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PDB: 1224 件
7ONE
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BU of 7one by Molmil
Crystal structure of the self-assembled SAKe6BE designer protein
分子名称: SAKe6BE
著者Wouters, S.M.L, Noguchi, H, Velpula, G, Clarke, D.E, Voet, A.R.D, De Feyter, S.
登録日2021-05-25
公開日2022-12-14
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献SAKe: Computationally Designed Modular Protein Building Blocks for Macromolecular Assemblies
To be published
7ONC
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BU of 7onc by Molmil
Crystal structure of the computationally designed SAKe6BE protein
分子名称: SAKe6BE
著者Wouters, S.M.L, Noguchi, H, Velpula, G, Clarke, D.E, Voet, A.R.D, De Feyter, S.
登録日2021-05-25
公開日2022-12-14
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献SAKe: Computationally Designed Modular Protein Building Blocks for Macromolecular Assemblies
To be published
7ONH
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BU of 7onh by Molmil
Crystal structure of the computationally designed SAKe6BE-L3 protein
分子名称: SAKe6BE-L3, SULFATE ION
著者Wouters, S.M.L, Noguchi, H, Velpula, G, Clarke, D.E, Voet, A.R.D, De Feyter, S.
登録日2021-05-25
公開日2022-12-14
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献SAKe: Computationally Designed Modular Protein Building Blocks for Macromolecular Assemblies
To be published
7ON6
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BU of 7on6 by Molmil
Crystal structure of the computationally designed SAKe6AE protein
分子名称: SAKe6AE, SULFATE ION
著者Wouters, S.M.L, Noguchi, H, Clarke, D.E, Voet, A.R.D, De Feyter, S.
登録日2021-05-25
公開日2022-12-14
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献SAKe: Computationally Designed Modular Protein Building Blocks for Macromolecular Assemblies
To be published
7OPV
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BU of 7opv by Molmil
Crystal structure of the computationally designed SAKe6BE-3HH protein, alternative packing
分子名称: SAKe6BE-3HH
著者Wouters, S.M.L, Noguchi, H, Clarke, D.E, Voet, A.R.D, De Feyter, S.
登録日2021-06-01
公開日2022-12-14
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献SAKe: Computationally Designed Modular Protein Building Blocks for Macromolecular Assemblies
To be published
7OP4
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BU of 7op4 by Molmil
Crystal structure of the computationally designed SAKe6BE-3HH protein
分子名称: SAKe6BE-3HH
著者Wouters, S.M.L, Noguchi, H, Clarke, D.E, Voet, A.R.D, De Feyter, S.
登録日2021-05-29
公開日2022-12-14
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献SAKe: Computationally Designed Modular Protein Building Blocks for Macromolecular Assemblies
To be published
1QCN
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BU of 1qcn by Molmil
CRYSTAL STRUCTURE OF FUMARYLACETOACETATE HYDROLASE
分子名称: ACETATE ION, CALCIUM ION, FUMARYLACETOACETATE HYDROLASE, ...
著者Timm, D.E, Mueller, H.A, Bhanumoorthy, P, Harp, J.M, Bunick, G.J.
登録日1999-05-14
公開日2000-06-07
最終更新日2022-12-21
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure and mechanism of a carbon-carbon bond hydrolase.
Structure Fold.Des., 7, 1999
1QQJ
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BU of 1qqj by Molmil
CRYSTAL STRUCTURE OF MOUSE FUMARYLACETOACETATE HYDROLASE REFINED AT 1.55 ANGSTROM RESOLUTION
分子名称: ACETATE ION, CACODYLATE ION, CALCIUM ION, ...
著者Timm, D.E, Mueller, H.A, Bhanumoorthy, P, Harp, J.M, Bunick, G.J.
登録日1999-06-07
公開日2000-06-07
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Crystal structure and mechanism of a carbon-carbon bond hydrolase.
