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PDB: 2998 results

2B4Q
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Pseudomonas aeruginosa RhlG/NADP active-site complex
Descriptor: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Rhamnolipids biosynthesis 3-oxoacyl-[acyl-carrier-protein] reductase
Authors:Miller, D.J, White, S.W.
Deposit date:2005-09-26
Release date:2006-05-02
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of RhlG, an Essential beta-Ketoacyl Reductase in the Rhamnolipid Biosynthetic Pathway of Pseudomonas aeruginosa.
J.Biol.Chem., 281, 2006
2ATG
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NMR structure of Retrocyclin-2 in SDS
Descriptor: Retrocyclin-2
Authors:Daly, N.L, Chen, Y.K, Rosengren, K.J, Marx, U.C, Phillips, M.L, Waring, A.J, Wang, W, Lehrer, R.I, Craik, D.J.
Deposit date:2005-08-24
Release date:2005-09-06
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Retrocyclin-2: structural analysis of a potent anti-HIV theta-defensin
Biochemistry, 46, 2007
2AHX
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Crystal structure of ErbB4/HER4 extracellular domain
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Receptor tyrosine-protein kinase erbB-4, SULFATE ION, ...
Authors:Bouyain, S, Longo, P.A, Li, S, Ferguson, K.M, Leahy, D.J.
Deposit date:2005-07-28
Release date:2005-09-27
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.396 Å)
Cite:The extracellular region of ErbB4 adopts a tethered conformation in the absence of ligand
Proc.Natl.Acad.Sci.USA, 102, 2005
1OSW
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BU of 1osw by Molmil
The Stem of SL1 RNA in HIV-1: Structure and Nucleocapsid Protein Binding for a 1X3 Internal Loop
Descriptor: 5'-R(*GP*GP*AP*GP*GP*CP*GP*CP*UP*AP*CP*GP*GP*CP*GP*AP*GP*GP*CP*UP*CP*CP*A)-3'
Authors:Yuan, Y, Kerwood, D.J, Paoletti, A.C, Shubsda, M.F, Borer, P.N.
Deposit date:2003-03-20
Release date:2003-05-20
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Stem of SL1 RNA in HIV-1: Structure and Nucleocapsid Protein Binding for a 1X3 Internal Loop
Biochemistry, 42, 2003
4HJL
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Naphthalene 1,2-Dioxygenase bound to 1-chloronaphthalene
Descriptor: 1,2-ETHANEDIOL, 1-chloronaphthalene, FE (III) ION, ...
Authors:Ferraro, D.J, Ramaswamy, S.
Deposit date:2012-10-12
Release date:2013-10-16
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Naphthalene 1,2-Dioxygenase bound to 1-chloronaphthalene
TO BE PUBLISHED
4HM7
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Naphthalene 1,2-Dioxygenase bound to styrene
Descriptor: 1,2-ETHANEDIOL, FE (III) ION, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Ferraro, D.J, Ramaswamy, S.
Deposit date:2012-10-17
Release date:2013-10-30
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Naphthalene 1,2-Dioxygenase bound to styrene
To be Published
1OZ2
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CRYSTAL STRUCTURE OF 3-MBT REPEATS OF LETHAL (3) MALIGNANT BRAIN TUMOR (NATIVE-II) AT 1.55 ANGSTROM
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Lethal(3)malignant brain tumor-like protein, SULFATE ION
Authors:Wang, W.K, Tereshko, V, Boccuni, P, MacGrogan, D, Nimer, S.D, Patel, D.J.
Deposit date:2003-04-07
Release date:2003-08-19
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Malignant brain tumor repeats: a three-leaved propeller architecture with ligand/peptide binding pockets.
Structure, 11, 2003
1OZ3
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Crystal Structure of 3-MBT repeats of lethal (3) malignant Brain Tumor (Native-I) at 1.85 angstrom
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Lethal(3)malignant brain tumor-like protein, SULFATE ION
Authors:Wang, W.K, Tereshko, V, Boccuni, P, MacGrogan, D, Nimer, S.D, Patel, D.J.
Deposit date:2003-04-07
Release date:2003-08-19
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Malignant brain tumor repeats: a three-leaved propeller architecture with ligand/peptide binding pockets.
Structure, 11, 2003
1S4V
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The 2.0 A crystal structure of the KDEL-tailed cysteine endopeptidase functioning in programmed cell death of Ricinus communis endosperm
Descriptor: DVA-LEU-LYS-0QE peptide, SULFATE ION, cysteine endopeptidase
Authors:Than, M.E, Helm, M, Simpson, D.J, Lottspeich, F, Huber, R, Gietl, C.
Deposit date:2004-01-19
Release date:2004-03-16
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:The 2.0 A crystal structure and substrate specificity of the KDEL-tailed cysteine endopeptidase functioning in programmed cell death of Ricinus communis endosperm.
