Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 1951 件

5UUI
DownloadVisualize
BU of 5uui by Molmil
Crystal Structure of Spin-Labeled T77C TNFa
分子名称: S-[(1-oxyl-2,2,5,5-tetramethyl-2,5-dihydro-1H-pyrrol-3-yl)methyl] methanesulfonothioate, Tumor necrosis factor
著者Horanyi, P.S, Dranow, D.M, Ceska, T.
登録日2017-02-16
公開日2017-08-02
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Natural Conformational Sampling of Human TNF alpha Visualized by Double Electron-Electron Resonance.
Biophys. J., 113, 2017
4G1H
DownloadVisualize
BU of 4g1h by Molmil
Group B Streptococcus Pilus Island 1 Sortase C2
分子名称: CALCIUM ION, Sortase family protein
著者Cozzi, R, Prigozhin, D.M, Alber, T.
登録日2012-07-10
公開日2012-12-05
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural basis for group B streptococcus pilus 1 sortases C regulation and specificity.
Plos One, 7, 2012
4G1J
DownloadVisualize
BU of 4g1j by Molmil
Sortase C1 of GBS Pilus Island 1
分子名称: Sortase family protein
著者Cozzi, R, Prigozhin, D.M, Alber, T.
登録日2012-07-10
公開日2012-12-05
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structural basis for group B streptococcus pilus 1 sortases C regulation and specificity.
Plos One, 7, 2012
8ITS
DownloadVisualize
BU of 8its by Molmil
Crystal structure of DUF-3268 k-junction
分子名称: MAGNESIUM ION, RNA (46-MER)
著者Li, M, Lilley, D.M.J, Huang, L.
登録日2023-03-22
公開日2024-03-27
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Crystal structure of DUF-3268 k-junction
To Be Published
6Z2F
DownloadVisualize
BU of 6z2f by Molmil
Crystal structure of human AGX1 mutant complexed with UDPGLCNAC
分子名称: UDP-N-acetylhexosamine pyrophosphorylase, URIDINE-DIPHOSPHATE-N-ACETYLGLUCOSAMINE
著者Chen, X, van Aalten, D.M.F.
登録日2020-05-15
公開日2021-05-26
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of human AGX1 mutant complexed with UDPGLCNAC
To Be Published
3BYR
DownloadVisualize
BU of 3byr by Molmil
Mode of Action of a Putative Zinc Transporter CzrB (Zn form)
分子名称: CzrB protein, ZINC ION
著者Cherezov, V, Srinivasan, V, Szebenyi, D.M.E, Caffrey, M.
登録日2008-01-16
公開日2008-09-23
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Insights into the Mode of Action of a Putative Zinc Transporter CzrB in Thermus thermophilus
Structure, 16, 2008
3BYP
DownloadVisualize
BU of 3byp by Molmil
Mode of Action of a Putative Zinc Transporter CzrB
分子名称: CzrB protein, SULFATE ION
著者Cherezov, V, Srinivasan, V, Szebenyi, D.M.E, Caffrey, M.
登録日2008-01-16
公開日2008-09-23
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Insights into the Mode of Action of a Putative Zinc Transporter CzrB in Thermus thermophilus
Structure, 16, 2008
1R12
DownloadVisualize
BU of 1r12 by Molmil
Native Aplysia ADP ribosyl cyclase
分子名称: ADP-ribosyl cyclase
著者Love, M.L, Szebenyi, D.M.E, Kriksunov, I.A, Thiel, D.J, Munshi, C, Graeff, R, Lee, H.C, Hao, Q.
登録日2003-09-23
公開日2004-03-09
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献ADP-ribosyl cyclase; crystal structures reveal a covalent intermediate.
Structure, 12, 2004
1R0S
DownloadVisualize
BU of 1r0s by Molmil
Crystal structure of ADP-ribosyl cyclase Glu179Ala mutant
分子名称: ADP-ribosyl cyclase
著者Love, M.L, Szebenyi, D.M.E, Kriksunov, I.A, Thiel, D.J, Munshi, C, Graeff, R, Lee, H.C, Hao, Q.
登録日2003-09-22
公開日2004-03-09
最終更新日2021-10-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献ADP-ribosyl cyclase; crystal structures reveal a covalent intermediate.
Structure, 12, 2004
6EOU
DownloadVisualize
BU of 6eou by Molmil
O-GlcNAc transferase TPR domain with the intellectual disability associated mutation L254F
分子名称: UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit
著者Gundogdu, M, van Aalten, D.M.F.
登録日2017-10-10
公開日2018-05-09
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献The O-GlcNAc Transferase Intellectual Disability Mutation L254F Distorts the TPR Helix.
