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PDB: 3016 件

2KBM
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Ca-S100A1 interacting with TRTK12
分子名称: CALCIUM ION, F-actin-capping protein subunit alpha-2, Protein S100-A1
著者Wright, N.T, Varney, K.M, Cannon, B.R, Morgan, M, Weber, D.J.
登録日2008-12-02
公開日2009-02-10
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution structure of Ca-S100A1-TRTK12
To be Published
6PC5
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E. coli 50S ribosome bound to compounds 46 and VS1
分子名称: (2R)-2-[(3S,4R,5E,10E,12E,14S,16R,26aR)-16-fluoro-14-hydroxy-4,12-dimethyl-1,7,22-trioxo-4,7,8,9,14,15,16,17,24,25,26,26a-dodecahydro-1H,3H,22H-21,18-(azeno)pyrrolo[2,1-c][1,8,4,19]dioxadiazacyclotetracosin-3-yl]propyl isoquinolin-3-ylcarbamate, 23S ribosomal RNA, 50S ribosomal protein L13, ...
著者Pellegrino, J, Lee, D.J, Fraser, J.S, Seiple, I.B.
登録日2019-06-16
公開日2020-06-17
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Synthetic group A streptogramin antibiotics that overcome Vat resistance.
Nature, 586, 2020
6PF7
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Crystal structure of TS-DHFR from Cryptosporidium hominis in complex with NADPH, FdUMP and 2-(4-((2-amino-4-oxo-4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidin-5-yl)methyl)benzamido)benzoic acid
分子名称: 2-({4-[(2-amino-4-oxo-4,7-dihydro-1H-pyrrolo[2,3-d]pyrimidin-5-yl)methyl]benzene-1-carbonyl}amino)benzoic acid, 5-FLUORO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE, Bifunctional dihydrofolate reductase-thymidylate synthase, ...
著者Czyzyk, D.J, Valhondo, M, Jorgensen, W.L, Anderson, K.S.
登録日2019-06-21
公開日2019-10-02
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.795 Å)
主引用文献Structure activity relationship towards design of cryptosporidium specific thymidylate synthase inhibitors.
Eur.J.Med.Chem., 183, 2019
2KUK
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Solution structure of vhl-2
分子名称: Leaf cyclotide 2
著者Daly, N.L, Chen, B, Nguyencong, P, Craik, D.J.
登録日2010-02-18
公開日2011-01-12
最終更新日2011-07-13
実験手法SOLUTION NMR
主引用文献Structure and Activity of the Leaf-Specific Cyclotide vhl-2
AUST.J.CHEM., 63, 2010
6Q4D
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CDK2 in complex with FragLite31
分子名称: 2-(4-bromanyl-2-methoxy-phenyl)ethanoic acid, Cyclin-dependent kinase 2
著者Wood, D.J, Martin, M.P, Noble, M.E.M.
登録日2018-12-05
公開日2019-03-20
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.07 Å)
主引用文献FragLites-Minimal, Halogenated Fragments Displaying Pharmacophore Doublets. An Efficient Approach to Druggability Assessment and Hit Generation.
J.Med.Chem., 62, 2019
2KYO
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Dimeric human ckit-2 proto-oncogene promoter quadruplex DNA NMR, 10 structures
分子名称: 5'-D(*CP*GP*GP*GP*CP*GP*GP*GP*CP*GP*CP*GP*AP*GP*GP*GP*AP*GP*GP*GP*T)-3'
著者Kuryavyi, V, Phan, A.T, Patel, D.J.
登録日2010-06-05
公開日2010-06-30
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution structures of all parallel-stranded monomeric and dimeric G-quadruplex scaffolds of the human c-kit2 promoter.
Nucleic Acids Res., 38, 2010
2LJS
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Solution structure of MCoTI-V
分子名称: Trypsin inhibitor 3
著者Daly, N.L, Craik, D.J.
登録日2011-09-23
公開日2012-08-08
最終更新日2019-12-25
実験手法SOLUTION NMR
主引用文献Cyclic Peptides Arising by Evolutionary Parallelism via Asparaginyl-Endopeptidase-Mediated Biosynthesis.
Plant Cell, 24, 2012
2NQJ
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Crystal structure of Escherichia coli endonuclease IV (Endo IV) E261Q mutant bound to damaged DNA
分子名称: 5'-D(*CP*GP*TP*CP*GP*TP*CP*GP*GP*GP*GP*AP*CP*GP*C)-3', 5'-D(*GP*CP*GP*TP*CP*CP*(3DR)P*CP*GP*AP*CP*GP*AP*CP*G)-3', Endonuclease 4, ...
著者Garcin-Hosfield, E.D, Hosfield, D.J, Tainer, J.A.
登録日2006-10-31
公開日2007-11-06
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献DNA apurinic-apyrimidinic site binding and excision by endonuclease IV.