J.Mol.Biol., 336, 2004
2AQ7
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Structure-activity relationships at the 5-posiiton of thiolactomycin: an intact 5(R)-isoprene unit is required for activity against the condensing enzymes from Mycobacterium tuberculosis and Escherichia coli
Descriptor: (5R)-4-HYDROXY-3,5-DIMETHYL-5-[(1E,3E)-2-METHYLPENTA-1,3-DIENYL]THIOPHEN-2(5H)-ONE, 3-oxoacyl-[acyl-carrier-protein] synthase I
Authors:Kim, P, Zhang, Y.M, Shenoy, G, Nguyen, Q.A, Boshoff, H.I, Manjunatha, U.H, Goodwin, M.B, Lonsdale, J, Price, A.C, Miller, D.J.
Deposit date:2005-08-17
Release date:2006-01-17
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure-Activity Relationships at the 5-Position of Thiolactomycin: An Intact (5R)-Isoprene Unit Is Required for Activity against the Condensing Enzymes from Mycobacterium tuberculosis and Escherichia coli
J.Med.Chem., 49, 2006
2AQY
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(3+1) assembly of three human telomeric DNA repeats into an asymmetrical dimeric G-quadruplex
Descriptor: 5'-D(*GP*(OIP)P*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*T)-3', 5'-D(*TP*AP*GP*GP*GP*(DU))-3'
Authors:Zhang, N, Phan, A.T, Patel, D.J.
Deposit date:2005-08-18
Release date:2006-03-07
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:(3 + 1) Assembly of three human telomeric repeats into an asymmetric dimeric G-quadruplex
J.Am.Chem.Soc., 127, 2005
4HM2
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Naphthalene 1,2-Dioxygenase bound to ethylphenylsulfide
Descriptor: (ethylsulfanyl)benzene, 1,2-ETHANEDIOL, FE (III) ION, ...
Authors:Ferraro, D.J, Ramaswamy, S.
Deposit date:2012-10-17
Release date:2013-10-30
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Naphthalene 1,2-Dioxygenase bound to ethylphenylsulfide
To be Published
4HNO
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High resolution crystal structure of DNA Apurinic/apyrimidinic (AP) endonuclease IV Nfo from Thermatoga maritima
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, MAGNESIUM ION, ...
Authors:Shin, D.S, Hosfield, D.J, Arvai, A.S, Tsutakawa, S.E, Tainer, J.A.
Deposit date:2012-10-20
Release date:2013-01-23
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (0.9194 Å)
Cite:Conserved Structural Chemistry for Incision Activity in Structurally Non-homologous Apurinic/Apyrimidinic Endonuclease APE1 and Endonuclease IV DNA Repair Enzymes.
J.Biol.Chem., 288, 2013
2BES
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BU of 2bes by Molmil
Structure of Mycobacterium tuberculosis Ribose-5-Phosphate Isomerase, RpiB, Rv2465c, in complex with 4-phospho-D-erythronohydroxamic acid.
Descriptor: 4-PHOSPHO-D-ERYTHRONOHYDROXAMIC ACID, CARBOHYDRATE-PHOSPHATE ISOMERASE
Authors:Roos, A.K, Ericsson, D.J, Mowbray, S.L.
Deposit date:2004-11-30
Release date:2004-12-03
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Competitive Inhibitors of Mycobacterium Tuberculosis Ribose-5-Phosphate Isomerase B Reveal New Information About the Reaction Mechanism.
J.Biol.Chem., 280, 2005
1S4E
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BU of 1s4e by Molmil
Pyrococcus furiosus galactokinase in complex with galactose, ADP and magnesium
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Galactokinase, MAGNESIUM ION, ...
Authors:Hartley, A, Glynn, S.E, Barynin, V, Baker, P.J, Sedelnikova, S.E, Verhees, C, de Geus, D, van der Oost, J, Timson, D.J, Reece, R.J, Rice, D.W.
Deposit date:2004-01-16
Release date:2004-04-06
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Substrate specificity and mechanism from the structure of Pyrococcus furiosus galactokinase
J.Mol.Biol., 337, 2004
4HM3
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Naphthalene 1,2-Dioxygenase bound to ethylbenzene
Descriptor: 1,2-ETHANEDIOL, FE (III) ION, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Ferraro, D.J, Ramaswamy, S.
Deposit date:2012-10-17
Release date:2013-10-30
Last modified:2013-12-25
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Naphthalene 1,2-Dioxygenase bound to ethylbenzene
To be Published
2BMQ
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The Crystal Structure of Nitrobenzene Dioxygenase in complex with nitrobenzene
Descriptor: 1,2-ETHANEDIOL, ETHANOL, FE (III) ION, ...
