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PDB: 1951 件
6IBU
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Apo Crh5 transglycosylase
分子名称: GLYCEROL, Probable glycosidase crf1
著者Bartual, S.G, Fang, W, van Aalten, D.M.F.
登録日2018-11-30
公開日2019-02-27
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Mechanisms of redundancy and specificity of the Aspergillus fumigatus Crh transglycosylases.
Nat Commun, 10, 2019
1H9T
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FADR, FATTY ACID RESPONSIVE TRANSCRIPTION FACTOR FROM E. COLI IN COMPLEX WITH FADB OPERATOR
分子名称: 5'-D(*CP*AP*TP*CP*TP*GP*GP*TP*AP*CP*GP*AP* CP*CP*AP*GP*AP*TP*C)-3', 5'-D(*GP*AP*TP*CP*TP*GP*GP*TP*CP*GP*TP*AP* CP*CP*AP*GP*AP*TP*G)-3', CHLORIDE ION, ...
著者Van Aalten, D.M.F, Dirusso, C.C, Knudsen, J.
登録日2001-03-19
公開日2001-04-04
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (3.25 Å)
主引用文献The Structural Basis of Acyl Coenzyme A-Dependent Regulation of the Transcription Factor Fadr
Embo J., 20, 2001
1GSV
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Crystal structure of the P65 crystal form of photoactive yellow protein G47S mutant
分子名称: 4'-HYDROXYCINNAMIC ACID, PHOTOACTIVE YELLOW PROTEIN
著者Van Aalten, D.M.F, Crielaard, W, Hellingwerf, K.J, Joshua-Tor, L.
登録日2002-01-08
公開日2002-02-14
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Engineering Photocycle Dynamics: Crystal Structures and Kinetics of Three Photoactive Yellow Protein Hinge-Bending Mutants
J.Biol.Chem., 227, 2002
1HJV
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Crystal structure of hcgp-39 in complex with chitin tetramer
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Houston, D.R, Recklies, A.D, Krupa, J.C, Van Aalten, D.M.F.
登録日2003-02-28
公開日2003-03-11
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Structure and Ligand-Induced Conformational Change of the 39-kDa Glycoprotein from Human Articular Chondrocytes.
J.Biol.Chem., 278, 2003
1HJX
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Ligand-induced signalling and conformational change of the 39 kD glycoprotein from human articular chondrocytes
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHITINASE-3 LIKE PROTEIN 1, GLYCEROL, ...
著者Houston, D.R, Recklies, A.D, Krupa, J.C, Van Aalten, D.M.F.
登録日2003-02-28
公開日2003-03-11
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structure and Ligand-Induced Conformational Change of the 39-kDa Glycoprotein from Human Articular Chondrocytes
J.Biol.Chem., 278, 2003
1HNU
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CRYSTAL STRUCTURE OF PEROXISOMAL DELTA3-DELTA2-ENOYL-COA ISOMERASE FROM SACCHAROMYCES CEREVISIAE
分子名称: 1,2-ETHANEDIOL, D3,D2-ENOYL COA ISOMERASE ECI1, PERRHENATE
著者Mursula, A.M, van Aalten, D.M.F, Hiltunen, J.K, Wierenga, R.K.
登録日2000-12-08
公開日2001-06-20
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献The crystal structure of delta(3)-delta(2)-enoyl-CoA isomerase.
J.Mol.Biol., 309, 2001
6JIK
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Aspergillus fumigatus Rho1 GsGTP
分子名称: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, MAGNESIUM ION, Rho GTPase Rho1
著者Bartual, S.G, Van Aalten, D.M.F.
登録日2019-02-22
公開日2020-09-02
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Aspergillus fumigatus Rho1 gSGTP complex
To Be Published
1HKI
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Crystal structure of human chitinase in complex with glucoallosamidin B
分子名称: 2-acetamido-2-deoxy-6-O-methyl-alpha-D-allopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHITOTRIOSIDASE, METHYL N-ACETYL ALLOSAMINE
著者Rao, F.V, Houston, D.R, Boot, R.G, Aerts, J.M.F.G, Sakuda, S, Van Aalten, D.M.F.