Cell Chem Biol, 25, 2018
5OQA
DownloadVisualize
BU of 5oqa by Molmil
XFEL structure of the off state of a reversibly photoswitching fluorescent protein determined using the GDVN injection method
分子名称: Green to red photoconvertible GFP-like protein EosFP
著者Hutchison, C.D.M, Cordon-Preciado, V, Morgan, R.M.L, van Thor, J.J.
登録日2017-08-11
公開日2017-12-06
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献X-ray Free Electron Laser Determination of Crystal Structures of Dark and Light States of a Reversibly Photoswitching Fluorescent Protein at Room Temperature.
Int J Mol Sci, 18, 2017
5OOZ
DownloadVisualize
BU of 5ooz by Molmil
XFEL structure of the on state of a reversibly photoswitching fluorescent protein determined using the grease injection method
分子名称: Green to red photoconvertible GFP-like protein EosFP
著者Hutchison, C.D.M, Cordon-Preciado, V, Morgan, R.M.L, van Thor, J.J.
登録日2017-08-09
公開日2017-12-06
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献X-ray Free Electron Laser Determination of Crystal Structures of Dark and Light States of a Reversibly Photoswitching Fluorescent Protein at Room Temperature.
Int J Mol Sci, 18, 2017
5OQE
DownloadVisualize
BU of 5oqe by Molmil
XFEL structure of the on state of a reversibly photoswitching fluorescent protein determined using the droplet injection method
分子名称: Green to red photoconvertible GFP-like protein EosFP
著者Hutchison, C.D.M, Cordon-Preciado, V, Morgan, R.M.L, van Thor, J.J.
登録日2017-08-11
公開日2017-12-06
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献X-ray Free Electron Laser Determination of Crystal Structures of Dark and Light States of a Reversibly Photoswitching Fluorescent Protein at Room Temperature.
Int J Mol Sci, 18, 2017
5OXD
DownloadVisualize
BU of 5oxd by Molmil
Complex of a C. perfringens O-GlcNAcase with a fragment hit
分子名称: 5-(trifluoromethyl)-2,3-dihydro-1~{H}-1,4-diazepine, CADMIUM ION, O-GlcNAcase NagJ
著者Rafie, K, van Aalten, D.M.F.
登録日2017-09-06
公開日2018-05-16
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献O-GlcNAcase Fragment Discovery with Fluorescence Polarimetry.
ACS Chem. Biol., 13, 2018
5OQ9
DownloadVisualize
BU of 5oq9 by Molmil
XFEL structure of the off state of a reversibly photoswitching fluorescent protein determined using the droplet on demand injection method
分子名称: Green to red photoconvertible GFP-like protein EosFP
著者Hutchison, C.D.M, Cordon-Preciado, V, Morgan, R.M.L, van Thor, J.J.
登録日2017-08-11
公開日2017-12-06
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.51 Å)
主引用文献X-ray Free Electron Laser Determination of Crystal Structures of Dark and Light States of a Reversibly Photoswitching Fluorescent Protein at Room Temperature.
Int J Mol Sci, 18, 2017
2A3C
DownloadVisualize
BU of 2a3c by Molmil
Crystal structure of Aspergillus fumigatus chitinase B1 in complex with pentoxifylline
分子名称: 3,7-DIMETHYL-1-(5-OXOHEXYL)-3,7-DIHYDRO-1H-PURINE-2,6-DIONE, SULFATE ION, chitinase
著者Rao, F.V, Andersen, O.A, Vora, K.A, DeMartino, J.A, van Aalten, D.M.F.
登録日2005-06-24
公開日2005-09-27
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献Methylxanthine drugs are chitinase inhibitors: investigation of inhibition and binding modes.
Chem.Biol., 12, 2005
2A3E
DownloadVisualize
BU of 2a3e by Molmil
Crystal structure of Aspergillus fumigatus chitinase B1 in complex with allosamidin
分子名称: 2-acetamido-2-deoxy-beta-D-allopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-allopyranose, ALLOSAMIZOLINE, SULFATE ION, ...
著者Rao, F.V, Andersen, O.A, Vora, K.A, DeMartino, J.A, van Aalten, D.M.F.
登録日2005-06-24
公開日2005-09-27
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Methylxanthine drugs are chitinase inhibitors: investigation of inhibition and binding modes.
Chem.Biol., 12, 2005
2A3B
DownloadVisualize
BU of 2a3b by Molmil
Crystal structure of Aspergillus fumigatus chitinase B1 in complex with caffeine
分子名称: CAFFEINE, SULFATE ION, chitinase
著者Rao, F.V, Andersen, O.A, Vora, K.A, DeMartino, J.A, van Aalten, D.M.F.