Nat.Struct.Mol.Biol., 15, 2008
2NQ9
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High resolution crystal structure of Escherichia coli endonuclease IV (Endo IV) Y72A mutant bound to damaged DNA
分子名称: 5'-D(*AP*TP*AP*TP*CP*T)-3', 5'-D(*AP*TP*CP*TP*GP*AP*AP*GP*TP*AP*T)-3', 5'-D(P*(3DR)P*AP*GP*AP*T)-3', ...
著者Garcin-Hosfield, E.D, Hosfield, D.J, Tainer, J.A.
登録日2006-10-30
公開日2007-11-13
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献DNA apurinic-apyrimidinic site binding and excision by endonuclease IV.
Nat.Struct.Mol.Biol., 15, 2008
6PCR
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E. coli 50S ribosome bound to compound 40o
分子名称: (2R)-2-[(3S,4R,5E,10E,12E,14S,26aR)-14-hydroxy-4,12-dimethyl-1,7,16,22-tetraoxo-4,7,8,9,14,15,16,17,24,25,26,26a-dodecahydro-1H,3H,22H-21,18-(azeno)pyrrolo[2,1-c][1,8,4,19]dioxadiazacyclotetracosin-3-yl]propyl (2-bromopyridin-4-yl)carbamate, 23S ribosomal RNA, 50S ribosomal protein L13, ...
著者Pellegrino, J, Lee, D.J, Fraser, J.S, Seiple, I.B.
登録日2019-06-18
公開日2020-06-17
最終更新日2020-10-07
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Synthetic group A streptogramin antibiotics that overcome Vat resistance.
Nature, 586, 2020
2NA5
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NMR solution structure of vitamin B12 conjugates of PYY3-36
分子名称: CYANOCOBALAMIN, Peptide YY
著者Doyle, R.P, Henry, K.E, Roth, C.L, Kerwood, D.J, Allis, D.G, Holz, G.G, Zubieta, J.
登録日2015-12-21
公開日2016-09-21
最終更新日2023-11-15
実験手法SOLUTION NMR
主引用文献Solution Structure and Constrained Molecular Dynamics Study of Vitamin B12 Conjugates of the Anorectic Peptide PYY(3-36).
Chemmedchem, 11, 2016
2N5H
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PltL-holo
分子名称: 4'-PHOSPHOPANTETHEINE, Peptidyl carrier protein PltL
著者Jaremko, M.J, Lee, D.J, Burkart, M.D.
登録日2015-07-17
公開日2015-09-16
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Structure and Substrate Sequestration in the Pyoluteorin Type II Peptidyl Carrier Protein PltL.
J.Am.Chem.Soc., 137, 2015
6R8H
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Triosephosphate isomerase from liver fluke (Fasciola hepatica).
分子名称: SULFATE ION, Triosephosphate isomerase
著者Ferraro, F, Corvo, I, Bergalli, L, Ilarraz, A, Cabrera, M, Gil, J, Susuki, B, Caffrey, C, Timson, D.J, Robert, X, Guillon, C, Alvarez, G.
登録日2019-04-01
公開日2020-02-12
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Novel and selective inactivators of Triosephosphate isomerase with anti-trematode activity.
Sci Rep, 10, 2020
6R7R
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Crystal structure of the glutamate transporter homologue GltTk in complex with D-aspartate
分子名称: D-ASPARTIC ACID, DECYL-BETA-D-MALTOPYRANOSIDE, DI(HYDROXYETHYL)ETHER, ...
著者Arkhipova, V, Guskov, A, Slotboom, D.J.
登録日2019-03-29
公開日2019-04-17
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Binding and transport of D-aspartate by the glutamate transporter homolog Glt Tk .
Elife, 8, 2019
6RA0
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A ubiquitin-like dimerization domain controls protein kinase D activation by trans-autophosphorylation
分子名称: Serine/threonine-protein kinase dkf-1, ZINC ION
著者Elsner, D.J, Leonard, T.A.
登録日2019-04-05
公開日2019-08-14
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献A ubiquitin-like domain controls protein kinase D dimerization and activation by trans-autophosphorylation.
J.Biol.Chem., 294, 2019
2NQH
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High Resolution crystal structure of Escherichia coli endonuclease IV (Endo IV) E261Q mutant
分子名称: Endonuclease 4, PHOSPHATE ION, ZINC ION
著者Garcin-Hosfield, E.D, Hosfield, D.J, Tainer, J.A.
登録日2006-10-31
公開日2007-11-06
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献DNA apurinic-apyrimidinic site binding and excision by endonuclease IV.
Nat.Struct.Mol.Biol., 15, 2008
6RKD
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Molybdenum storage protein under turnover conditions
分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, MO(VI)(=O)(OH)2 CLUSTER, ...
著者Bruenle, S, Mills, D.J, Vonck, J, Ermler, U.
登録日2019-04-30
公開日2019-12-18
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Molybdate pumping into the molybdenum storage protein via an ATP-powered piercing mechanism.
