Medicago truncatula L-Histidinol Dehydrogenase in Complex with Imidazole
Descriptor: DI(HYDROXYETHYL)ETHER, Histidinol dehydrogenase, chloroplastic, ...
Authors:Ruszkowski, M, Dauter, Z.
Deposit date:2017-04-25
Release date:2017-09-20
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structures of Medicago truncatula L-Histidinol Dehydrogenase Show Rearrangements Required for NAD(+) Binding and the Cofactor Positioned to Accept a Hydride.
Sci Rep, 7, 2017
3SIX
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BU of 3six by Molmil
Crystal structure of NodZ alpha-1,6-fucosyltransferase soaked with GDP-fucose
Descriptor: CHLORIDE ION, GUANOSINE-5'-DIPHOSPHATE, Nodulation fucosyltransferase NodZ, ...
Authors:Brzezinski, K, Dauter, Z, Jaskolski, M.
Deposit date:2011-06-20
Release date:2012-02-08
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structures of NodZ alpha-1,6-fucosyltransferase in complex with GDP and GDP-fucose
Acta Crystallogr.,Sect.D, 68, 2012
3SIW
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BU of 3siw by Molmil
Crystal structure of NodZ alpha-1,6-fucosyltransferase co-crystallized with GDP
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Nodulation fucosyltransferase NodZ, PHOSPHATE ION
Authors:Brzezinski, K, Dauter, Z, Jaskolski, M.
Deposit date:2011-06-20
Release date:2012-02-08
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Structures of NodZ alpha-1,6-fucosyltransferase in complex with GDP and GDP-fucose
Acta Crystallogr.,Sect.D, 68, 2012
3SS9
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BU of 3ss9 by Molmil
Crystal structure of holo D-serine dehydratase from Escherichia coli at 1.97 A resolution
Descriptor: D-serine dehydratase, POTASSIUM ION, PYRIDOXAL-5'-PHOSPHATE
Authors:Urusova, D.V, Isupov, M.N, Antonyuk, S.V, Kachalova, G.S, Vagin, A.A, Lebedev, A.A, Bourenkov, G.P, Dauter, Z, Bartunik, H.D, Melik-Adamyan, W.R, Mueller, T.D, Schnackerz, K.D.
Deposit date:2011-07-08
Release date:2012-01-18
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Crystal structure of D-serine dehydratase from Escherichia coli.
Biochim.Biophys.Acta, 1824, 2011
1GA6
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BU of 1ga6 by Molmil
CRYSTAL STRUCTURE ANALYSIS OF PSCP (PSEUDOMONAS SERINE-CARBOXYL PROTEINASE) COMPLEXED WITH A FRAGMENT OF TYROSTATIN (THIS ENZYME RENAMED "SEDOLISIN" IN 2003)
Descriptor: ACETATE ION, CALCIUM ION, FRAGMENT OF TYROSTATIN, ...
Authors:Wlodawer, A, Li, M, Dauter, Z, Gustchina, A, Uchida, K.
Deposit date:2000-11-29
Release date:2000-12-13
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1 Å)
Cite:Carboxyl proteinase from Pseudomonas defines a novel family of subtilisin-like enzymes.
Nat.Struct.Biol., 8, 2001
1GA4
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BU of 1ga4 by Molmil
CRYSTAL STRUCTURE ANALYSIS OF PSCP (PSEUDOMONAS SERINE-CARBOXYL PROTEINASE) COMPLEXED WITH INHIBITOR PSEUDOIODOTYROSTATIN (THIS ENZYME RENAMED "SEDOLISIN" IN 2003)
Descriptor: CALCIUM ION, GLYCEROL, PSEUDOIODOTYROSTATIN, ...
Authors:Wlodawer, A, Li, M, Dauter, Z, Gustchina, A, Uchida, K.
Deposit date:2000-11-29
Release date:2000-12-13
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Carboxyl proteinase from Pseudomonas defines a novel family of subtilisin-like enzymes.
Nat.Struct.Biol., 8, 2001
6B91
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BU of 6b91 by Molmil
Crystal structure of the N-terminal domain of human METTL16
Descriptor: 1,2-ETHANEDIOL, SODIUM ION, U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase
Authors:Ruszkowska, A, Ruszkowski, M, Dauter, Z, Brown, J.A.
Deposit date:2017-10-09
Release date:2018-04-04
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Structural insights into the RNA methyltransferase domain of METTL16.
