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PDB: 1201 件
1L6M
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Neutrophil Gelatinase-associated Lipocalin is a Novel Bacteriostatic Agent that Interferes with Siderophore-mediated Iron Acquisition
分子名称: 2,3-DIHYDROXY-BENZOIC ACID, 2-(2,3-DIHYDROXY-BENZOYLAMINO)-3-HYDROXY-PROPIONIC ACID, FE (III) ION, ...
著者Goetz, D.H, Borregaard, N, Bluhm, M.E, Raymond, K.N, Strong, R.K.
登録日2002-03-11
公開日2003-03-11
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The Neutrophil Lipocalin NGAL is a Bacteriostatic Agent that Interferes with Siderophore-mediated Iron Acquisition
Mol.Cell, 10, 2002
1EKD
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BU of 1ekd by Molmil
NMR AND MOLECULAR MODELING REVEAL THAT DIFFERENT HYDROGEN BONDING PATTERNS ARE POSSIBLE FOR GU PAIRS: ONE HYDROGEN BOND FOR EACH GU PAIR IN R(GGCGUGCC)2 AND TWO FOR EACH GU PAIR IN R(GAGUGCUC)2
分子名称: RNA (5'-R(*GP*GP*CP*GP*UP*GP*CP*C)-3')
著者Chen, X, McDowell, J.A, Kierzek, R, Krugh, T.R, Turner, D.H.
登録日2000-03-07
公開日2000-11-13
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Nuclear magnetic resonance spectroscopy and molecular modeling reveal that different hydrogen bonding patterns are possible for G.U pairs: one hydrogen bond for each G.U pair in r(GGCGUGCC)(2) and two for each G.U pair in r(GAGUGCUC)(2).
Biochemistry, 39, 2000
1KYJ
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Tumor Associated Mucin Motif from CD43 protein
分子名称: 2-acetamido-2-deoxy-alpha-D-galactopyranose, Leukosialin (CD43) fragment
著者Coltart, D.M, Williams, L.J, Glunz, P.W, Sames, D, Kuduk, S.D, Schwarz, J.B, Chen, X.-T, Royyuru, A.K, Danishefsky, S.D, Live, D.H.
登録日2002-02-04
公開日2002-02-20
最終更新日2024-10-09
実験手法SOLUTION NMR
主引用文献Principles of Mucin Architecture: Structural Studies on Synthetic Glycopeptides Bearing Clustered Mono-, Di-, Tri-, and Hexasaccharide Glycodomains
J.Am.Chem.Soc., 124, 2002
5FFL
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Crystal structure of mouse CD300lf at 1.6 Angstroms resolution.
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CD300 antigen-like family member F, ...
著者Nelson, C.A, Fremont, D.H.
登録日2015-12-18
公開日2016-08-31
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.602 Å)
主引用文献Discovery of a proteinaceous cellular receptor for a norovirus.
Science, 353, 2016
1L9L
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GRANULYSIN FROM HUMAN CYTOLYTIC T LYMPHOCYTES
分子名称: 3[N-MORPHOLINO]PROPANE SULFONIC ACID, ETHANOL, Granulysin, ...
著者Anderson, D.H, Sawaya, M.R, Cascio, D, Ernst, W, Krensky, A, Modlin, R, Eisenberg, D.
登録日2002-03-25
公開日2002-11-06
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (0.92 Å)
主引用文献Granulysin Crystal Structure and a Structure-Derived Lytic Mechanism
J.Mol.Biol., 325, 2002
2BUM
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BU of 2bum by Molmil
Crystal Structure Of Wild-Type Protocatechuate 3,4-Dioxygenase from Acinetobacter Sp. ADP1
分子名称: FE (III) ION, HYDROXIDE ION, PROTOCATECHUATE 3,4-DIOXYGENASE ALPHA CHAIN, ...
著者Vetting, M.W, Valley, M.P, D'Argenio, D.A, Ornston, L.N, Lipscomb, J.D, Ohlendorf, D.H.
登録日2005-06-14
公開日2006-09-05
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Biophysical Analyses of Designed and Selected Mutants of Protocatechuate 3,4-Dioxygenase
Annu.Rev.Microbiol., 58, 2004
1YTD
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Crystal structure of a nicotinate phosphoribosyltransferase from Thermoplasma acidophilum, Native Structure
分子名称: nicotinate phosphoribosyltransferase from Thermoplasma acidophilum
著者Shin, D.H, Berkeley Structural Genomics Center (BSGC)
登録日2005-02-10
公開日2005-03-08
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of a nicotinate phosphoribosyltransferase from Thermoplasma acidophilum.
J.Biol.Chem., 280, 2005
1YFV
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STRUCTURE OF (5'-R(GP*GP*CP*GP*AP*GP*CP*C)-3')2 BY 2-D NMR, 1 STRUCTURE
分子名称: RNA (5'-R(GP*GP*CP*GP*AP*GP*CP*C)-3')
著者Santalucia Junior, J, Turner, D.H.
登録日1997-05-17
公開日1997-10-15
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structure of (rGGCGAGCC)2 in solution from NMR and restrained molecular dynamics.