登録日2005-06-24
公開日2005-09-27
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Methylxanthine drugs are chitinase inhibitors: investigation of inhibition and binding modes.
Chem.Biol., 12, 2005
3ZWJ
DownloadVisualize
BU of 3zwj by Molmil
CRYSTAL STRUCTURE OF THE PORE-FORMING TOXIN FRAC FROM ACTINIA FRAGACEA (Form 3)
分子名称: FRAGACEATOXIN C
著者Mechaly, A.E, Bellomioa, A, Morantea, K, Gonzalez-Manas, J.M, Guerin, D.M.A.
登録日2011-08-01
公開日2012-07-04
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.37 Å)
主引用文献Pores of the Toxin Frac Assemble Into 2D Hexagonal Clusters in Both Crystal Structures and Model Membranes.
J.Struct.Biol., 180, 2012
3ZWG
DownloadVisualize
BU of 3zwg by Molmil
Crystal structure of the pore-forming toxin FraC from Actinia fragacea (form 2)
分子名称: FRAGACEATOXIN C
著者Mechaly, A.E, Bellomio, A, Morante, K, Gonzalez-Manas, J.M, Guerin, D.M.A.
登録日2011-07-29
公開日2012-07-04
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Pores of the Toxin Frac Assemble Into 2D Hexagonal Clusters in Both Crystal Structures and Model Membranes.
J.Struct.Biol., 180, 2012
8HBA
DownloadVisualize
BU of 8hba by Molmil
Crystal structure of NAD-II riboswitch (single strand) with NAD
分子名称: BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, RNA (55-MER)
著者Peng, X, Lilley, D.M.J, Huang, L.
登録日2022-10-27
公開日2023-03-22
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.64 Å)
主引用文献Crystal structures of the NAD+-II riboswitch reveal two distinct ligand-binding pockets.
Nucleic Acids Res., 51, 2023
8HB1
DownloadVisualize
BU of 8hb1 by Molmil
Crystal structure of NAD-II riboswitch (two strands) with NMN
分子名称: BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE, MAGNESIUM ION, RNA (30-MER), ...
著者Peng, X, Lilley, D.M.J, Huang, L.
登録日2022-10-27
公開日2023-03-22
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.23 Å)
主引用文献Crystal structures of the NAD+-II riboswitch reveal two distinct ligand-binding pockets.
Nucleic Acids Res., 51, 2023
8HB3
DownloadVisualize
BU of 8hb3 by Molmil
Crystal structure of NAD-II riboswitch (two strands) with NR
分子名称: Nicotinamide riboside, RNA (31-MER), RNA (5'-R(*AP*GP*AP*GP*CP*GP*UP*UP*GP*CP*GP*UP*CP*CP*GP*AP*AP*AP*GP*UP*(CBV)P*GP*CP*C)-3')
著者Peng, X, Lilley, D.M.J, Huang, L.
登録日2022-10-27
公開日2023-03-22
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.87 Å)
主引用文献Crystal structures of the NAD+-II riboswitch reveal two distinct ligand-binding pockets.
Nucleic Acids Res., 51, 2023
8HB8
DownloadVisualize
BU of 8hb8 by Molmil
Crystal structure of NAD-II riboswitch (single strand) with NMN
分子名称: BARIUM ION, BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE, RNA (55-MER)
著者Peng, X, Lilley, D.M.J, Huang, L.
登録日2022-10-27
公開日2023-03-22
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structures of the NAD+-II riboswitch reveal two distinct ligand-binding pockets.
Nucleic Acids Res., 51, 2023
7NE1
DownloadVisualize
BU of 7ne1 by Molmil
Structure of the complex between Netrin-1 and its receptor Neogenin
分子名称: 1,3,4,6-tetra-O-sulfo-beta-D-fructofuranose-(2-1)-2,3,4,6-tetra-O-sulfonato-alpha-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Robinson, R.A, Griffiths, S.C, van de Haar, L.L, Malinauskas, T, van Battum, E.Y, Zelina, P, Schwab, R.A, Karia, D, Malinauskaite, L, Brignani, S, van den Munkhof, M, Dudukcu, O, De Ruiter, A.A, Van den Heuvel, D.M.A, Bishop, B, Elegheert, J, Aricescu, A.R, Pasterkamp, R.J, Siebold, C.
登録日2021-02-02
公開日2021-03-31
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献Simultaneous binding of Guidance Cues NET1 and RGM blocks extracellular NEO1 signaling.
Cell, 184, 2021

226707

件を2024-10-30に公開中

PDB statisticsPDBj update infoContact PDBjnumon