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PDB: 1158 件

1BRF
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Rubredoxin (Wild Type) from Pyrococcus Furiosus
分子名称: FE (III) ION, PROTEIN (RUBREDOXIN)
著者Bau, R, Rees, D.C, Kurtz, D.M, Scott, R.A, Huang, H, Adams, M.W.W, Eidsness, M.K.
登録日1998-08-24
公開日1998-09-02
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (0.95 Å)
主引用文献Crystal Structure of Rubredoxin from Pyrococcus Furiosus at 0.95 Angstroms Resolution, and the structures of N-terminal methionine and formylmethionine variants of Pf Rd. Contributions of N-terminal interactions to thermostability
J.BIOL.INORG.CHEM., 3, 1998
1G1M
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ALL-FERROUS NITROGENASE IRON PROTEIN FROM AZOTOBACTER VINELANDII
分子名称: IRON/SULFUR CLUSTER, NITROGENASE IRON PROTEIN
著者Strop, P, Takahara, P.M, Chiu, H.-J, Angove, H.C, Burgess, B.K, Rees, D.C.
登録日2000-10-12
公開日2001-01-31
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Crystal structure of the all-ferrous [4Fe-4S]0 form of the nitrogenase iron protein from Azotobacter vinelandii.
Biochemistry, 40, 2001
1G5C
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CRYSTAL STRUCTURE OF THE 'CAB' TYPE BETA CLASS CARBONIC ANHYDRASE FROM METHANOBACTERIUM THERMOAUTOTROPHICUM
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, BETA-CARBONIC ANHYDRASE, CALCIUM ION, ...
著者Strop, P, Smith, K.S, Iverson, T.M, Ferry, J.G, Rees, D.C.
登録日2000-10-31
公開日2001-04-04
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of the "cab"-type beta class carbonic anhydrase from the archaeon Methanobacterium thermoautotrophicum.
J.Biol.Chem., 276, 2001
1GGU
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HUMAN FACTOR XIII WITH CALCIUM BOUND IN THE ION SITE
分子名称: CALCIUM ION, PROTEIN (COAGULATION FACTOR XIII)
著者Fox, B.A, Yee, V.C, Pederson, L.C, Trong, I.L, Bishop, P.D, Stenkamp, R.E, Teller, D.C.
登録日1998-07-22
公開日1999-09-16
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Identification of the calcium binding site and a novel ytterbium site in blood coagulation factor XIII by x-ray crystallography.
J.Biol.Chem., 274, 1999
1G8A
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PYROCOCCUS HORIKOSHII FIBRILLARIN PRE-RRNA PROCESSING PROTEIN
分子名称: FIBRILLARIN-LIKE PRE-RRNA PROCESSING PROTEIN
著者Boisvert, D.C, Kim, S.H, Berkeley Structural Genomics Center (BSGC)
登録日2000-11-16
公開日2003-10-14
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献A Structural Approach to Gene Function and Structure Quality for Pyrococcus horikoshii Fibrillarin
To be Published
1G21
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MGATP-BOUND AND NUCLEOTIDE-FREE STRUCTURES OF A NITROGENASE PROTEIN COMPLEX BETWEEN LEU127DEL-FE PROTEIN AND THE MOFE PROTEIN
分子名称: 3-HYDROXY-3-CARBOXY-ADIPIC ACID, ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, ...
著者Chiu, H.-J, Peters, J.W, Lanzilotta, W.N, Ryle, M.J, Seefeldt, L.C, Howard, J.B, Rees, D.C.
登録日2000-10-16
公開日2001-01-31
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献MgATP-Bound and nucleotide-free structures of a nitrogenase protein complex between the Leu 127 Delta-Fe-protein and the MoFe-protein.
Biochemistry, 40, 2001
1GN9
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Hybrid Cluster Protein from Desulfovibrio desulfuricans ATCC 27774 X-ray structure at 2.6A resolution using synchrotron radiation at a wavelength of 1.722A
分子名称: HYBRID CLUSTER PROTEIN, IRON/SULFUR CLUSTER, IRON/SULFUR/OXYGEN HYBRID CLUSTER
著者Macedo, S, Mitchell, E.P, Romao, C.V, Cooper, S.J, Coelho, R, Liu, M.Y, Xavier, A.V, Legall, J, Bailey, S, Garner, D.C, Hagen, W.R, Teixeira, M, Carrondo, M.A, Lindley, P.
登録日2001-10-04
公開日2002-04-11
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Hybrid Cluster Proteins (Hcps) from Desulfovibrio Desulfuricans Atcc 27774 and Desulfovibrio Vulgaris (Hildenborough): X-Ray Structures at 1.25 A Resolution Using Synchrotron Radiation.