Sci Rep, 8, 2018
6B92
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BU of 6b92 by Molmil
Crystal Structure of the N-terminal domain of human METTL16 in complex with SAH
Descriptor: 1,2-ETHANEDIOL, S-ADENOSYL-L-HOMOCYSTEINE, U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase
Authors:Ruszkowska, A, Ruszkowski, M, Dauter, Z, Brown, J.A.
Deposit date:2017-10-09
Release date:2018-04-04
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural insights into the RNA methyltransferase domain of METTL16.
Sci Rep, 8, 2018
6BQ7
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BU of 6bq7 by Molmil
Crystal structure of Medicago truncatula Thermospermine Synthase (MtTSPS) in complex with spermidine
Descriptor: SPERMIDINE, Thermospermine synthase
Authors:Sekula, B, Dauter, Z.
Deposit date:2017-11-27
Release date:2018-02-28
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of thermospermine synthase fromMedicago truncatulaand substrate discriminatory features of plant aminopropyltransferases.
Biochem. J., 475, 2018
6BQ2
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BU of 6bq2 by Molmil
Crystal structure of Medicago truncatula Thermospermine Synthase (MtTSPS)
Descriptor: 1,2-ETHANEDIOL, MAGNESIUM ION, Thermospermine synthase ACAULIS protein
Authors:Sekula, B, Dauter, Z.
Deposit date:2017-11-27
Release date:2018-02-28
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Crystal structure of thermospermine synthase fromMedicago truncatulaand substrate discriminatory features of plant aminopropyltransferases.
Biochem. J., 475, 2018
6BQ5
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BU of 6bq5 by Molmil
Crystal structure of Medicago truncatula Thermospermine Synthase (MtTSPS) in complex with 5'-methylthioadenosine
Descriptor: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 5'-DEOXY-5'-METHYLTHIOADENOSINE, GLYCEROL, ...
Authors:Sekula, B, Dauter, Z.
Deposit date:2017-11-27
Release date:2018-02-28
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of thermospermine synthase fromMedicago truncatulaand substrate discriminatory features of plant aminopropyltransferases.
Biochem. J., 475, 2018
6BQ4
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BU of 6bq4 by Molmil
Crystal structure of Medicago truncatula Thermospermine Synthase (MtTSPS) in complex with adenosine
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ADENOSINE, ...
Authors:Sekula, B, Dauter, Z.
Deposit date:2017-11-27
Release date:2018-02-28
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Crystal structure of thermospermine synthase fromMedicago truncatulaand substrate discriminatory features of plant aminopropyltransferases.
Biochem. J., 475, 2018
6BQ6
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BU of 6bq6 by Molmil
Crystal structure of Medicago truncatula Thermospermine Synthase (MtTSPS) in complex with thermospermine
Descriptor: CHLORIDE ION, N-(3-AMINO-PROPYL)-N-(5-AMINOPROPYL)-1,4-DIAMINOBUTANE, Thermospermine synthase
Authors:Sekula, B, Dauter, Z.
Deposit date:2017-11-27
Release date:2018-02-28
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of thermospermine synthase fromMedicago truncatulaand substrate discriminatory features of plant aminopropyltransferases.
Biochem. J., 475, 2018
6BQ3
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BU of 6bq3 by Molmil
Crystal structure of Medicago truncatula Thermospermine Synthase (MtTSPS) in complex with 5'-S-(3-aminopropyl)-5'-thioadenosine
Descriptor: 5'-S-(3-aminopropyl)-5'-thioadenosine, Thermospermine synthase
Authors:Sekula, B, Dauter, Z.
Deposit date:2017-11-27
Release date:2018-02-28
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Crystal structure of thermospermine synthase fromMedicago truncatulaand substrate discriminatory features of plant aminopropyltransferases.
Biochem. J., 475, 2018
6CD1
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BU of 6cd1 by Molmil
Crystal structure of Medicago truncatula serine hydroxymethyltransferase 3 (MtSHMT3), complexes with reaction intermediates
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, GLYCINE, ...
Authors:Ruszkowski, M, Sekula, B, Ruszkowska, A, Dauter, Z.
Deposit date:2018-02-07
Release date:2018-05-23
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Chloroplastic Serine Hydroxymethyltransferase FromMedicago truncatula: A Structural Characterization.