Structure Fold.Des., 7, 1999
1QVS
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BU of 1qvs by Molmil
Crystal Structure of Haemophilus influenzae H9A mutant Holo Ferric ion-Binding Protein A
分子名称: FE (III) ION, Iron-utilization periplasmic protein, PHOSPHATE ION
著者Shouldice, S.R, Skene, R.J, Dougan, D.R, McRee, D.E, Tari, L.W, Schryvers, A.B.
登録日2003-08-28
公開日2003-11-04
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Presence of ferric hydroxide clusters in mutants of Haemophilus influenzae ferric ion-binding protein A
Biochemistry, 42, 2003
1QW0
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BU of 1qw0 by Molmil
Crystal Structure of Haemophilus influenzae N175L mutant Holo Ferric ion-Binding Protein A
分子名称: FE (III) ION, Iron-utilization periplasmic protein, PHOSPHATE ION
著者Shouldice, S.R, Skene, R.J, Dougan, D.R, McRee, D.E, Tari, L.W, Schryvers, A.B.
登録日2003-08-29
公開日2003-11-04
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Presence of ferric hydroxide clusters in mutants of Haemophilus influenzae ferric ion-binding protein A
Biochemistry, 42, 2003
1QJH
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BU of 1qjh by Molmil
Protein Aggregation and Alzheimer's Disease: Crystallographic Analysis of the Phenomenon. Engineered version of the ribosomal protein S6 used as a stable scaffold to study oligomerization.
分子名称: 30S ribosomal protein S6, MAGNESIUM ION
著者Kristensen, O, Otzen, D.E, Oliveberg, M.
登録日1999-06-24
公開日2000-06-29
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Designed protein tetramer zipped together with a hydrophobic Alzheimer homology: a structural clue to amyloid assembly.
Proc. Natl. Acad. Sci. U.S.A., 97, 2000
1R6X
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BU of 1r6x by Molmil
The Crystal Structure of a Truncated Form of Yeast ATP Sulfurylase, Lacking the C-Terminal APS Kinase-like Domain, in complex with Sulfate
分子名称: ATP:sulfate adenylyltransferase, COBALT (II) ION, SULFATE ION
著者Lalor, D.J, Schnyder, T, Saridakis, V, Pilloff, D.E, Dong, A, Tang, H, Leyh, T.S, Pai, E.F.
登録日2003-10-17
公開日2003-11-11
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structural and functional analysis of a truncated form of Saccharomyces cerevisiae ATP sulfurylase: C-terminal domain essential for oligomer formation but not for activity
Protein Eng., 16, 2003
6B8J
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BU of 6b8j by Molmil
Co-structure of human glycogen synthase kinase beta with a selective (5-imidazol-2-yl-4-phenylpyrimidin-2-yl)[2-(2-pyridylamino)ethyl]amine inhibitor
分子名称: CHIR99021, GLYCEROL, Glycogen synthase kinase-3 beta, ...
著者Bussiere, D.E.
登録日2017-10-08
公開日2017-11-08
実験手法X-RAY DIFFRACTION (2.595 Å)
主引用文献Synthesis, Binding Mode, and Antihyperglycemic Activity of Potent and Selective (5-Imidazol-2-yl-4-phenylpyrimidin-2-yl)[2-(2-pyridylamino)ethyl]amine Inhibitors of Glycogen Synthase Kinase 3.
J. Med. Chem., 60, 2017
1R4I
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BU of 1r4i by Molmil
Crystal Structure of Androgen Receptor DNA-Binding Domain Bound to a Direct Repeat Response Element
分子名称: 5'-D(*CP*CP*AP*GP*AP*AP*CP*AP*TP*CP*AP*AP*GP*AP*AP*CP*AP*G)-3', 5'-D(*CP*TP*GP*TP*TP*CP*TP*TP*GP*AP*TP*GP*TP*TP*CP*TP*GP*G)-3', Androgen receptor, ...
著者Shaffer, P.L, Jivan, A, Dollins, D.E, Claessens, F, Gewirth, D.T.
登録日2003-10-06
公開日2004-06-29
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structural basis of androgen receptor binding to selective androgen response elements.