J.Biol.Inorg.Chem., 7, 2002
7UPQ
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Crystal structure of designed heterotrimeric assembly DHT03_1arm_A21/B/C
分子名称: DHT03 protein A, DHT03 protein B, DHT03 protein C
著者Chang, Y, Bhabha, G, Ekiert, D.C.
登録日2022-04-16
公開日2022-12-14
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.35 Å)
主引用文献De novo design of obligate ABC-type heterotrimeric proteins.
Nat.Struct.Mol.Biol., 29, 2022
7UJX
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Structure of cAMP-dependent protein kinase using a MD-MX procedure, produced using 2.4 Angstrom data
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PHOSPHATE ION, ...
著者Wych, D.C, Aoto, P.C, Wall, M.E.
登録日2022-03-31
公開日2022-12-07
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Molecular-dynamics simulation methods for macromolecular crystallography.
Acta Crystallogr D Struct Biol, 79, 2023
7UPO
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BU of 7upo by Molmil
Crystal structure of designed heterotrimeric assembly DHT03
分子名称: DHT03 protein A, DHT03 protein B, DHT03 protein C
著者Chang, Y, Bhabha, G, Ekiert, D.C.
登録日2022-04-16
公開日2022-12-14
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献De novo design of obligate ABC-type heterotrimeric proteins.
Nat.Struct.Mol.Biol., 29, 2022
7UPP
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BU of 7upp by Molmil
Crystal structure of designed heterotrimeric assembly DHT03_2arm_A21/B21/C long
分子名称: DHT03 protein A, DHT03 protein B, DHT03 protein C
著者Chang, Y, Bhabha, G, Ekiert, D.C.
登録日2022-04-16
公開日2022-12-14
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.35 Å)
主引用文献De novo design of obligate ABC-type heterotrimeric proteins.
Nat.Struct.Mol.Biol., 29, 2022
7V0G
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BU of 7v0g by Molmil
Structure of cAMP-dependent protein kinase using a MD-MX procedure, produced using 1.63 Angstrom data
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PHOSPHATE ION, ...
著者Wych, D.C, Aoto, P.C, Wall, M.E.
登録日2022-05-10
公開日2022-12-07
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献Molecular-dynamics simulation methods for macromolecular crystallography.
Acta Crystallogr D Struct Biol, 79, 2023
7TQC
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BU of 7tqc by Molmil
Selenium-incorporated nitrogenase Fe protein (Av2-Se) from A. vinelandii (22 mM KSeCN)
分子名称: ADENOSINE-5'-DIPHOSPHATE, Fe4-Se4 cluster, IRON/SULFUR CLUSTER, ...
著者Buscagan, T.M, Kaiser, J.T, Rees, D.C.
登録日2022-01-26
公開日2022-09-14
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献Selenocyanate derived Se-incorporation into the Nitrogenase Fe protein cluster.
Elife, 11, 2022
7TQF
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BU of 7tqf by Molmil
Selenium-incorporated nitrogenase Fe protein (Av2-Se) from A. vinelandii (22 mM KSeCN)
分子名称: ADENOSINE-5'-DIPHOSPHATE, Fe4-Se4 cluster, IRON/SULFUR CLUSTER, ...
著者Buscagan, T.M, Kaiser, J.T, Rees, D.C.
登録日2022-01-26
公開日2022-09-14
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Selenocyanate derived Se-incorporation into the Nitrogenase Fe protein cluster.
Elife, 11, 2022
7TPO
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BU of 7tpo by Molmil
Selenium-incorporated nitrogenase Fe-protein (Av2-Se) from A. vinelandii (1 mM KSeCN)
分子名称: ADENOSINE-5'-DIPHOSPHATE, Fe4-Se4 cluster, IRON/SULFUR CLUSTER, ...
著者Buscagan, T.M, Kaiser, J.T, Rees, D.C.
登録日2022-01-25
公開日2022-09-14
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Selenocyanate derived Se-incorporation into the Nitrogenase Fe protein cluster.
Elife, 11, 2022
7TQK
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BU of 7tqk by Molmil
Selenium-incorporated nitrogenase Fe protein (Av2-Se) from A. vinelandii (1 mM KSeCN)
分子名称: ADENOSINE-5'-DIPHOSPHATE, Fe4-Se4 cluster, IRON/SULFUR CLUSTER, ...
著者Buscagan, T.M, Kaiser, J.T, Rees, D.C.
登録日2022-01-26
公開日2022-09-14
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Selenocyanate derived Se-incorporation into the Nitrogenase Fe protein cluster.