Front Plant Sci, 9, 2018
6CCZ
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BU of 6ccz by Molmil
Crystal structure of Medicago truncatula serine hydroxymethyltransferase 3 (MtSHMT3) soaked with selenourea
Descriptor: ACETATE ION, FORMIC ACID, Serine hydroxymethyltransferase, ...
Authors:Ruszkowski, M, Sekula, B, Ruszkowska, A, Dauter, Z.
Deposit date:2018-02-07
Release date:2018-05-23
Last modified:2018-06-20
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Chloroplastic Serine Hydroxymethyltransferase FromMedicago truncatula: A Structural Characterization.
Front Plant Sci, 9, 2018
6CZY
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BU of 6czy by Molmil
Crystal structure of Arabidopsis thaliana phosphoserine aminotransferase isoform 1 (AtPSAT1) in complex with Pyridoxamine-5'-phosphate (PMP)
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, DI(HYDROXYETHYL)ETHER, ...
Authors:Sekula, B, Ruszkowski, M, Dauter, Z.
Deposit date:2018-04-09
Release date:2018-05-23
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural Analysis of Phosphoserine Aminotransferase (Isoform 1) FromArabidopsis thaliana- the Enzyme Involved in the Phosphorylated Pathway of Serine Biosynthesis.
Front Plant Sci, 9, 2018
6CD0
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BU of 6cd0 by Molmil
Crystal structure of Medicago truncatula serine hydroxymethyltransferase 3 (MtSHMT3), PLP-internal aldimine and apo form
Descriptor: ACETATE ION, FORMIC ACID, Serine hydroxymethyltransferase
Authors:Ruszkowski, M, Sekula, B, Ruszkowska, A, Dauter, Z.
Deposit date:2018-02-07
Release date:2018-05-23
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Chloroplastic Serine Hydroxymethyltransferase FromMedicago truncatula: A Structural Characterization.
Front Plant Sci, 9, 2018
6CZX
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BU of 6czx by Molmil
Crystal structure of Arabidopsis thaliana phosphoserine aminotransferase isoform 1 (AtPSAT1) in complex with PLP internal aldimine
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, DI(HYDROXYETHYL)ETHER, Phosphoserine aminotransferase 1, ...
Authors:Sekula, B, Ruszkowski, M, Dauter, Z.
Deposit date:2018-04-09
Release date:2018-05-23
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Structural Analysis of Phosphoserine Aminotransferase (Isoform 1) FromArabidopsis thaliana- the Enzyme Involved in the Phosphorylated Pathway of Serine Biosynthesis.
Front Plant Sci, 9, 2018
6CZZ
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BU of 6czz by Molmil
Crystal structure of Arabidopsis thaliana phosphoserine aminotransferase isoform 1 (AtPSAT1) in complex with PLP-phosphoserine geminal diamine intermediate
Descriptor: PHOSPHOSERINE, PYRIDOXAL-5'-PHOSPHATE, Phosphoserine aminotransferase 1, ...
Authors:Sekula, B, Ruszkowski, M, Dauter, Z.
Deposit date:2018-04-09
Release date:2018-05-23
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural Analysis of Phosphoserine Aminotransferase (Isoform 1) FromArabidopsis thaliana- the Enzyme Involved in the Phosphorylated Pathway of Serine Biosynthesis.
Front Plant Sci, 9, 2018
1FJ2
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BU of 1fj2 by Molmil
Crystal structure of the human acyl protein thioesterase 1 at 1.5 A resolution
Descriptor: BROMIDE ION, PROTEIN (ACYL PROTEIN THIOESTERASE 1)
Authors:Devedjiev, Y, Dauter, Z, Kuznetsov, S, Jones, T, Derewenda, Z.
Deposit date:2000-08-07
Release date:2000-11-29
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of the human acyl protein thioesterase I from a single X-ray data set to 1.5 A.
Structure Fold.Des., 8, 2000
1VZY
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BU of 1vzy by Molmil
Crystal structure of the Bacillus subtilis HSP33
Descriptor: 33 KDA CHAPERONIN, ACETATE ION, ZINC ION
Authors:Janda, I.K, Devedjiev, Y, Derewenda, U, Dauter, Z, Bielnicki, J, Cooper, D.R, Joachimiak, A, Derewenda, Z.S, Midwest Center for Structural Genomics (MCSG)
Deposit date:2004-05-29
Release date:2004-10-06
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:The crystal structure of the reduced, Zn2+-bound form of the B. subtilis Hsp33 chaperone and its implications for the activation mechanism.
Structure, 12, 2004

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