Biochemistry, 32, 1993
1EOC
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CRYSTAL STRUCTURE OF ACINETOBACTER SP. ADP1 PROTOCATECHUATE 3,4-DIOXYGENASE IN COMPLEX WITH 4-NITROCATECHOL
分子名称: 4-NITROCATECHOL, FE (III) ION, PROTOCATECHUATE 3,4-DIOXYGENASE ALPHA CHAIN, ...
著者Vetting, M.W, D'Argenio, D.A, Ornston, L.N, Ohlendorf, D.H.
登録日2000-03-22
公開日2000-08-09
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structure of Acinetobacter strain ADP1 protocatechuate 3, 4-dioxygenase at 2.2 A resolution: implications for the mechanism of an intradiol dioxygenase.
Biochemistry, 39, 2000
1EO2
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CRYSTAL STRUCTURE OF ACINETOBACTER SP. ADP1 PROTOCATECHUATE 3,4-DIOXYGENASE
分子名称: FE (III) ION, PROTOCATECHUATE 3,4-DIOXYGENASE ALPHA CHAIN, PROTOCATECHUATE 3,4-DIOXYGENASE BETA CHAIN
著者Vetting, M.W, D'Argenio, D.A, Ornston, L.N, Ohlendorf, D.H.
登録日2000-03-21
公開日2000-08-09
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structure of Acinetobacter strain ADP1 protocatechuate 3, 4-dioxygenase at 2.2 A resolution: implications for the mechanism of an intradiol dioxygenase.
Biochemistry, 39, 2000
1EYH
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CRYSTAL STRUCTURE OF THE EPSIN N-TERMINAL HOMOLOGY (ENTH) DOMAIN AT 1.56 ANGSTROM RESOLUTION
分子名称: EPSIN
著者Fremont, D.H.
登録日2000-05-06
公開日2000-06-07
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献CRYSTAL STRUCTURE OF THE EPSIN N-TERMINAL HOMOLOGY (ENTH) DOMAIN AT 1.56 ANGSTROM RESOLUTION
To be Published
2BUW
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BU of 2buw by Molmil
Crystal Structure of Protocatechuate 3,4-Dioxygenase from Acinetobacter Sp. ADP1 Mutant R457S in Complex with 4-Hydroxybenzoate
分子名称: FE (III) ION, P-HYDROXYBENZOIC ACID, PROTOCATECHUATE 3,4-DIOXYGENASE ALPHA CHAIN, ...
著者Vetting, M.W, Valley, M.P, D'Argenio, D.A, Ornston, L.N, Lipscomb, J.D, Ohlendorf, D.H.
登録日2005-06-20
公開日2006-10-26
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystallographic Studies of Intradiol Dioxygenases.
Phd Thesis, 2001
1KY6
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AP-2 CLATHRIN ADAPTOR ALPHA-APPENDAGE IN COMPLEX WITH EPSIN DPW PEPTIDE
分子名称: ALPHA-ADAPTIN C, EH DOMAIN BINDING PROTEIN EPSIN, SULFATE ION
著者Brett, T.J, Traub, L.M, Fremont, D.H.
登録日2002-02-03
公開日2002-06-12
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Accessory protein recruitment motifs in clathrin-mediated endocytosis.
Structure, 10, 2002
2C6H
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Crystal structure of YC-17-bound cytochrome P450 PikC (CYP107L1)
分子名称: 4-{[4-(DIMETHYLAMINO)-3-HYDROXY-6-METHYLTETRAHYDRO-2H-PYRAN-2-YL]OXY}-12-ETHYL-3,5,7,11-TETRAMETHYLOXACYCLODODEC-9-ENE-2,8-DIONE, CYTOCHROME P450 MONOOXYGENASE, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Sherman, D.H, Li, S, Yermalitskaya, L.V, Kim, Y, Smith, J.A, Waterman, M.R, Podust, L.M.
登録日2005-11-09
公開日2006-07-03
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献The Structural Basis for Substrate Anchoring, Active Site Selectivity, and Product Formation by P450 Pikc from Streptomyces Venezuelae.
J.Biol.Chem., 281, 2006
2BUQ
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Crystal Structure Of Wild-Type Protocatechuate 3,4-Dioxygenase from Acinetobacter Sp. ADP1 in Complex with Catechol
分子名称: CATECHOL, FE (III) ION, PROTOCATECHUATE 3,4-DIOXYGENASE ALPHA CHAIN, ...
著者Vetting, M.W, Valley, M.P, D'Argenio, D.A, Ornston, L.N, Lipscomb, J.D, Ohlendorf, D.H.
登録日2005-06-17
公開日2006-09-05
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Biophysical Analyses of Designed and Selected Mutants of Protocatechuate 3,4-Dioxygenase
Annu.Rev.Microbiol., 58, 2004
1LI4
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Human S-adenosylhomocysteine hydrolase complexed with neplanocin
分子名称: 3-(6-AMINO-PURIN-9-YL)-5-HYDROXYMETHYL-CYCLOPENTANE-1,2-DIOL, ISOPROPYL ALCOHOL, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
著者Yang, X, Hu, Y, Yin, D.H, Turner, M.A, Wang, M, Borchardt, R.T, Howell, P.L, Kuczera, K, Schowen, R.L.