Elife, 11, 2022
7TQH
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BU of 7tqh by Molmil
Selenium-incorporated nitrogenase Fe protein (Av2-Se) from A. vinelandii (11 mM KSeCN)
分子名称: ADENOSINE-5'-DIPHOSPHATE, Fe4-Se4 cluster, IRON/SULFUR CLUSTER, ...
著者Buscagan, T.M, Kaiser, J.T, Rees, D.C.
登録日2022-01-26
公開日2022-09-14
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献Selenocyanate derived Se-incorporation into the Nitrogenase Fe protein cluster.
Elife, 11, 2022
7UDK
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BU of 7udk by Molmil
Crystal structure of designed helical repeat protein RPB_LRP2_R4 bound to LRPx4 peptide
分子名称: 4xLRP, Designed helical repeat protein (DHR) RPB_LRP2_R4
著者Chang, Y, Redler, R.L, Bhabha, G, Ekiert, D.C.
登録日2022-03-20
公開日2023-03-22
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.18 Å)
主引用文献De novo design of modular peptide-binding proteins by superhelical matching.
Nature, 616, 2023
7UDL
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BU of 7udl by Molmil
Crystal structure of designed helical repeat protein RPB_PLP1_R6 bound to PLPx6 peptide
分子名称: 1,2-ETHANEDIOL, 6xPLP Peptide, Designed helical repeat protein (DHR) RPB_PLP1_R6
著者Chang, Y, Redler, R.L, Bhabha, G, Ekiert, D.C.
登録日2022-03-20
公開日2023-03-22
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献De novo design of modular peptide-binding proteins by superhelical matching.
Nature, 616, 2023
7UDN
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Crystal structure of designed helical repeat protein RPB_PLP1_R6 in alternative conformation 2
分子名称: Designed helical repeat protein (DHR) RPB_PLP1_R6
著者Chang, Y, Redler, R.L, Bhabha, G, Ekiert, D.C.
登録日2022-03-20
公開日2023-03-22
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献De novo design of modular peptide-binding proteins by superhelical matching.
Nature, 616, 2023
7UDM
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BU of 7udm by Molmil
Crystal structure of designed helical repeat protein RPB_PLP1_R6 in alternative conformation 1 (with peptide)
分子名称: 6xPLP, Designed helical repeat protein (DHR) RPB_PLP1_R6
著者Chang, Y, Redler, R.L, Bhabha, G, Ekiert, D.C.
登録日2022-03-20
公開日2023-03-22
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献De novo design of modular peptide-binding proteins by superhelical matching.
Nature, 616, 2023
7UDO
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BU of 7udo by Molmil
Crystal structure of designed helical repeat protein RPB_LRP2_R4 (proteolysis fragment?), forming pseudopolymeric filaments
分子名称: 1,2-ETHANEDIOL, Designed helical repeat protein (DHR) RPB_LRP2_R4, PHOSPHATE ION
著者Redler, R.L, Chang, Y, Bhabha, G, Ekiert, D.C.
登録日2022-03-20
公開日2023-03-22
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献De novo design of modular peptide-binding proteins by superhelical matching.
Nature, 616, 2023
7UE2
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BU of 7ue2 by Molmil
Crystal structure of designed helical repeat protein RPB_PLP3_R6 bound to PLPx6 peptide
分子名称: PLPx6 peptide, RPB_PLP3_R6
著者Chang, Y, Ekiert, D.C, Bhabha, G.
登録日2022-03-21
公開日2023-03-29
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.68 Å)
主引用文献De novo design of modular peptide-binding proteins by superhelical matching.
Nature, 616, 2023
7T4H
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BU of 7t4h by Molmil
Selenium-incorporated nitrogenase Fe protein (Av2-Se) from A. vinelandii (22 mM KSeCN, with Av1)
分子名称: ADENOSINE-5'-DIPHOSPHATE, Fe4-Se4 cluster, IRON/SULFUR CLUSTER, ...
著者Buscagan, T.M, Kaiser, J.T, Rees, D.C.
登録日2021-12-09
公開日2022-09-14
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.51 Å)
主引用文献Selenocyanate derived Se-incorporation into the Nitrogenase Fe protein cluster.
Elife, 11, 2022
7TPZ
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BU of 7tpz by Molmil
Selenium-free nitrogenase Fe protein (Av2) from A. vinelandii (nucleotide control)
分子名称: ADENOSINE-5'-DIPHOSPHATE, IRON/SULFUR CLUSTER, MAGNESIUM ION, ...
著者Buscagan, T.M, Kaiser, J.T, Rees, D.C.
登録日2022-01-26
公開日2022-09-14
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献Selenocyanate derived Se-incorporation into the Nitrogenase Fe protein cluster.
Elife, 11, 2022

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件を2024-08-07に公開中

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