Proc.Natl.Acad.Sci.USA, 2019
2N5G
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NMR structure of KorA, a plasmid-encoded, global transcription regulator KorA
分子名称: TrfB transcriptional repressor protein
著者Rajasekar, K.V, Lovering, A.L, Dancea, F.V, Scott, D.J, Harris, S, Bingle, L.E, Roessle, M, Thomas, C.M, Hyde, E.I, White, S.A.
登録日2015-07-17
公開日2016-07-20
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Flexibility of KorA, a plasmid-encoded, global transcription regulator, in the presence and the absence of its operator.
Nucleic Acids Res., 44, 2016
2N5I
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PltL-pyrrolyl
分子名称: (3R)-3-hydroxy-2,2-dimethyl-4-oxo-4-{[3-oxo-3-({2-[(1H-pyrrol-2-ylcarbonyl)amino]ethyl}amino)propyl]amino}butyl dihydrogen phosphate, Peptidyl carrier protein PltL
著者Jaremko, M.J, Lee, D.J, Burkart, M.D.
登録日2015-07-17
公開日2015-09-16
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Structure and Substrate Sequestration in the Pyoluteorin Type II Peptidyl Carrier Protein PltL.
J.Am.Chem.Soc., 137, 2015
2K2F
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Solution structure of Ca2+-S100A1-RyRP12
分子名称: CALCIUM ION, Protein S100-A1, Ryanodine receptor 1 peptide
著者Wright, N.T, Varney, K.M, Weber, D.J.
登録日2008-04-01
公開日2008-07-29
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献S100A1 and Calmodulin Compete for the Same Binding Site on Ryanodine Receptor.
J.Biol.Chem., 283, 2008
2JSQ
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Monomeric Human Telomere DNA Tetraplex with 3+1 Strand Fold Topology, Two Edgewise Loops and Double-Chain Reversal Loop, Form 2 15BrG, NMR, 10 Structures
分子名称: HUMAN TELOMERE DNA
著者Kuryavyi, V.V, Phan, A.T, Luu, K.N, Patel, D.J.
登録日2007-07-11
公開日2008-07-15
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Structure of two intramolecular G-quadruplexes formed by natural human telomere sequences in K+ solution.
Nucleic Acids Res., 35, 2007
2JXR
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STRUCTURE OF YEAST PROTEINASE A
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, N-(morpholin-4-ylcarbonyl)-L-phenylalanyl-N-[(1R)-1-(cyclohexylmethyl)-3,3-difluoro-2,2-dihydroxy-4-(methylamino)-4-oxobutyl]-L-norleucinamide, PROTEINASE A, ...
著者Aguilar, C.F, Badasso, M, Dreyer, T, Cronin, N.B, Newman, M.P, Cooper, J.B, Hoover, D.J, Wood, S.P, Johnson, M.S, Blundell, T.L.
登録日1997-04-24
公開日1997-10-29
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The three-dimensional structure at 2.4 A resolution of glycosylated proteinase A from the lysosome-like vacuole of Saccharomyces cerevisiae.
J.Mol.Biol., 267, 1997
2JUB
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Solution structure of IPI*
分子名称: Internal protein I
著者Rifat, D, Wright, N.T, Varney, K.M, Weber, D.J, Black, L.W.
登録日2007-08-17
公開日2007-12-11
最終更新日2024-05-08
実験手法SOLUTION NMR
主引用文献Restriction endonuclease inhibitor IPI* of bacteriophage T4: a novel structure for a dedicated target.
J.Mol.Biol., 375, 2008
2O4C
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Crystal Structure of D-Erythronate-4-phosphate Dehydrogenase Complexed with NAD
分子名称: Erythronate-4-phosphate dehydrogenase, GLYCEROL, L(+)-TARTARIC ACID, ...
著者Ha, J.Y, Lee, J.H, Kim, K.H, Kim, D.J, Lee, H.H, Kim, H.K, Yoon, H.J, Suh, S.W.
登録日2006-12-04
公開日2007-02-20
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structure of d-Erythronate-4-phosphate Dehydrogenase Complexed with NAD
J.Mol.Biol., 366, 2007
2OE6
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2.4A X-ray crystal structure of unliganded RNA fragment GGGCGUCGCUAGUACC/CGGUACUAAAAGUCGCC containing the human ribosomal decoding A site: RNA construct with 5'-overhang
分子名称: RNA (5'-R(*CP*GP*GP*UP*AP*CP*UP*AP*AP*AP*AP*GP*UP*CP*GP*CP*C)-3'), RNA (5'-R(*GP*GP*GP*CP*GP*UP*CP*GP*CP*UP*AP*GP*UP*AP*CP*C)-3')
著者Hermann, T, Tereshko, V, Skripkin, E, Patel, D.J.
登録日2006-12-28
公開日2007-02-13
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Apramycin recognition by the human ribosomal decoding site.
Blood Cells Mol.Dis., 38, 2007

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