登録日2003-03-10
公開日2004-03-11
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Crystal Structures of Allosamidin Derivatives in Complex with Human Macrophage Chitinase
J.Biol.Chem., 278, 2003
1HKJ
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Crystal structure of human chitinase in complex with methylallosamidin
分子名称: 2-acetamido-2-deoxy-6-O-methyl-alpha-D-allopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-allopyranose, ALLOSAMIZOLINE, CHITOTRIOSIDASE
著者Rao, F.V, Houston, D.R, Boot, R.G, Aerts, J.M.F.G, Sakuda, S, Van Aalten, D.M.F.
登録日2003-03-10
公開日2004-03-11
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal Structures of Allosamidin Derivatives in Complex with Human Macrophage Chitinase
J.Biol.Chem., 278, 2003
1HKK
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High resoultion crystal structure of human chitinase in complex with allosamidin
分子名称: 2-acetamido-2-deoxy-beta-D-allopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-allopyranose, ALLOSAMIZOLINE, CHITOTRIOSIDASE-1, ...
著者Rao, F.V, Houston, D.R, Boot, R.G, Aerts, J.M.F.G, Sakuda, S, Van Aalten, D.M.F.
登録日2003-03-10
公開日2004-03-11
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystal Structures of Allosamidin Derivatives in Complex with Human Macrophage Chitinase.
J.Biol.Chem., 278, 2003
1HNO
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CRYSTAL STRUCTURE OF PEROXISOMAL DELTA3-DELTA2-ENOYL-COA ISOMERASE FROM SACCHAROMYCES CEREVISIAE
分子名称: 1,2-ETHANEDIOL, D3,D2-ENOYL COA ISOMERASE ECI1
著者Mursula, A.M, van Aalten, D.M.F, Hiltunen, J.K, Wierenga, R.K.
登録日2000-12-08
公開日2001-06-20
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The crystal structure of delta(3)-delta(2)-enoyl-CoA isomerase.
J.Mol.Biol., 309, 2001
1HKM
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High resolution crystal structure of human chitinase in complex with demethylallosamidin
分子名称: 2-acetamido-2-deoxy-beta-D-allopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-allopyranose, CHITOTRIOSIDASE, METHYL N-ACETYL ALLOSAMINE
著者Rao, F.V, Houston, D.R, Boot, R.G, Aerts, J.M.F.G, Sakuda, S, Van Aalten, D.M.F.
登録日2003-03-10
公開日2004-03-11
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Crystal Structures of Allosamidin Derivatives in Complex with Human Macrophage Chitinase
J.Biol.Chem., 278, 2003
6HBT
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The structure of the G. violaceus guanidine II riboswitch P2 stem-loop with arcaine
分子名称: 1-(4-carbamimidamidobutyl)guanidine, RNA (5'-R(*GP*GP*UP*GP*GP*GP*GP*AP*CP*GP*AP*CP*CP*CP*CP*AP*(CBV)P*C)-3'), SULFATE ION
著者Huang, L, Lilley, D.M.J.
登録日2018-08-13
公開日2019-02-20
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献Structure-guided design of a high-affinity ligand for a riboswitch.
Rna, 25, 2019
7EAG
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BU of 7eag by Molmil
Crystal structure of the RAGATH-18 k-turn
分子名称: RNA (5'-R(*GP*UP*CP*UP*AP*UP*GP*AP*AP*GP*GP*CP*UP*GP*GP*AP*GP*AP*C)-3')
著者Huang, L, Lilley, D.M.J.
登録日2021-03-07
公開日2021-06-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure and folding of four putative kink turns identified in structured RNA species in a test of structural prediction rules.
Nucleic Acids Res., 49, 2021
7EAF
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Crystal structure of SAM-I riboswitch with the Actinomyces-1 k-turn
分子名称: BARIUM ION, RNA (94-MER), S-ADENOSYLMETHIONINE, ...
著者Huang, L, Lilley, D.M.J.
登録日2021-03-07
公開日2021-06-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Structure and folding of four putative kink turns identified in structured RNA species in a test of structural prediction rules.
Nucleic Acids Res., 49, 2021
6HBX
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The structure of the G. violaceus guanidine II riboswitch P2 stem-loop with ethylguanidine
分子名称: N-ETHYLGUANIDINE, RNA (5'-R(*GP*GP*UP*GP*GP*GP*GP*AP*CP*GP*AP*CP*CP*CP*CP*AP*(CBV)P*C)-3'), SODIUM ION, ...
著者Huang, L, Lilley, D.M.J.