Authors:Friemann, R, Ivkovic-Jensen, M.M, Lessner, D.J, Yu, C, Gibson, D.T, Parales, R.E, Eklund, H, Ramaswamy, S.
Deposit date:2005-03-15
Release date:2005-05-04
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural insight into the dioxygenation of nitroarene compounds: the crystal structure of nitrobenzene dioxygenase.
J. Mol. Biol., 348, 2005
2BMO
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The Crystal Structure of Nitrobenzene Dioxygenase
Descriptor: 1,2-ETHANEDIOL, ETHANOL, FE (III) ION, ...
Authors:Friemann, R, Ivkovic-Jensen, M.M, Lessner, D.J, Yu, C, Gibson, D.T, Parales, R.E, Eklund, H, Ramaswamy, S.
Deposit date:2005-03-15
Release date:2005-05-04
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structural insight into the dioxygenation of nitroarene compounds: the crystal structure of nitrobenzene dioxygenase.
J. Mol. Biol., 348, 2005
2BP5
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BU of 2bp5 by Molmil
MU2 ADAPTIN SUBUNIT (AP50) OF AP2 ADAPTOR (SECOND DOMAIN), COMPLEXED WITH NON-CANONICAL INTERNALIZATION PEPTIDE VEDYEQGLSG
Descriptor: CLATHRIN COAT ASSEMBLY PROTEIN AP50, P2X PURINOCEPTOR 4
Authors:Royle, S.J, Evans, P.R, Owen, D.J, Murrell-Lagnado, R.D.
Deposit date:2005-04-18
Release date:2005-07-06
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Non-Canonical Yxxg-Phi Endocytic Motifs: Recognition by Ap2 and Preferential Utilization in P2X4 Receptors.
J.Cell.Sci, 118, 2005
1SHU
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BU of 1shu by Molmil
Crystal Structure of the von Willebrand factor A domain of human capillary morphogenesis protein 2: an anthrax toxin receptor
Descriptor: Anthrax toxin receptor 2, MAGNESIUM ION
Authors:Lacy, D.B, Wigelsworth, D.J, Scobie, H.M, Young, J.A.T, Collier, R.J.
Deposit date:2004-02-26
Release date:2004-04-13
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal Structure of the von Willebrand factor A domain of human capillary morphogenesis protein 2: an anthrax toxin receptor
Proc.Natl.Acad.Sci.USA, 101, 2004
4FSX
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BU of 4fsx by Molmil
crystal structure of Se-substituted Zea mays ZMET2 in complex with SAH
Descriptor: DNA (cytosine-5)-methyltransferase 1, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Du, J, Patel, D.J.
Deposit date:2012-06-27
Release date:2012-10-17
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Dual Binding of Chromomethylase Domains to H3K9me2-Containing Nucleosomes Directs DNA Methylation in Plants.
Cell(Cambridge,Mass.), 151, 2012
1SNZ
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BU of 1snz by Molmil
Crystal structure of apo human galactose mutarotase
Descriptor: aldose 1-epimerase
Authors:Thoden, J.B, Timson, D.J, Reece, R.J, Holden, H.M.
Deposit date:2004-03-12
Release date:2004-03-30
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Molecular structure of human galactose mutarotase
J.Biol.Chem., 279, 2004
1RU7
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1934 Human H1 Hemagglutinin
Descriptor: hemagglutinin
Authors:Skehel, J.J, Gamblin, S.J, Haire, L.F, Russell, R.J, Stevens, D.J, Xiao, B, Ha, Y, Vasisht, N, Steinhauer, D.A, Daniels, R.S.
Deposit date:2003-12-11
Release date:2004-03-30
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The structure and receptor binding properties of the 1918 influenza hemagglutinin.
Science, 303, 2004
1R1X
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Crystal structure of oxy-human hemoglobin Bassett at 2.15 angstrom
Descriptor: CARBON MONOXIDE, Hemoglobin alpha chain, Hemoglobin beta chain, ...
Authors:Abdulmalik, O, Safo, M.K, Lerner, N.B, Ochotorena, J, Dhaikin, Y, Abraham, D.J, Asakura, T.
Deposit date:2003-09-25
Release date:2003-10-07
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Characterization of hemoglobin bassett (alpha94Asp-->Ala), a variant with very low oxygen affinity
Am.J.Hematol., 77, 2004
1R4X
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Crystal Structure Analys of the Gamma-COPI Appendage domain
Descriptor: Coatomer gamma subunit, MAGNESIUM ION
Authors:Watson, P.J, Frigerio, G, Collins, B.M, Duden, R, Owen, D.J.
Deposit date:2003-10-09
Release date:2003-10-28
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Gamma-COP appendage domain - structure and function
Traffic, 5, 2004

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