登録日2002-04-17
公開日2003-05-20
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Catalytic strategy of S-adenosyl-L-homocysteine hydrolase: Transition-state stabilization and the avoidance of abortive reactions
Biochemistry, 42, 2003
5IGH
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BU of 5igh by Molmil
Macrolide 2'-phosphotransferase type I
分子名称: Macrolide 2'-phosphotransferase, SULFATE ION
著者Berghuis, A.M, Fong, D.H.
登録日2016-02-28
公開日2017-04-26
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Structural Basis for Kinase-Mediated Macrolide Antibiotic Resistance.
Structure, 25, 2017
2BUT
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BU of 2but by Molmil
Crystal Structure Of Protocatechuate 3,4-Dioxygenase from Acinetobacter Sp. ADP1 Mutant R457S - APO
分子名称: FE (III) ION, HYDROXIDE ION, PROTOCATECHUATE 3,4-DIOXYGENASE ALPHA CHAIN, ...
著者Vetting, M.W, Valley, M.P, D'Argenio, D.A, Ornston, L.N, Lipscomb, J.D, Ohlendorf, D.H.
登録日2005-06-17
公開日2006-09-05
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Biophysical Analyses of Designed and Selected Mutants of Protocatechuate 3,4-Dioxygenase
Annu.Rev.Microbiol., 58, 2004
5IGV
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Macrolide 2'-phosphotransferase type II - complex with GDP and azithromycin
分子名称: AZITHROMYCIN, CALCIUM ION, GUANOSINE-5'-DIPHOSPHATE, ...
著者Berghuis, A.M, Fong, D.H.
登録日2016-02-28
公開日2017-04-26
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Structural Basis for Kinase-Mediated Macrolide Antibiotic Resistance.
Structure, 25, 2017
2BUY
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BU of 2buy by Molmil
Crystal Structure of Protocatechuate 3,4-Dioxygenase from Acinetobacter Sp. ADP1 Mutant R133H in Complex with Catechol
分子名称: CATECHOL, FE (III) ION, PROTOCATECHUATE 3,4-DIOXYGENASE ALPHA CHAIN, ...
著者Vetting, M.W, Valley, M.P, D'Argenio, D.A, Ornston, L.N, Lipscomb, J.D, Ohlendorf, D.H.
登録日2005-06-20
公開日2006-10-26
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystallographic Studies of Intradiol Dioxygenases.
Phd Thesis, 2001
1EXF
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EXFOLIATIVE TOXIN A
分子名称: EXFOLIATVE TOXIN A, GLYCINE
著者Vath, G.M, Earhart, C.A, Rago, J.V, Kim, M.H, Bohach, G.A, Schlievert, P.M, Ohlendorf, D.H.
登録日1996-10-22
公開日1998-02-25
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The structure of the superantigen exfoliative toxin A suggests a novel regulation as a serine protease.
Biochemistry, 36, 1997
1L2F
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Crystal structure of NusA from Thermotoga maritima: a structure-based role of the N-terminal domain
分子名称: N utilization substance protein A
著者Shin, D.H, Nguyen, H.H, Jancarik, J, Yokota, H, Kim, R, Kim, S.H, Berkeley Structural Genomics Center (BSGC)
登録日2002-02-20
公開日2003-09-23
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of NusA from Thermotoga maritima and functional implication of the N-terminal domain.
Biochemistry, 42, 2003
1LQL
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Crystal structure of OsmC like protein from Mycoplasma pneumoniae
分子名称: osmotical inducible protein C like family
著者Choi, I.-G, Shin, D.H, Brandsen, J, Jancarik, J, Kim, R, Yokota, H, Kim, S.-H, Berkeley Structural Genomics Center (BSGC)
登録日2002-05-10
公開日2003-08-05
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Crystal structure of a stress inducible protein from Mycoplasma pneumoniae at 2.85 A resolution
J.STRUCT.FUNCT.GENOM., 4, 2003
1KYU
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AP-2 CLATHRIN ADAPTOR ALPHA-APPENDAGE IN COMPLEX WITH EPS15 DPF PEPTIDE
分子名称: ALPHA-ADAPTIN C, EPIDERMAL GROWTH FACTOR RECEPTOR SUBSTRATE 15
著者Brett, T.J, Traub, L.M, Fremont, D.H.
登録日2002-02-05
公開日2002-06-12
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Accessory protein recruitment motifs in clathrin-mediated endocytosis.
Structure, 10, 2002
5HAX
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Crystal structure of Chaetomium thermophilum Nup170 NTD-Nup53 complex
分子名称: 1,2-ETHANEDIOL, GLYCEROL, Nucleoporin NUP170, ...
著者Lin, D.H, Mobbs, G, Hoelz, A.
登録日2015-12-31
公開日2016-04-20
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Architecture of the symmetric core of the nuclear pore.
Science, 352, 2016

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