Proc.Natl.Acad.Sci.USA, 101, 2004
6BFX
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BU of 6bfx by Molmil
BACE crystal structure with hydroxy pyrrolidine inhibitor
分子名称: Beta-secretase 1, GLYCEROL, N-{(1S,2S)-3-(3,5-difluorophenyl)-1-[(3R,5S,6R)-6-(2,2-dimethylpropoxy)-5-methylmorpholin-3-yl]-1-hydroxypropan-2-yl}acetamide
著者Timm, D.E.
登録日2017-10-27
公開日2017-11-15
最終更新日2017-12-27
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Optimization of Hydroxyethylamine Transition State Isosteres as Aspartic Protease Inhibitors by Exploiting Conformational Preferences.
J. Med. Chem., 60, 2017
1R6T
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BU of 1r6t by Molmil
crystal structure of human tryptophanyl-tRNA synthetase
分子名称: GLYCEROL, TRYPTOPHANYL-5'AMP, Tryptophanyl-tRNA synthetase
著者Yang, X.-L, Otero, F.J, Skene, R.J, McRee, D.E, Ribas de Pouplana, L, Schimmel, P.
登録日2003-10-16
公開日2004-01-06
最終更新日2021-10-27
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structures that suggest late development of genetic code components for differentiating aromatic side chains
Proc.Natl.Acad.Sci.USA, 100, 2003
6BFE
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BU of 6bfe by Molmil
BACE crystal structure with hydroxy pyrrolidine inhibitor
分子名称: Beta-secretase 1, GLYCEROL, N-[(1R,2S)-1-[(2R,4R)-4-(cyclohexylmethoxy)pyrrolidin-2-yl]-3-(3,5-difluorophenyl)-1-hydroxypropan-2-yl]acetamide
著者Timm, D.E.
登録日2017-10-26
公開日2017-11-15
最終更新日2017-12-27
実験手法X-RAY DIFFRACTION (1.51 Å)
主引用文献Optimization of Hydroxyethylamine Transition State Isosteres as Aspartic Protease Inhibitors by Exploiting Conformational Preferences.
J. Med. Chem., 60, 2017
5FOT
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BU of 5fot by Molmil
HUMANISED MONOMERIC RADA IN COMPLEX WITH FHTU TETRAPEPTIDE
分子名称: DNA REPAIR AND RECOMBINATION PROTEIN RADA, FHTU PEPTIDE, PHOSPHATE ION
著者Scott, D.E, Marsh, M, Blundell, T.L, Abell, C, Hyvonen, M.
登録日2015-11-26
公開日2016-03-30
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.189 Å)
主引用文献Structure Activity Relationship of the Peptide Binding Motif Mediating the Rad51:Brca2 Protein-Protein Interaction.
FEBS Lett., 590, 2016
1P8F
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BU of 1p8f by Molmil
A four location model to explain the stereospecificity of proteins.
分子名称: GLYCEROL, ISOCITRIC ACID, Isocitrate dehydrogenase [NADP], ...
著者Mesecar, A.D, Koshland Jr, D.E.
登録日2003-05-07
公開日2003-05-20
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural biology: A new model for protein stereospecificity.
Nature, 403, 2000
4TNJ
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BU of 4tnj by Molmil
RT XFEL structure of Photosystem II 500 ms after the 2nd illumination (2F) at 4.5 A resolution
分子名称: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
著者Kern, J, Tran, R, Alonso-Mori, R, Koroidov, S, Echols, N, Hattne, J, Ibrahim, M, Gul, S, Laksmono, H, Sierra, R.G, Gildea, R.J, Han, G, Hellmich, J, Lassalle-Kaiser, B, Chatterjee, R, Brewster, A, Stan, C.A, Gloeckner, C, Lampe, A, DiFiore, D, Milathianaki, D, Fry, A.R, Seibert, M.M, Koglin, J.E, Gallo, E, Uhlig, J, Sokaras, D, Weng, T.-C, Zwart, P.H, Skinner, D.E, Bogan, M.J, Messerschmidt, M, Glatzel, P, Williams, G.J, Boutet, S, Adams, P.D, Zouni, A, Messinger, J, Sauter, N.K, Bergmann, U, Yano, J, Yachandra, V.K.