登録日2018-08-13
公開日2019-02-20
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献Structure-guided design of a high-affinity ligand for a riboswitch.
Rna, 25, 2019
6IBW
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Crh5 transglycosylase in complex with NAG
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Probable glycosidase crf1
著者Fang, W, Bartual, S.G, van Aalten, D.M.F.
登録日2018-12-01
公開日2019-02-27
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Mechanisms of redundancy and specificity of the Aspergillus fumigatus Crh transglycosylases.
Nat Commun, 10, 2019
6R47
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The structure of pistol ribozyme bound to magnesium
分子名称: MAGNESIUM ION, RNA, RNA (50-MER)
著者Lilley, D.M.J, Wilson, T.M, Liu, Y.
登録日2019-03-22
公開日2019-07-03
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Comparison of the Structures and Mechanisms of the Pistol and Hammerhead Ribozymes.
J.Am.Chem.Soc., 141, 2019
6TFG
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Crystal structure of the ADP-binding domain of the NAD+ riboswitch with Adenosine 3-phosphate 5-phosphosulfate (APPS)
分子名称: 3'-PHOSPHATE-ADENOSINE-5'-PHOSPHATE SULFATE, Chains: A, MAGNESIUM ION, ...
著者Huang, L, Lilley, D.M.J.
登録日2019-11-14
公開日2020-09-23
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Structure and ligand binding of the ADP-binding domain of the NAD+ riboswitch.
Rna, 26, 2020
6TF1
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Crystal structure of the ADP-binding domain of the NAD+ riboswitch with Adenosine diphosphate (ADP)
分子名称: ADENOSINE-5'-DIPHOSPHATE, Chains: A, MAGNESIUM ION, ...
著者Huang, L, Lilley, D.M.J.
登録日2019-11-12
公開日2020-09-23
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure and ligand binding of the ADP-binding domain of the NAD+ riboswitch.
Rna, 26, 2020
6TFF
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Crystal structure of the ADP-binding domain of the NAD+ riboswitch with Nicotinamide adenine dinucleotide (NAD+)
分子名称: BROMIDE ION, Chains: A, MAGNESIUM ION, ...
著者Huang, L, Lilley, D.M.J.
登録日2019-11-14
公開日2020-09-23
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.52 Å)
主引用文献Structure and ligand binding of the ADP-binding domain of the NAD+ riboswitch.
Rna, 26, 2020
6TF0
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Crystal structure of the ADP-binding domain of the NAD+ riboswitch with Nicotinamide adenine dinucleotide, reduced (NADH)
分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Chains: A, MAGNESIUM ION, ...
著者Huang, L, Lilley, D.M.J.
登録日2019-11-12
公開日2020-09-23
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure and ligand binding of the ADP-binding domain of the NAD+ riboswitch.
Rna, 26, 2020
6TF3
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Crystal structure of the ADP-binding domain of the NAD+ riboswitch with Cordycepin 5-triphosphate (3-dATP)
分子名称: 3'-DEOXYADENOSINE-5'-TRIPHOSPHATE, Chains: A, MAGNESIUM ION, ...
著者Huang, L, Lilley, D.M.J.
登録日2019-11-13
公開日2020-09-23
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.66 Å)
主引用文献Structure and ligand binding of the ADP-binding domain of the NAD+ riboswitch.
Rna, 26, 2020
6TFE
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Crystal structure of the ADP-binding domain of the NAD+ riboswitch with N6-Methyl-adenosine-5'-triphosphate (m6ATP)
分子名称: BROMIDE ION, Chains: A, MAGNESIUM ION, ...
著者Huang, L, Lilley, D.M.J.
登録日2019-11-14
公開日2020-09-23
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure and ligand binding of the ADP-binding domain of the NAD+ riboswitch.
Rna, 26, 2020
6HC5
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The structure of the G. violaceus guanidine II riboswitch P2 stem-loop with audouine
分子名称: 1-(5-carbamimidamidopentyl)guanidine, RNA (5'-R(*GP*GP*UP*GP*GP*GP*GP*AP*CP*GP*AP*CP*CP*CP*CP*AP*(CBV)P*C)-3'), SODIUM ION, ...
著者Huang, L, Lilley, D.M.J.
登録日2018-08-14
公開日2019-02-20
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.413 Å)
主引用文献Structure-guided design of a high-affinity ligand for a riboswitch.
Rna, 25, 2019

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