登録日2014-06-04
公開日2014-07-09
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (4.5 Å)
主引用文献Taking snapshots of photosynthetic water oxidation using femtosecond X-ray diffraction and spectroscopy.
Nat Commun, 5, 2014
5FOU
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BU of 5fou by Molmil
HUMANISED MONOMERIC RADA IN COMPLEX WITH FHPA TETRAPEPTIDE
分子名称: DNA REPAIR AND RECOMBINATION PROTEIN RADA, FHPA PEPTIDE, PHOSPHATE ION
著者Scott, D.E, Marsh, M, Blundell, T.L, Abell, C, Hyvonen, M.
登録日2015-11-26
公開日2016-03-30
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structure Activity Relationship of the Peptide Binding Motif Mediating the Rad51:Brca2 Protein-Protein Interaction.
FEBS Lett., 590, 2016
5FOV
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BU of 5fov by Molmil
HUMANISED MONOMERIC RADA IN COMPLEX WITH FHTG TETRAPEPTIDE
分子名称: DNA repair and recombination protein RadA, FHTG PEPTIDE, GLYCEROL, ...
著者Scott, D.E, Marsh, M, Blundell, T.L, Abell, C, Hyvonen, M.
登録日2015-11-26
公開日2016-03-30
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.739 Å)
主引用文献Structure Activity Relationship of the Peptide Binding Motif Mediating the Rad51:Brca2 Protein-Protein Interaction.
FEBS Lett., 590, 2016
1P1V
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BU of 1p1v by Molmil
Crystal Structure of FALS-associated human Copper-Zinc Superoxide Dismutase (CuZnSOD) Mutant D125H to 1.4A
分子名称: SULFATE ION, Superoxide dismutase [Cu-Zn], ZINC ION
著者Elam, J.S, Malek, K, Rodriguez, J.A, Doucette, P.A, Taylor, A.B, Hayward, L.J, Cabelli, D.E, Valentine, J.S, Hart, P.J.
登録日2003-04-14
公開日2003-08-26
最終更新日2021-10-27
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献An Alternative Mechanism of Bicarbonate-mediated Peroxidation by Copper-Zinc Superoxide Dismutase: RATES ENHANCED VIA PROPOSED ENZYME-ASSOCIATED PEROXYCARBONATE INTERMEDIATE
J.Biol.Chem., 278, 2003
6BFD
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BU of 6bfd by Molmil
BACE crystal structure with hydroxy pyrrolidine inhibitor
分子名称: 2-{[(2S)-butan-2-yl]amino}-N-{(1R,2S)-1-hydroxy-3-phenyl-1-[(2R)-pyrrolidin-2-yl]propan-2-yl}-6-(methylsulfonyl)pyridine-4-carboxamide, Beta-secretase 1, GLYCEROL
著者Timm, D.E.
登録日2017-10-26
公開日2017-11-15
最終更新日2017-12-27
実験手法X-RAY DIFFRACTION (1.62 Å)
主引用文献Optimization of Hydroxyethylamine Transition State Isosteres as Aspartic Protease Inhibitors by Exploiting Conformational Preferences.
J. Med. Chem., 60, 2017
6BFW
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BU of 6bfw by Molmil
BACE crystal structure with hydroxy morpholine inhibitor
分子名称: Beta-secretase 1, GLYCEROL, N-[(1S,2S)-1-[(3R,6R)-6-(cyclohexylmethoxy)morpholin-3-yl]-3-(3,5-difluorophenyl)-1-hydroxypropan-2-yl]acetamide
著者Timm, D.E.
登録日2017-10-27
公開日2017-11-15
最終更新日2017-12-27
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Optimization of Hydroxyethylamine Transition State Isosteres as Aspartic Protease Inhibitors by Exploiting Conformational Preferences.
J. Med. Chem., 60, 2017

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件を2024-09-11に公開中

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